MGE detailed information
MGE type: Conjugative plasmid MGE length: 106597 bp
Accession: NZ_CP040598 Location: 1..106597 Organism: Klebsiella pneumoniae subsp. pneumoniae strain KpvST15_NDM Replicon: plasmid pKpvST15_NDM-1
Accession: NZ_CP040598 Location: 1..106597 Organism: Klebsiella pneumoniae subsp. pneumoniae strain KpvST15_NDM Replicon: plasmid pKpvST15_NDM-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FFY44_RS29745 () | 231..386 | - | 156 | WP_000074143.1 | hypothetical protein | - |
| FFY44_RS28505 () | 590..1612 | + | 1023 | WP_138663970.1 | IS5 family transposase ISKpn26 | Transposase |
| FFY44_RS28510 () | 1717..2094 | + | 378 | Protein_3 | restriction endonuclease | - |
| FFY44_RS28515 () | 2222..2779 | + | 558 | WP_042934582.1 | hypothetical protein | - |
| FFY44_RS28520 () | 3223..3804 | - | 582 | WP_045265539.1 | DUF2913 family protein | - |
| FFY44_RS28525 () | 3831..4421 | - | 591 | WP_064762226.1 | hypothetical protein | - |
| FFY44_RS28530 () | 4436..4729 | - | 294 | WP_032072918.1 | hypothetical protein | - |
| FFY44_RS28535 () | 4818..5102 | - | 285 | WP_032072917.1 | hypothetical protein | - |
| FFY44_RS28540 () | 5162..6010 | - | 849 | WP_032072916.1 | hypothetical protein | - |
| FFY44_RS29750 () | 6149..6295 | + | 147 | WP_032072915.1 | hypothetical protein | - |
| FFY44_RS28565 () | 7154..8017 | - | 864 | WP_016247520.1 | incFII family plasmid replication initiator RepA | - |
| FFY44_RS28570 () | 8010..8087 | - | 78 | WP_011201829.1 | RepA leader peptide Tap | - |
| FFY44_RS28575 () | 8306..8584 | - | 279 | WP_008324932.1 | replication regulatory protein RepA | - |
| FFY44_RS28580 () | 8736..9281 | - | 546 | WP_008324931.1 | Phospholipase D | VF |
| FFY44_RS28585 () | 9429..10220 | - | 792 | WP_016479977.1 | DsbA family protein | - |
| FFY44_RS28590 () | 10213..10932 | - | 720 | WP_008324922.1 | fertility inhibition protein FinO | - |
| FFY44_RS28595 () | 10999..11736 | - | 738 | WP_008324912.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| FFY44_RS28600 () | 11738..16978 | - | 5241 | WP_016479978.1 | Multifunctional conjugation protein TraI | Relaxase |
| FFY44_RS28605 () | 16978..19224 | - | 2247 | WP_016479979.1 | type IV conjugative transfer system coupling protein TraD | - |
| FFY44_RS28610 () | 19358..20033 | - | 676 | Protein_20 | Sel1-repeat-containing protein YbeT | VF |
| FFY44_RS28615 () | 20108..20539 | - | 432 | WP_008324118.1 | entry exclusion protein | - |
| FFY44_RS28620 () | 20561..23383 | - | 2823 | WP_008324119.1 | conjugal transfer mating pair stabilization protein TraG | - |
| FFY44_RS28625 () | 23383..24753 | - | 1371 | WP_016247527.1 | conjugal transfer protein TraH | - |
| FFY44_RS28630 () | 24740..25168 | - | 429 | WP_008324122.1 | hypothetical protein | - |
| FFY44_RS28635 () | 25161..25715 | - | 555 | WP_008324125.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| FFY44_RS28640 () | 25705..25953 | - | 249 | WP_016479982.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| FFY44_RS28645 () | 25970..26719 | - | 750 | WP_008324127.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| FFY44_RS28650 () | 26750..26938 | - | 189 | WP_008324128.1 | hypothetical protein | - |
| FFY44_RS28655 () | 26970..28823 | - | 1854 | WP_016479983.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| FFY44_RS28660 () | 28820..29449 | - | 630 | WP_008324130.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| FFY44_RS28665 () | 29466..30452 | - | 987 | WP_042934586.1 | conjugal transfer pilus assembly protein TraU | - |
| FFY44_RS28670 () | 30455..31102 | - | 648 | WP_008324132.1 | type-F conjugative transfer system protein TraW | - |
| FFY44_RS28675 () | 31102..31449 | - | 348 | WP_008324133.1 | type-F conjugative transfer system protein TrbI | - |
| FFY44_RS28680 () | 31446..34079 | - | 2634 | WP_138663971.1 | type IV secretion system protein TraC | - |
| FFY44_RS28685 () | 34072..34638 | - | 567 | WP_008324135.1 | conjugal transfer protein TraP | - |
| FFY44_RS28690 () | 34628..35029 | - | 402 | WP_016479985.1 | hypothetical protein | - |
| FFY44_RS28695 () | 35013..35198 | - | 186 | WP_008324139.1 | hypothetical protein | - |
| FFY44_RS28700 () | 35202..35426 | - | 225 | WP_008324141.1 | TraR/DksA C4-type zinc finger protein | - |
| FFY44_RS28705 () | 35546..36085 | - | 540 | WP_016247533.1 | type IV conjugative transfer system lipoprotein TraV | - |
| FFY44_RS28710 () | 36107..37501 | - | 1395 | WP_016479986.1 | conjugal transfer protein TraB | - |
| FFY44_RS28715 () | 37488..38230 | - | 743 | Protein_41 | type-F conjugative transfer system secretin TraK | - |
| FFY44_RS28720 () | 38217..38783 | - | 567 | WP_016247535.1 | type IV conjugative transfer system protein TraE | - |
| FFY44_RS28725 () | 38798..39103 | - | 306 | WP_008324160.1 | type IV conjugative transfer system protein TraL | - |
| FFY44_RS28730 () | 39254..39604 | - | 351 | WP_016247536.1 | type IV conjugative transfer system pilin TraA | - |
| FFY44_RS28735 () | 39662..39886 | - | 225 | WP_008324165.1 | TraY domain-containing protein | - |
| FFY44_RS28740 () | 39973..40662 | - | 690 | WP_008324166.1 | hypothetical protein | - |
| FFY44_RS28745 () | 40851..41243 | - | 393 | WP_008324167.1 | relaxosome protein TraM | - |
| FFY44_RS28750 () | 41675..42151 | + | 477 | WP_008324168.1 | hypothetical protein | VF |
| FFY44_RS28755 () | 42198..42728 | - | 531 | WP_008324170.1 | antirestriction protein | - |
| FFY44_RS28760 () | 43355..44185 | - | 831 | WP_008324171.1 | type I restriction-modification system subunit M | - |
| FFY44_RS28765 () | 44228..44491 | - | 264 | WP_008324174.1 | hypothetical protein | - |
| FFY44_RS28770 () | 44577..44921 | - | 345 | WP_008324177.1 | hypothetical protein | - |
| FFY44_RS28775 () | 44968..45255 | - | 288 | WP_008324178.1 | hypothetical protein | - |
| FFY44_RS28780 () | 45309..45683 | - | 375 | WP_008324180.1 | hypothetical protein | - |
| FFY44_RS28785 () | 46310..46669 | - | 360 | WP_015493069.1 | hypothetical protein | - |
| FFY44_RS28790 () | 46731..47054 | - | 324 | WP_008324183.1 | hypothetical protein | - |
| FFY44_RS28795 () | 47051..47779 | - | 729 | WP_008324185.1 | plasmid SOS inhibition protein A | - |
| FFY44_RS28800 () | 47776..48207 | - | 432 | WP_008324186.1 | conjugation system SOS inhibitor PsiB | - |
| FFY44_RS28805 () | 48250..50259 | - | 2010 | WP_016479992.1 | ParB/RepB/Spo0J family partition protein | - |
| FFY44_RS28810 () | 50330..50560 | - | 231 | WP_015493071.1 | DUF905 domain-containing protein | - |
| FFY44_RS28815 () | 51186..51503 | - | 318 | Protein_61 | hypothetical protein | - |
| FFY44_RS28820 () | 51538..51792 | - | 255 | WP_015493072.1 | DNA polymerase III subunit theta | - |
| FFY44_RS28825 () | 51985..52176 | - | 192 | WP_015493073.1 | hypothetical protein | - |
| FFY44_RS28830 () | 52219..52725 | - | 507 | WP_015493074.1 | antirestriction protein ArdA | - |
| FFY44_RS28835 () | 53130..53909 | - | 780 | WP_015493075.1 | hypothetical protein | - |
| FFY44_RS28840 () | 53963..54382 | - | 420 | WP_016479994.1 | DUF1380 domain-containing protein | - |
| FFY44_RS28845 () | 54393..54614 | - | 222 | WP_015493077.1 | hypothetical protein | - |
| FFY44_RS28850 () | 54614..55292 | - | 679 | Protein_68 | DNA methylase | - |
| FFY44_RS28855 () | 55651..56322 | + | 672 | WP_015493079.1 | SOS response-associated peptidase family protein | - |
| FFY44_RS28860 () | 56546..57765 | + | 1220 | Protein_70 | ISL3 family transposase ISKox3 | Transposase |
| FFY44_RS28865 () | 57825..58248 | + | 424 | Protein_71 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| FFY44_RS28870 () | 58248..59519 | + | 1272 | WP_015493081.1 | Y-family DNA polymerase | - |
| FFY44_RS28880 () | 59655..60626 | - | 972 | WP_016479949.1 | ParB/RepB/Spo0J family partition protein | - |
| FFY44_RS28885 () | 60623..61828 | - | 1206 | WP_015493083.1 | Plasmid partition protein A | VF |
| FFY44_RS28890 () | 62191..62823 | + | 633 | WP_016479950.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| FFY44_RS28895 () | 62884..63850 | + | 967 | Protein_76 | IS5 family transposase | - |
| FFY44_RS28900 () | 63889..64574 | + | 686 | Protein_77 | IS1 family transposase IS1G | Transposase |
| FFY44_RS28905 () | 64829..66832 | + | 2004 | WP_016479952.1 | hypothetical protein | VF |
| FFY44_RS28910 () | 66922..68166 | + | 1245 | WP_016479953.1 | hypothetical protein | VF |
| FFY44_RS28915 () | 68461..68664 | - | 204 | Protein_80 | MerR family transcriptional regulator | - |
| FFY44_RS28920 () | 68680..69377 | - | 698 | Protein_81 | IS1 family transposase IS1R | Transposase |
| FFY44_RS28925 () | 70184..70879 | + | 696 | WP_138663972.1 | IS6 family transposase IS15DII | Transposase |
| FFY44_RS28930 () | 70920..73502 | - | 2583 | WP_016479955.1 | putative signaling protein | VF |
| FFY44_RS28935 () | 73715..74410 | + | 696 | Protein_84 | IS1 family transposase | - |
| FFY44_RS28945 () | 75129..75479 | + | 351 | WP_000493378.1 | hypothetical protein | - |
| FFY44_RS28950 () | 75530..76273 | + | 744 | WP_000129823.1 | hypothetical protein | - |
| FFY44_RS28955 () | 76270..77046 | + | 777 | WP_099004434.1 | site-specific integrase | - |
| FFY44_RS28960 () | 77245..78567 | - | 1323 | WP_016479957.1 | GntP family transporter | - |
| FFY44_RS28965 () | 78729..79475 | - | 747 | Protein_89 | IS5 family transposase IS5B | Transposase |
| FFY44_RS28980 () | 80696..80848 | - | 153 | Protein_91 | IS5 family transposase IS5D | Transposase |
| FFY44_RS28985 () | 81330..82069 | + | 740 | Protein_92 | site-specific integrase | - |
| FFY44_RS28990 () | 82365..83354 | - | 990 | WP_022652311.1 | RepB family plasmid replication initiator protein | - |
| FFY44_RS28995 () | 84210..84479 | + | 270 | WP_022652312.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| FFY44_RS29000 () | 84483..85013 | + | 531 | WP_016479963.1 | GNAT family N-acetyltransferase | Toxin Detail |
| FFY44_RS29005 () | 85145..86161 | + | 1017 | WP_087728544.1 | IS5 family transposase IS5D | Transposase |
| FFY44_RS29010 () | 86308..87057 | - | 750 | Protein_97 | IS3 family transposase ISEhe3 | Transposase |
| FFY44_RS29015 () | 87067..87186 | - | 120 | Protein_98 | IS30 family transposase | - |
| FFY44_RS29020 () | 87447..87623 | - | 177 | Protein_99 | IS91 family transposase | - |
| FFY44_RS29025 () | 87812..89452 | - | 1641 | WP_004201176.1 | 60 kDa chaperonin | VF |
| FFY44_RS29030 () | 89508..89798 | - | 291 | WP_004201172.1 | co-chaperone GroES | - |
| FFY44_RS29035 () | 89992..90321 | + | 330 | WP_004201171.1 | divalent-cation tolerance protein CutA | - |
| FFY44_RS29040 () | 90326..91357 | + | 1032 | WP_004201169.1 | protein-disulfide reductase DsbD N-terminal domain-containing protein | - |
| FFY44_RS29045 () | 91368..92006 | - | 639 | WP_004201168.1 | phosphoribosylanthranilate isomerase | - |
| FFY44_RS29050 () | 92011..92376 | - | 366 | WP_004201167.1 | bleomycin binding protein Ble-MBL | - |
| FFY44_RS29055 () | 92380..93192 | - | 813 | WP_004201164.1 | Metallo-beta-lactamase type 2 | ARG |
| FFY44_RS29060 () | 93750..94598 | - | 849 | Protein_107 | RmtC family 16S rRNA (guanine(1405)-N(7))-methyltransferase | - |
| FFY44_RS29070 () | 94895..96424 | - | 1530 | WP_003149906.1 | IS91 family transposase ISVsa3 | Transposase |
| FFY44_RS29075 () | 97167..97928 | + | 762 | WP_032072922.1 | DDE-type integrase/transposase/recombinase | - |
| FFY44_RS29080 () | 97962..98648 | + | 687 | WP_016479967.1 | Mu transposase C-terminal domain-containing protein | - |
| FFY44_RS29085 () | 98645..99577 | + | 933 | WP_015460531.1 | TniB family NTP-binding protein | - |
| FFY44_RS29090 () | 99579..100544 | + | 966 | WP_015460530.1 | TniQ family protein | - |
| FFY44_RS29095 () | 100861..100929 | + | 69 | Protein_113 | QacE family quaternary ammonium compound efflux SMR transporter | - |
| FFY44_RS29100 () | 100923..101762 | + | 840 | WP_032072921.1 | Dihydropteroate synthase | ARG |
| FFY44_RS29110 () | 101890..102091 | + | 202 | Protein_115 | hypothetical protein | - |
| FFY44_RS29115 () | 102214..102513 | - | 300 | WP_001183923.1 | DUF2293 domain-containing protein | - |
| FFY44_RS29120 () | 102626..102796 | - | 171 | WP_016479969.1 | hypothetical protein | - |
| FFY44_RS29125 () | 103129..103681 | + | 553 | Protein_118 | DNA cytosine methyltransferase | - |
| FFY44_RS29130 () | 104058..104717 | + | 660 | WP_032072920.1 | endonuclease III | - |
| FFY44_RS29135 () | 104926..105801 | - | 876 | Protein_120 | IS5 family transposase ISKpn26 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|