MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 94033 bp
Accession: NZ_CP040569 Location: 1..94033 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain SAP17-8290 Replicon: plasmid pCFSAN059542
Accession: NZ_CP040569 Location: 1..94033 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain SAP17-8290 Replicon: plasmid pCFSAN059542
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FGA22_RS24590 () | 1020..1247 | + | 228 | WP_000450265.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| FGA22_RS24595 () | 1247..1645 | + | 399 | WP_000911322.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| FGA22_RS24600 () | 1654..3933 | - | 2280 | WP_110029902.1 | type IV conjugative transfer system coupling protein TraD | - |
| FGA22_RS24605 () | 4310..5041 | - | 732 | WP_022743186.1 | complement resistance protein TraT | - |
| FGA22_RS24610 () | 5077..5571 | - | 495 | WP_010999946.1 | entry exclusion protein | - |
| FGA22_RS24615 () | 5587..8409 | - | 2823 | WP_001007086.1 | conjugal transfer mating pair stabilization protein TraG | - |
| FGA22_RS24620 () | 8406..9788 | - | 1383 | WP_001161719.1 | conjugal transfer protein TraH | - |
| FGA22_RS24625 () | 9778..10326 | - | 549 | WP_022743183.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| FGA22_RS24630 () | 10313..10606 | - | 294 | WP_001233881.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| FGA22_RS24635 () | 10820..11569 | - | 750 | WP_001226854.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| FGA22_RS24640 () | 11581..11796 | - | 216 | WP_000700023.1 | conjugal transfer protein TrbE | - |
| FGA22_RS24645 () | 11807..13633 | - | 1827 | WP_000827528.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| FGA22_RS24650 () | 13630..14049 | - | 420 | WP_001229397.1 | HNH endonuclease | - |
| FGA22_RS24655 () | 14086..14724 | - | 639 | WP_000554823.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| FGA22_RS24660 () | 14709..15017 | - | 309 | WP_010999945.1 | hypothetical protein | - |
| FGA22_RS24665 () | 15036..16028 | - | 993 | WP_000833320.1 | conjugal transfer pilus assembly protein TraU | - |
| FGA22_RS24670 () | 16025..16657 | - | 633 | WP_000871995.1 | type-F conjugative transfer system protein TraW | - |
| FGA22_RS24675 () | 16654..17040 | - | 387 | WP_000105164.1 | type-F conjugative transfer system protein TrbI | - |
| FGA22_RS24680 () | 17015..19663 | - | 2649 | WP_000793310.1 | type IV secretion system protein TraC | - |
| FGA22_RS24685 () | 19679..19942 | - | 264 | WP_001239256.1 | hypothetical protein | - |
| FGA22_RS24690 () | 20059..20526 | - | 468 | WP_000549562.1 | hypothetical protein | - |
| FGA22_RS24695 () | 20519..20740 | - | 222 | WP_001278699.1 | conjugal transfer protein TraR | - |
| FGA22_RS24700 () | 20875..21390 | - | 516 | WP_001079995.1 | type IV conjugative transfer system lipoprotein TraV | - |
| FGA22_RS24705 () | 21387..21632 | - | 246 | WP_010999944.1 | DUF2689 domain-containing protein | - |
| FGA22_RS24710 () | 21610..22206 | - | 597 | WP_000527896.1 | conjugal transfer protein TraP | - |
| FGA22_RS24715 () | 22196..23617 | - | 1422 | WP_000146700.1 | conjugal transfer protein TraB | - |
| FGA22_RS24720 () | 23617..24357 | - | 741 | WP_001230719.1 | type-F conjugative transfer system secretin TraK | - |
| FGA22_RS24725 () | 24344..24910 | - | 567 | WP_000399768.1 | type IV conjugative transfer system protein TraE | - |
| FGA22_RS24730 () | 24932..25243 | - | 312 | WP_000012129.1 | type IV conjugative transfer system protein TraL | - |
| FGA22_RS24735 () | 25258..25620 | - | 363 | WP_001274201.1 | type IV conjugative transfer system pilin TraA | - |
| FGA22_RS24740 () | 25662..25889 | - | 228 | WP_001676655.1 | conjugal transfer relaxosome protein TraY | - |
| FGA22_RS24745 () | 25984..26670 | - | 687 | WP_000336297.1 | PAS domain-containing protein | - |
| FGA22_RS24750 () | 26863..27243 | - | 381 | WP_001151546.1 | relaxosome protein TraM | - |
| FGA22_RS24760 () | 27658..28128 | + | 471 | WP_001526856.1 | transglycosylase SLT domain-containing protein | - |
| FGA22_RS25300 () | 28439..29257 | - | 819 | Protein_35 | DUF945 domain-containing protein | - |
| FGA22_RS25305 () | 29360..29518 | - | 159 | WP_001704449.1 | hypothetical protein | - |
| FGA22_RS24775 () | 29767..30504 | - | 738 | WP_000581933.1 | plasmid SOS inhibition protein A | - |
| FGA22_RS24780 () | 30501..30935 | - | 435 | WP_010999943.1 | conjugation system SOS inhibitor PsiB | - |
| FGA22_RS24785 () | 30975..32972 | - | 1998 | WP_000117513.1 | ParB/RepB/Spo0J family partition protein | - |
| FGA22_RS24790 () | 33041..33283 | - | 243 | WP_000131520.1 | DUF905 domain-containing protein | - |
| FGA22_RS24795 () | 33338..33856 | - | 519 | WP_000741240.1 | single-stranded DNA-binding protein SSB2 | - |
| FGA22_RS24805 () | 34450..34677 | - | 228 | WP_134945369.1 | hypothetical protein | - |
| FGA22_RS24810 () | 34641..34964 | - | 324 | WP_000015983.1 | DNA polymerase III subunit theta | - |
| FGA22_RS24815 () | 35200..35634 | - | 435 | WP_000274533.1 | DUF1380 family protein | - |
| FGA22_RS24820 () | 35701..36135 | - | 435 | WP_001200150.1 | antirestriction protein | - |
| FGA22_RS24830 () | 36631..37395 | - | 765 | WP_001246548.1 | membrane protein | - |
| FGA22_RS24835 () | 37467..37880 | - | 414 | WP_000990114.1 | DUF1380 family protein | - |
| FGA22_RS24840 () | 37936..38157 | - | 222 | WP_001109588.1 | hypothetical protein | - |
| FGA22_RS24845 () | 38157..38837 | - | 681 | WP_000088645.1 | DNA methylase | - |
| FGA22_RS24855 () | 39219..39575 | - | 357 | WP_000369839.1 | hypothetical protein | - |
| FGA22_RS24860 () | 39568..40038 | - | 471 | WP_000490265.1 | hypothetical protein | - |
| FGA22_RS24865 () | 40549..40971 | + | 423 | WP_000925627.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| FGA22_RS24870 () | 40971..42245 | + | 1275 | WP_022743179.1 | Y-family DNA polymerase | - |
| FGA22_RS24875 () | 42327..43301 | - | 975 | WP_000064274.1 | ParB/RepB/Spo0J family partition protein | - |
| FGA22_RS24880 () | 43301..44506 | - | 1206 | WP_000427676.1 | AAA family ATPase | - |
| FGA22_RS24885 () | 44921..45862 | + | 942 | WP_000728917.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| FGA22_RS24890 () | 45894..46460 | - | 567 | WP_001541562.1 | DUF2913 family protein | - |
| FGA22_RS24895 () | 46517..46852 | - | 336 | WP_001527010.1 | hypothetical protein | - |
| FGA22_RS24900 () | 47036..47452 | - | 417 | WP_001541564.1 | hypothetical protein | - |
| FGA22_RS24905 () | 47538..48653 | - | 1116 | WP_001247118.1 | DNA-binding protein | - |
| FGA22_RS24910 () | 48912..49400 | + | 489 | WP_001135407.1 | hypothetical protein | - |
| FGA22_RS24920 () | 50055..50795 | + | 741 | WP_001541566.1 | carbonic anhydrase | - |
| FGA22_RS24925 () | 51002..51562 | + | 561 | WP_001240331.1 | recombinase family protein | - |
| FGA22_RS24930 () | 51546..53210 | + | 1665 | WP_000098783.1 | IS481 family transposase | - |
| FGA22_RS24935 () | 53143..54168 | + | 1026 | WP_001576625.1 | ExeA family protein | - |
| FGA22_RS24940 () | 54357..55394 | - | 1038 | WP_001121399.1 | IS630 family transposase | - |
| FGA22_RS25310 () | 55920..56032 | + | 113 | Protein_67 | transcriptional activator | - |
| FGA22_RS24950 () | 57070..57234 | + | 165 | WP_001576629.1 | glycoside hydrolase family protein | - |
| FGA22_RS24955 () | 57408..58175 | + | 768 | WP_001526990.1 | virulence protein SpvA | - |
| FGA22_RS25315 () | 58138..58305 | + | 168 | WP_001526987.1 | hypothetical protein | - |
| FGA22_RS24960 () | 58357..60132 | + | 1776 | WP_001676648.1 | SPI-2 type III secretion system effector NAD(+)--protein-arginine ADP-ribosyltransferase SpvB | - |
| FGA22_RS24965 () | 60413..61138 | + | 726 | WP_001122242.1 | type III secretion system effector phosphothreonine lyase SpvC | - |
| FGA22_RS24970 () | 61399..62049 | + | 651 | WP_001575489.1 | SPI-2 type III secretion system effector cysteine hydrolase SpvD | - |
| FGA22_RS24975 () | 62176..62600 | - | 425 | Protein_74 | IS200/IS605 family transposase | - |
| FGA22_RS24980 () | 62657..63007 | + | 351 | WP_001541541.1 | helix-turn-helix domain-containing protein | - |
| FGA22_RS24985 () | 63074..63634 | - | 561 | WP_000900095.1 | inverse autotransporter beta domain-containing protein | - |
| FGA22_RS25320 () | 63790..64077 | + | 288 | WP_071530243.1 | hypothetical protein | - |
| FGA22_RS24995 () | 64354..64839 | - | 486 | WP_000905606.1 | membrane protein | - |
| FGA22_RS25000 () | 64833..65342 | - | 510 | WP_001541544.1 | CaiF/GrlA family transcriptional regulator | - |
| FGA22_RS25010 () | 65346..66059 | - | 714 | Protein_80 | EAL domain-containing protein | - |
| FGA22_RS25015 () | 66068..66850 | - | 783 | WP_000082169.1 | site-specific integrase | - |
| FGA22_RS25020 () | 66885..67406 | - | 522 | WP_000198608.1 | hypothetical protein | - |
| FGA22_RS25025 () | 67403..67693 | - | 291 | WP_001266176.1 | hypothetical protein | - |
| FGA22_RS25030 () | 67695..68000 | - | 306 | WP_001159863.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| FGA22_RS25035 () | 68002..68220 | - | 219 | WP_000813641.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| FGA22_RS25040 () | 68896..69417 | + | 522 | WP_010999942.1 | hypothetical protein | - |
| FGA22_RS25050 () | 69901..70197 | + | 297 | WP_001687482.1 | hypothetical protein | - |
| FGA22_RS25055 () | 70691..71680 | + | 990 | WP_001527061.1 | RepB family plasmid replication initiator protein | - |
| FGA22_RS25060 () | 71939..72275 | - | 337 | Protein_89 | site-specific integrase | - |
| FGA22_RS25065 () | 72552..72933 | - | 382 | Protein_90 | YgiW/YdeI family stress tolerance OB fold protein | - |
| FGA22_RS25075 () | 73652..73954 | + | 303 | WP_000979451.1 | transcriptional regulator PefB | - |
| FGA22_RS25080 () | 74229..74747 | + | 519 | WP_000748205.1 | major pilin PefA | - |
| FGA22_RS25085 () | 74975..77383 | + | 2409 | WP_000007893.1 | outer membrane usher protein PefC | - |
| FGA22_RS25090 () | 77376..78068 | + | 693 | WP_001038510.1 | fimbrial chaperone PefD | - |
| FGA22_RS25095 () | 78083..78640 | + | 558 | WP_010999940.1 | membrane protein | - |
| FGA22_RS25100 () | 78893..79768 | + | 876 | WP_014343944.1 | hypothetical protein | - |
| FGA22_RS25105 () | 80200..80412 | + | 213 | WP_000004313.1 | transcriptional regulator PefI | - |
| FGA22_RS25110 () | 80397..80747 | + | 351 | WP_001526811.1 | helix-turn-helix transcriptional regulator | - |
| FGA22_RS25115 () | 80992..81645 | + | 654 | WP_000178592.1 | DsbA family protein | - |
| FGA22_RS25325 () | 81635..81781 | + | 147 | WP_001192557.1 | hypothetical protein | - |
| FGA22_RS25120 () | 81778..82677 | + | 900 | WP_010999938.1 | YjiK family protein | - |
| FGA22_RS25125 () | 82767..83324 | + | 558 | WP_000725062.1 | complement resistance protein Rck | - |
| FGA22_RS25130 () | 83591..84348 | + | 758 | Protein_103 | AraC family transcriptional regulator | - |
| FGA22_RS25135 () | 84445..84666 | - | 222 | WP_071533052.1 | SdiA-regulated domain-containing protein | - |
| FGA22_RS25145 () | 85526..86407 | - | 882 | WP_001738692.1 | incFII family plasmid replication initiator RepA | - |
| FGA22_RS25150 () | 86388..86465 | - | 78 | WP_001541552.1 | RepA leader peptide Tap | - |
| FGA22_RS25155 () | 86715..86981 | - | 267 | WP_010999936.1 | replication regulatory protein RepA | - |
| FGA22_RS25165 () | 87160..87602 | - | 443 | Protein_108 | phospholipase | - |
| FGA22_RS25170 () | 87768..87923 | - | 156 | WP_000983042.1 | hypothetical protein | - |
| FGA22_RS25175 () | 87936..88220 | - | 285 | WP_000477658.1 | hypothetical protein | - |
| FGA22_RS25180 () | 88335..88898 | - | 564 | WP_000139307.1 | fertility inhibition protein FinO | - |
| FGA22_RS25185 () | 88953..89693 | - | 741 | WP_000177629.1 | conjugal transfer pilus acetylase TraX | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|