MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 84498 bp
Accession: NZ_CP040574 Location: 1..84498 Organism: Salmonella enterica subsp. enterica serovar Typhi strain WGS1146 Replicon: plasmid unnamed
Accession: NZ_CP040574 Location: 1..84498 Organism: Salmonella enterica subsp. enterica serovar Typhi strain WGS1146 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FFM56_RS00005 () | 1..861 | + | 861 | WP_021546926.1 | replication protein RepA | - |
| FFM56_RS00010 () | 1261..2466 | + | 1206 | WP_000817632.1 | AAA family ATPase | - |
| FFM56_RS00015 () | 2463..3428 | + | 966 | WP_000725192.1 | ParB/RepB/Spo0J family partition protein | - |
| FFM56_RS24580 () | 3693..3948 | + | 256 | Protein_3 | hypothetical protein | - |
| FFM56_RS00025 () | 3929..4633 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| FFM56_RS00035 () | 4685..6451 | + | 1767 | Protein_5 | Tn3 family transposase | - |
| FFM56_RS00040 () | 6530..7534 | + | 1005 | WP_000427619.1 | IS110-like element IS5075 family transposase | - |
| FFM56_RS00045 () | 7716..7892 | - | 177 | WP_000954592.1 | Arm DNA-binding domain-containing protein | - |
| FFM56_RS00055 () | 8222..9037 | + | 816 | WP_001043265.1 | sulfonamide-resistant dihydropteroate synthase Sul2 | - |
| FFM56_RS00060 () | 9098..9901 | + | 804 | WP_001082319.1 | aminoglycoside O-phosphotransferase APH(3'')-Ib | - |
| FFM56_RS00065 () | 9901..10737 | + | 837 | WP_000480968.1 | aminoglycoside O-phosphotransferase APH(6)-Id | - |
| FFM56_RS00070 () | 10844..11248 | - | 405 | Protein_11 | IS91 family transposase | - |
| FFM56_RS00075 () | 11458..12318 | - | 861 | WP_000027057.1 | class A broad-spectrum beta-lactamase TEM-1 | - |
| FFM56_RS00080 () | 12501..13058 | - | 558 | WP_001235713.1 | recombinase family protein | - |
| FFM56_RS00085 () | 13222..13416 | + | 195 | Protein_14 | DUF4158 domain-containing protein | - |
| FFM56_RS00090 () | 13622..14884 | + | 1263 | WP_000608644.1 | IS1380-like element ISEc9 family transposase | - |
| FFM56_RS00095 () | 15140..16015 | + | 876 | WP_000239590.1 | class A extended-spectrum beta-lactamase CTX-M-15 | - |
| FFM56_RS00100 () | 16062..16394 | - | 333 | WP_001393253.1 | WbuC family cupin fold metalloprotein | - |
| FFM56_RS00105 () | 16408..19203 | + | 2796 | Protein_18 | Tn3-like element Tn3 family transposase | - |
| FFM56_RS00110 () | 19246..20261 | - | 1016 | Protein_19 | IS3 family transposase | - |
| FFM56_RS00115 () | 20656..21312 | + | 657 | WP_001516695.1 | quinolone resistance pentapeptide repeat protein QnrS1 | - |
| FFM56_RS00120 () | 21631..22059 | - | 429 | Protein_21 | recombinase family protein | - |
| FFM56_RS00125 () | 22092..23483 | - | 1392 | WP_001493761.1 | ISKra4-like element ISKpn19 family transposase | - |
| FFM56_RS00130 () | 23520..24092 | - | 573 | WP_001493762.1 | recombinase family protein | - |
| FFM56_RS00135 () | 24229..24819 | - | 591 | WP_012477564.1 | plasmid pRiA4b ORF-3 family protein | - |
| FFM56_RS00140 () | 24909..25070 | - | 162 | Protein_25 | type II toxin-antitoxin system mRNA interferase RelE | - |
| FFM56_RS00145 () | 25070..25309 | - | 240 | WP_000534857.1 | type II toxin-antitoxin system antitoxin RelB | - |
| FFM56_RS00150 () | 25690..27687 | + | 1998 | WP_005032116.1 | choline BCCT transporter BetT | - |
| FFM56_RS00160 () | 27751..29028 | + | 1278 | WP_000625667.1 | DUF2254 domain-containing protein | - |
| FFM56_RS00165 () | 29242..29931 | + | 690 | WP_001764183.1 | hypothetical protein | - |
| FFM56_RS00170 () | 30275..30979 | + | 705 | WP_001067852.1 | IS6-like element IS26 family transposase | - |
| FFM56_RS00180 () | 31034..32584 | + | 1551 | Protein_31 | Tn3-like element TnAs1 family transposase | - |
| FFM56_RS00185 () | 32885..33094 | - | 210 | Protein_32 | transposase | - |
| FFM56_RS00190 () | 33162..33380 | - | 219 | WP_021546941.1 | hypothetical protein | - |
| FFM56_RS00195 () | 33426..33707 | - | 282 | WP_000969996.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| FFM56_RS00200 () | 33704..33973 | - | 270 | WP_021546940.1 | hypothetical protein | Antitoxin Detail |
| FFM56_RS00210 () | 34720..35331 | + | 612 | Protein_36 | IS3 family transposase | - |
| FFM56_RS00215 () | 35363..35542 | - | 180 | WP_012600012.1 | hypothetical protein | - |
| FFM56_RS00220 () | 35766..36083 | + | 318 | WP_032156934.1 | hypothetical protein | - |
| FFM56_RS00225 () | 36152..37078 | + | 927 | WP_000617209.1 | WYL domain-containing protein | - |
| FFM56_RS00230 () | 37088..37687 | + | 600 | WP_001021938.1 | DUF1819 family protein | - |
| FFM56_RS00235 () | 37684..38268 | + | 585 | WP_000645940.1 | DUF1788 domain-containing protein | - |
| FFM56_RS00240 () | 38287..41964 | + | 3678 | WP_000687847.1 | BREX system P-loop protein BrxC | - |
| FFM56_RS00245 () | 41981..43744 | + | 1764 | WP_021546938.1 | DUF262 domain-containing protein | - |
| FFM56_RS00250 () | 43760..47389 | + | 3630 | WP_021546937.1 | BREX-1 system adenine-specific DNA-methyltransferase PglX | - |
| FFM56_RS00255 () | 47389..50046 | + | 2658 | WP_004011547.1 | BREX-1 system phosphatase PglZ type A | - |
| FFM56_RS00260 () | 50108..52153 | + | 2046 | WP_048659818.1 | protease Lon-related BREX system protein BrxL | - |
| FFM56_RS00265 () | 52261..52539 | - | 279 | Protein_47 | IS3 family transposase | - |
| FFM56_RS00270 () | 52829..53833 | - | 1005 | WP_021546935.1 | IS110-like element IS4321 family transposase | - |
| FFM56_RS00280 () | 54138..54835 | + | 698 | Protein_49 | IS1 family transposase | - |
| FFM56_RS00285 () | 54960..55394 | - | 435 | Protein_50 | GNAT family N-acetyltransferase | - |
| FFM56_RS00290 () | 55414..55659 | + | 246 | Protein_51 | transposase | - |
| FFM56_RS00295 () | 55729..56433 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| FFM56_RS00305 () | 56494..57312 | + | 819 | Protein_53 | transposase | - |
| FFM56_RS00315 () | 57658..58635 | - | 978 | WP_000600827.1 | tyrosine-type recombinase/integrase | - |
| FFM56_RS00320 () | 58967..59664 | - | 698 | Protein_55 | IS1 family transposase | - |
| FFM56_RS00325 () | 59721..60368 | - | 648 | Protein_56 | hypothetical protein | - |
| FFM56_RS00330 () | 60372..61286 | - | 915 | WP_000891983.1 | response regulator | - |
| FFM56_RS00335 () | 61600..61908 | + | 309 | WP_000062770.1 | hypothetical protein | - |
| FFM56_RS00340 () | 61901..62116 | + | 216 | WP_001112907.1 | hypothetical protein | - |
| FFM56_RS00345 () | 62119..62781 | + | 663 | WP_000958205.1 | lytic transglycosylase domain-containing protein | - |
| FFM56_RS00350 () | 62792..63091 | + | 300 | WP_000175462.1 | TrbC/VirB2 family protein | - |
| FFM56_RS00355 () | 63101..65851 | + | 2751 | WP_048659795.1 | VirB3 family type IV secretion system protein | - |
| FFM56_RS00360 () | 65870..66586 | + | 717 | WP_000770034.1 | type IV secretion system protein | - |
| FFM56_RS00365 () | 66598..66882 | + | 285 | WP_000769859.1 | EexN family lipoprotein | - |
| FFM56_RS00370 () | 66900..67907 | + | 1008 | WP_000014166.1 | type IV secretion system protein | - |
| FFM56_RS24585 () | 67984..68124 | + | 141 | WP_000873539.1 | hypothetical protein | - |
| FFM56_RS00375 () | 68117..68803 | + | 687 | WP_001293055.1 | type IV secretion system protein | - |
| FFM56_RS00380 () | 68796..69689 | + | 894 | WP_001045307.1 | P-type conjugative transfer protein VirB9 | - |
| FFM56_RS00385 () | 69686..70882 | + | 1197 | WP_000980841.1 | TrbI/VirB10 family protein | - |
| FFM56_RS00390 () | 70886..71935 | + | 1050 | WP_000342114.1 | P-type DNA transfer ATPase VirB11 | - |
| FFM56_RS00395 () | 71922..72323 | + | 402 | WP_000979494.1 | hypothetical protein | - |
| FFM56_RS00400 () | 72414..72731 | + | 318 | WP_000683352.1 | hypothetical protein | - |
| FFM56_RS00405 () | 72758..73093 | + | 336 | WP_000610141.1 | hypothetical protein | - |
| FFM56_RS00410 () | 73069..73377 | + | 309 | WP_000212005.1 | hypothetical protein | - |
| FFM56_RS00415 () | 73374..75575 | + | 2202 | WP_023281073.1 | type IA DNA topoisomerase | - |
| FFM56_RS00420 () | 75572..75964 | + | 393 | WP_001079960.1 | H-NS histone family protein | - |
| FFM56_RS00425 () | 76673..78580 | + | 1908 | WP_033546593.1 | TraM recognition domain-containing protein | - |
| FFM56_RS00430 () | 78595..79341 | + | 747 | WP_000909125.1 | hypothetical protein | - |
| FFM56_RS00435 () | 79334..79861 | + | 528 | WP_048659789.1 | phospholipase D family protein | - |
| FFM56_RS00440 () | 79893..80324 | - | 432 | WP_001776120.1 | hypothetical protein | - |
| FFM56_RS24590 () | 80456..80632 | - | 177 | WP_013438824.1 | hypothetical protein | - |
| FFM56_RS00445 () | 80804..81769 | - | 966 | WP_023281075.1 | DUF1738 domain-containing protein | - |
| FFM56_RS24595 () | 82221..82331 | + | 111 | Protein_83 | peptidase | - |
| FFM56_RS00455 () | 82448..82636 | + | 189 | WP_048230572.1 | hypothetical protein | - |
| FFM56_RS00460 () | 82646..83845 | + | 1200 | WP_000948429.1 | IS91 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|