MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 131457 bp
Accession: NZ_CP040643 Location: 277095..408551 Organism: Escherichia coli strain BE104 Replicon: chromosome
Accession: NZ_CP040643 Location: 277095..408551 Organism: Escherichia coli strain BE104 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FGC38_RS01330 () | 272863..273954 | + | 1092 | Protein_258 | group II intron reverse transcriptase/maturase | - |
| FGC38_RS01335 () | 274102..275082 | - | 981 | WP_000019403.1 | IS5-like element IS5 family transposase | - |
| FGC38_RS01340 () | 275326..276729 | + | 1404 | WP_001393629.1 | S-methylmethionine permease | - |
| FGC38_RS01345 () | 276716..277648 | + | 933 | WP_000081352.1 | homocysteine S-methyltransferase | - |
| FGC38_RS01350 () | 277757..278803 | - | 1047 | WP_000192349.1 | ferric ABC transporter ATP-binding protein | - |
| FGC38_RS01355 () | 278815..279162 | - | 348 | Protein_263 | ABC transporter permease subunit | - |
| FGC38_RS01360 () | 279179..279876 | - | 698 | Protein_264 | IS1 family transposase | - |
| FGC38_RS01365 () | 279932..280105 | + | 174 | Protein_265 | IS30 family transposase | - |
| FGC38_RS01370 () | 280115..280363 | - | 249 | Protein_266 | transposase | - |
| FGC38_RS01375 () | 280386..280736 | - | 351 | WP_001030800.1 | type IV toxin-antitoxin system antitoxin YagB | - |
| FGC38_RS01380 () | 280830..281984 | - | 1155 | WP_010723086.1 | IS481-like element ISEc19 family transposase | - |
| FGC38_RS01385 () | 282279..283187 | + | 909 | WP_001136613.1 | 2-keto-3-deoxygluconate aldolase | - |
| FGC38_RS01390 () | 283202..285169 | + | 1968 | WP_000151261.1 | xylonate dehydratase YagF | - |
| FGC38_RS01395 () | 285396..286778 | + | 1383 | WP_000192863.1 | MFS transporter | - |
| FGC38_RS01400 () | 286790..288400 | + | 1611 | WP_000406871.1 | glycoside hydrolase family 43 protein | - |
| FGC38_RS01405 () | 288405..289163 | - | 759 | WP_001121657.1 | DNA-binding transcriptional repressor XynR | - |
| FGC38_RS01410 () | 289302..290306 | - | 1005 | WP_001281825.1 | ornithine carbamoyltransferase | - |
| FGC38_RS23465 () | 290276..290371 | - | 96 | WP_211180486.1 | putative translational regulatory protein ArgL | - |
| FGC38_RS01415 () | 290430..290633 | + | 204 | Protein_276 | DUF3987 domain-containing protein | - |
| FGC38_RS01420 () | 290650..291347 | - | 698 | Protein_277 | IS1 family transposase | - |
| FGC38_RS01425 () | 291402..292232 | + | 831 | Protein_278 | type III restriction endonuclease subunit R | - |
| FGC38_RS01430 () | 292323..292949 | - | 627 | WP_000860996.1 | inovirus Gp2 family protein | - |
| FGC38_RS01435 () | 293221..293919 | - | 699 | WP_001214248.1 | recombinase family protein | - |
| FGC38_RS01440 () | 293946..294800 | - | 855 | WP_000072039.1 | hypothetical protein | - |
| FGC38_RS01445 () | 294919..295143 | - | 225 | WP_001272156.1 | helix-turn-helix domain-containing protein | - |
| FGC38_RS01450 () | 295140..295580 | - | 441 | WP_000224818.1 | hypothetical protein | - |
| FGC38_RS01455 () | 295697..297097 | - | 1401 | WP_001407714.1 | integrase family protein | - |
| FGC38_RS01465 () | 297382..297720 | - | 339 | Protein_285 | LysR family transcriptional regulator | - |
| FGC38_RS01470 () | 297771..298727 | - | 957 | WP_000121359.1 | molybdenum cofactor insertion chaperone PaoD | - |
| FGC38_RS01475 () | 298737..300935 | - | 2199 | WP_000667026.1 | aldehyde oxidoreductase molybdenum-binding subunit PaoC | - |
| FGC38_RS01480 () | 300932..301888 | - | 957 | WP_000643333.1 | aldehyde oxidoreductase FAD-binding subunit PaoB | - |
| FGC38_RS01485 () | 301885..302574 | - | 690 | WP_000070700.1 | aldehyde dehydrogenase iron-sulfur subunit | - |
| FGC38_RS01490 () | 302992..303606 | + | 615 | WP_001019920.1 | YagU family protein | - |
| FGC38_RS01495 () | 303854..304183 | - | 330 | WP_001303809.1 | YkgJ family cysteine cluster protein | - |
| FGC38_RS01500 () | 304496..305206 | - | 711 | WP_001350485.1 | fimbrial chaperone EcpE | - |
| FGC38_RS01505 () | 305175..306818 | - | 1644 | WP_001310578.1 | fimbrial adhesin EcpD | - |
| FGC38_RS01510 () | 306808..309333 | - | 2526 | WP_001131096.1 | fimbrial usher EcpC | - |
| FGC38_RS01515 () | 309359..310027 | - | 669 | WP_000716398.1 | fimbrial chaperone EcpB | - |
| FGC38_RS01520 () | 310085..310672 | - | 588 | WP_000730972.1 | common pilus major fimbrillin subunit EcpA | - |
| FGC38_RS01525 () | 310747..311289 | - | 543 | WP_001301257.1 | ECP biosynthesis operon DNA-binding transcriptional regulator EcpR | - |
| FGC38_RS01530 () | 312113..312340 | + | 228 | WP_001147279.1 | hypothetical protein | - |
| FGC38_RS01535 () | 312375..312515 | - | 141 | WP_000866436.1 | type B 50S ribosomal protein L36 | - |
| FGC38_RS01540 () | 312515..312778 | - | 264 | WP_000803998.1 | type B 50S ribosomal protein L31 | - |
| FGC38_RS01545 () | 313142..313243 | - | 102 | WP_000662258.1 | hypothetical protein | - |
| FGC38_RS01555 () | 314358..315233 | + | 876 | Protein_302 | inverse autotransporter beta domain-containing protein | - |
| FGC38_RS01560 () | 315292..316454 | + | 1163 | WP_085947771.1 | IS3-like element IS3 family transposase | - |
| FGC38_RS01565 () | 316554..317716 | + | 1163 | WP_085955200.1 | IS3 family transposase | - |
| FGC38_RS01570 () | 317772..319058 | + | 1287 | Protein_305 | IS66 family transposase | - |
| FGC38_RS01580 () | 320389..320538 | + | 150 | Protein_307 | transposase domain-containing protein | - |
| FGC38_RS01585 () | 320599..320952 | + | 354 | Protein_308 | IS3 family transposase | - |
| FGC38_RS01590 () | 321492..322184 | - | 693 | WP_000286435.1 | hypothetical protein | - |
| FGC38_RS01600 () | 322937..325843 | - | 2907 | WP_064753882.1 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| FGC38_RS01605 () | 328882..332997 | - | 4116 | WP_000995793.1 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| FGC38_RS01610 () | 333718..334664 | + | 947 | Protein_312 | omptin family outer membrane protease OmpP | - |
| FGC38_RS01615 () | 334769..336256 | + | 1488 | WP_072145210.1 | alpha/beta hydrolase | - |
| FGC38_RS01620 () | 336632..336892 | + | 261 | Protein_314 | hypothetical protein | - |
| FGC38_RS01625 () | 337013..337753 | + | 741 | WP_001066941.1 | tyrosine-type recombinase/integrase | - |
| FGC38_RS01630 () | 338038..339015 | - | 978 | WP_000361610.1 | RepB family plasmid replication initiator protein | - |
| FGC38_RS01640 () | 339855..340496 | - | 642 | WP_000990665.1 | hypothetical protein | - |
| FGC38_RS01650 () | 342611..342901 | + | 291 | WP_000538310.1 | hypothetical protein | - |
| FGC38_RS01655 () | 342891..343790 | + | 900 | WP_000963206.1 | nucleotide-binding protein | - |
| FGC38_RS01660 () | 343840..346065 | - | 2226 | WP_000698737.1 | phage T7 exclusion protein | - |
| FGC38_RS01665 () | 346067..347155 | - | 1089 | WP_000952217.1 | transcriptional repressor PifC | - |
| FGC38_RS01670 () | 347735..347953 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| FGC38_RS01675 () | 347955..348260 | + | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| FGC38_RS01680 () | 348261..349067 | + | 807 | WP_000016982.1 | site-specific integrase | - |
| FGC38_RS01695 () | 351228..351932 | + | 705 | WP_175404159.1 | replication initiation protein RepE | - |
| FGC38_RS01700 () | 352520..353686 | + | 1167 | WP_000772446.1 | plasmid-partitioning protein SopA | - |
| FGC38_RS01705 () | 353686..354657 | + | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| FGC38_RS01720 () | 355610..356511 | + | 902 | Protein_329 | DUF1281 domain-containing protein | - |
| FGC38_RS01725 () | 356515..356820 | + | 306 | WP_010892536.1 | hypothetical protein | - |
| FGC38_RS01730 () | 356897..357580 | + | 684 | WP_000085939.1 | DNA methylase | - |
| FGC38_RS01735 () | 357581..357802 | + | 222 | WP_001104904.1 | hypothetical protein | - |
| FGC38_RS01740 () | 357696..358250 | + | 555 | WP_001358893.1 | DUF1380 family protein | - |
| FGC38_RS23340 () | 358296..359072 | + | 777 | WP_001005032.1 | hypothetical protein | - |
| FGC38_RS01755 () | 359609..359911 | + | 303 | WP_072095193.1 | antirestriction protein | - |
| FGC38_RS01760 () | 359958..360380 | + | 423 | WP_000271685.1 | DUF1380 family protein | - |
| FGC38_RS01765 () | 360377..360568 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| FGC38_RS01785 () | 361374..361913 | + | 540 | WP_000290801.1 | single-stranded DNA-binding protein | - |
| FGC38_RS01790 () | 361970..362203 | + | 234 | WP_000005990.1 | DUF905 family protein | - |
| FGC38_RS01795 () | 362269..364227 | + | 1959 | WP_000117173.1 | ParB/RepB/Spo0J family partition protein | - |
| FGC38_RS01800 () | 364282..364716 | + | 435 | WP_000845928.1 | conjugation system SOS inhibitor PsiB | - |
| FGC38_RS01805 () | 364713..365432 | + | 720 | WP_000116348.1 | plasmid SOS inhibition protein A | - |
| - () | 365444..365642 | + | 199 | NuclAT_1 | - | Antitoxin Detail |
| - () | 365444..365642 | + | 199 | NuclAT_1 | - | Antitoxin Detail |
| - () | 365444..365642 | + | 199 | NuclAT_1 | - | Antitoxin Detail |
| - () | 365444..365642 | + | 199 | NuclAT_1 | - | Antitoxin Detail |
| FGC38_RS01810 () | 365707..365865 | + | 159 | WP_001302184.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| FGC38_RS23345 () | 366103..366462 | - | 360 | Protein_344 | hypothetical protein | - |
| FGC38_RS23350 () | 366532..366738 | + | 207 | WP_000547965.1 | hypothetical protein | - |
| FGC38_RS01820 () | 366763..367050 | + | 288 | WP_000107542.1 | hypothetical protein | - |
| FGC38_RS01825 () | 367169..367990 | + | 822 | WP_001234417.1 | DUF945 domain-containing protein | - |
| FGC38_RS01830 () | 368286..368888 | - | 603 | WP_077763528.1 | transglycosylase SLT domain-containing protein | - |
| FGC38_RS01835 () | 369209..369592 | + | 384 | WP_001151527.1 | relaxosome protein TraM | - |
| FGC38_RS01840 () | 369779..370468 | + | 690 | WP_000283385.1 | conjugal transfer transcriptional regulator TraJ | - |
| FGC38_RS01845 () | 370567..370962 | + | 396 | WP_001309237.1 | conjugal transfer relaxosome protein TraY | - |
| FGC38_RS01850 () | 370995..371360 | + | 366 | WP_000994779.1 | type IV conjugative transfer system pilin TraA | - |
| FGC38_RS01855 () | 371375..371686 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| FGC38_RS01860 () | 371708..372274 | + | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| FGC38_RS01865 () | 372285..372989 | + | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
| FGC38_RS01870 () | 372989..374416 | + | 1428 | WP_000146685.1 | conjugal transfer protein TraB | - |
| FGC38_RS01875 () | 374406..374996 | + | 591 | WP_000002792.1 | conjugal transfer protein TraP | - |
| FGC38_RS01880 () | 374950..375180 | + | 231 | WP_071587746.1 | conjugal transfer protein TrbD | - |
| FGC38_RS01885 () | 375192..375443 | + | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
| FGC38_RS01890 () | 375440..375955 | + | 516 | WP_010892541.1 | type IV conjugative transfer system lipoprotein TraV | - |
| FGC38_RS01895 () | 376090..376311 | + | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| FGC38_RS01900 () | 376471..379098 | + | 2628 | WP_001064243.1 | type IV secretion system protein TraC | - |
| FGC38_RS01905 () | 379095..379481 | + | 387 | WP_000099690.1 | type-F conjugative transfer system protein TrbI | - |
| FGC38_RS01910 () | 379478..380110 | + | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| FGC38_RS01915 () | 380107..381099 | + | 993 | WP_000830185.1 | conjugal transfer pilus assembly protein TraU | - |
| FGC38_RS01920 () | 381108..381746 | + | 639 | WP_000777688.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| FGC38_RS01925 () | 381743..383551 | + | 1809 | WP_000821835.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| FGC38_RS01930 () | 383578..383835 | + | 258 | WP_000864318.1 | conjugal transfer protein TrbE | - |
| FGC38_RS01935 () | 383828..384571 | + | 744 | WP_001030367.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| FGC38_RS01940 () | 384587..384934 | + | 348 | WP_001287913.1 | conjugal transfer protein TrbA | - |
| FGC38_RS01945 () | 384936..385250 | - | 315 | WP_000415566.1 | protein ArtA | - |
| FGC38_RS01950 () | 385331..385615 | + | 285 | WP_000624109.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| FGC38_RS01955 () | 385602..386147 | + | 546 | WP_000059850.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| FGC38_RS01960 () | 386077..386418 | + | 342 | WP_001443031.1 | P-type conjugative transfer protein TrbJ | - |
| FGC38_RS01965 () | 386372..386785 | + | 414 | WP_001331260.1 | F-type conjugal transfer protein TrbF | - |
| FGC38_RS01970 () | 386785..388158 | + | 1374 | WP_021553026.1 | conjugal transfer protein TraH | - |
| FGC38_RS01975 () | 388155..390971 | + | 2817 | WP_001007055.1 | conjugal transfer mating pair stabilization protein TraG | - |
| FGC38_RS01980 () | 391004..391525 | + | 522 | WP_000632670.1 | conjugal transfer entry exclusion protein TraS | - |
| FGC38_RS01985 () | 391550..392281 | + | 732 | WP_000850422.1 | complement resistance protein TraT | - |
| FGC38_RS01990 () | 392534..394687 | + | 2154 | WP_000009350.1 | type IV conjugative transfer system coupling protein TraD | - |
| FGC38_RS01995 () | 394696..395094 | - | 399 | WP_000911324.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| FGC38_RS02000 () | 395094..395321 | - | 228 | WP_000450532.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| FGC38_RS02005 () | 395403..400673 | + | 5271 | WP_000987005.1 | conjugative transfer relaxase/helicase TraI | - |
| FGC38_RS02010 () | 400693..401439 | + | 747 | WP_000205776.1 | conjugal transfer pilus acetylase TraX | - |
| FGC38_RS02015 () | 401494..401886 | + | 393 | Protein_385 | fertility inhibition protein FinO | - |
| FGC38_RS02020 () | 401955..403117 | + | 1163 | WP_085947771.1 | IS3-like element IS3 family transposase | - |
| FGC38_RS02025 () | 403147..403800 | - | 654 | Protein_387 | helix-turn-helix domain-containing protein | - |
| FGC38_RS02030 () | 404103..404231 | + | 129 | Protein_388 | aldo/keto reductase | - |
| FGC38_RS02035 () | 404390..404983 | - | 594 | WP_001299021.1 | reactive chlorine species resistance protein RclC | - |
| FGC38_RS02040 () | 404995..405231 | - | 237 | WP_000474084.1 | DUF1471 domain-containing protein | - |
| FGC38_RS02045 () | 405340..406665 | - | 1326 | WP_001046307.1 | pyridine nucleotide-disulfide oxidoreductase | - |
| FGC38_RS02050 () | 406891..407745 | + | 855 | WP_000339594.1 | DNA-binding transcriptional regulator RclR | - |
| FGC38_RS02055 () | 408272..408991 | + | 720 | WP_001102108.1 | (Fe-S)-binding protein | - |
| FGC38_RS02060 () | 409002..410429 | + | 1428 | WP_000023927.1 | iron-sulfur cluster-binding protein | - |
| FGC38_RS02065 () | 410422..411117 | + | 696 | WP_000370307.1 | lactate utilization protein C | - |
| FGC38_RS02070 () | 411360..412028 | - | 669 | WP_001209100.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|