MGE detailed information
MGE type: Genomic_island MGE length: 57686 bp
Accession: NZ_CP040349 Location: 1577222..1634907 Organism: Pseudomonas guguanensis strain HMFL31 Replicon: chromosome
Accession: NZ_CP040349 Location: 1577222..1634907 Organism: Pseudomonas guguanensis strain HMFL31 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FE254_RS07115 (FE254_07180) | 1572662..1573459 | + | 798 | WP_024889536.1 | hypothetical protein | - |
| FE254_RS07120 (FE254_07185) | 1573818..1574732 | + | 915 | WP_024889535.1 | DUF3577 domain-containing protein | - |
| FE254_RS07125 (FE254_07190) | 1574928..1575755 | + | 828 | WP_043689355.1 | DUF932 domain-containing protein | - |
| FE254_RS07130 (FE254_07195) | 1576137..1576784 | + | 648 | WP_024889533.1 | DUF3275 family protein | - |
| FE254_RS07135 (FE254_07200) | 1576878..1577201 | + | 324 | WP_081770065.1 | conserved plasmid protein | - |
| FE254_RS07140 (FE254_07205) | 1577222..1577482 | + | 261 | WP_024889532.1 | hypothetical protein | - |
| FE254_RS07145 (FE254_07210) | 1577559..1578215 | + | 657 | WP_024889531.1 | hypothetical protein | - |
| FE254_RS07150 (FE254_07215) | 1578285..1579394 | + | 1110 | WP_286586739.1 | DUF6094 domain-containing protein | - |
| FE254_RS07155 (FE254_07220) | 1579492..1579803 | + | 312 | WP_024889529.1 | hypothetical protein | - |
| FE254_RS07160 (FE254_07225) | 1579904..1582186 | + | 2283 | WP_024889528.1 | helicase-related protein | - |
| FE254_RS07165 (FE254_07230) | 1582274..1582690 | + | 417 | WP_024889527.1 | hypothetical protein | - |
| FE254_RS07170 (FE254_07235) | 1582749..1583042 | - | 294 | WP_081770064.1 | hypothetical protein | - |
| FE254_RS07175 (FE254_07240) | 1583226..1583816 | + | 591 | WP_024889526.1 | hypothetical protein | VF |
| FE254_RS07180 (FE254_07245) | 1583813..1584466 | + | 654 | WP_024889525.1 | hypothetical protein | - |
| FE254_RS07185 (FE254_07250) | 1584476..1585213 | + | 738 | WP_286586740.1 | TIGR03759 family integrating conjugative element protein | - |
| FE254_RS07190 (FE254_07255) | 1585195..1585770 | + | 576 | WP_024889523.1 | hypothetical protein | VF |
| FE254_RS07195 (FE254_07260) | 1585767..1586300 | + | 534 | WP_024889522.1 | integrating conjugative element protein | - |
| FE254_RS07200 (FE254_07265) | 1586311..1588482 | + | 2172 | WP_024889521.1 | type IV conjugative transfer system coupling protein TraD | - |
| FE254_RS07205 (FE254_07270) | 1588479..1589228 | + | 750 | WP_024889520.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| FE254_RS07210 (FE254_07275) | 1589340..1589717 | + | 378 | WP_024889519.1 | RAQPRD family integrative conjugative element protein | - |
| FE254_RS07215 (FE254_07280) | 1589714..1589947 | + | 234 | WP_024889518.1 | TIGR03758 family integrating conjugative element protein | - |
| FE254_RS07220 (FE254_07285) | 1589958..1590323 | + | 366 | WP_024889517.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| FE254_RS07225 (FE254_07290) | 1590334..1590732 | + | 399 | WP_024889516.1 | TIGR03750 family conjugal transfer protein | - |
| FE254_RS07230 (FE254_07295) | 1590729..1591409 | + | 681 | WP_024889515.1 | TIGR03746 family integrating conjugative element protein | - |
| FE254_RS07235 (FE254_07300) | 1591406..1592302 | + | 897 | WP_024889514.1 | TIGR03749 family integrating conjugative element protein | - |
| FE254_RS07240 (FE254_07305) | 1592292..1593722 | + | 1431 | WP_024889513.1 | TIGR03752 family integrating conjugative element protein | - |
| FE254_RS07245 (FE254_07310) | 1593703..1594134 | + | 432 | WP_024889512.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| FE254_RS07250 (FE254_07315) | 1594134..1597022 | + | 2889 | WP_286586749.1 | conjugative transfer ATPase | - |
| FE254_RS07255 (FE254_07320) | 1597087..1597995 | - | 909 | WP_024889510.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| FE254_RS07260 (FE254_07325) | 1597985..1598605 | - | 621 | WP_024889509.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | Antitoxin Detail |
| FE254_RS07265 (FE254_07330) | 1598767..1599537 | + | 771 | WP_024889508.1 | thioredoxin domain-containing protein | - |
| FE254_RS07270 (FE254_07335) | 1599728..1600228 | + | 501 | WP_024889507.1 | DNA repair protein RadC | - |
| FE254_RS07275 (FE254_07340) | 1600330..1600902 | + | 573 | WP_286586751.1 | hypothetical protein | - |
| FE254_RS07280 (FE254_07345) | 1601035..1601292 | + | 258 | WP_024889505.1 | metal-sensing transcriptional repressor | - |
| FE254_RS07285 (FE254_07350) | 1601302..1602639 | + | 1338 | WP_024889504.1 | MFS transporter | - |
| FE254_RS07290 (FE254_07355) | 1602817..1603233 | + | 417 | WP_236621755.1 | TIGR03757 family integrating conjugative element protein | - |
| FE254_RS07295 (FE254_07360) | 1603230..1604165 | + | 936 | WP_024889502.1 | TIGR03756 family integrating conjugative element protein | - |
| FE254_RS07300 (FE254_07365) | 1604174..1605574 | + | 1401 | WP_024889501.1 | integrating conjugative element protein | - |
| FE254_RS07305 (FE254_07370) | 1605634..1605903 | + | 270 | WP_286587188.1 | hypothetical protein | - |
| FE254_RS07310 (FE254_07375) | 1605926..1607440 | + | 1515 | WP_024889500.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| FE254_RS07315 (FE254_07380) | 1607455..1608981 | - | 1527 | WP_286586753.1 | hypothetical protein | - |
| FE254_RS07320 (FE254_07385) | 1609024..1609392 | - | 369 | WP_024889498.1 | DUF3742 family protein | - |
| FE254_RS07325 (FE254_07390) | 1609422..1609880 | - | 459 | WP_286586756.1 | type II toxin-antitoxin system YhaV family toxin | - |
| FE254_RS07330 (FE254_07395) | 1609880..1610200 | - | 321 | WP_286586758.1 | type II toxin-antitoxin system PrlF family antitoxin | - |
| FE254_RS07335 (FE254_07400) | 1610466..1612244 | + | 1779 | WP_286586759.1 | MobH family relaxase | - |
| FE254_RS07340 (FE254_07405) | 1613001..1614701 | + | 1701 | WP_286586761.1 | glycosyltransferase family 39 protein | - |
| FE254_RS07345 (FE254_07410) | 1614922..1615914 | + | 993 | WP_286586763.1 | GDP-mannose 4,6-dehydratase | VF |
| FE254_RS07350 (FE254_07415) | 1615911..1617083 | + | 1173 | WP_286586764.1 | UDP-N-acetyl-D-mannosamine dehydrogenase | VF |
| FE254_RS07355 (FE254_07420) | 1617196..1617927 | + | 732 | WP_286586765.1 | glycosyltransferase family 2 protein | - |
| FE254_RS07360 (FE254_07425) | 1617924..1618262 | + | 339 | WP_286586766.1 | lipid-A-disaccharide synthase N-terminal domain-containing protein | - |
| FE254_RS07365 (FE254_07430) | 1618394..1619998 | + | 1605 | WP_286586768.1 | hypothetical protein | VF |
| FE254_RS07370 (FE254_07435) | 1620687..1621946 | + | 1260 | WP_286586770.1 | TolC family protein | - |
| FE254_RS07375 (FE254_07440) | 1621943..1623205 | + | 1263 | WP_286586771.1 | hypothetical protein | VF |
| FE254_RS07380 (FE254_07445) | 1623216..1626467 | + | 3252 | WP_286586773.1 | CusA/CzcA family heavy metal efflux RND transporter | - |
| FE254_RS07385 (FE254_07450) | 1626464..1627042 | + | 579 | WP_286586775.1 | cation transporter | - |
| FE254_RS07390 (FE254_07455) | 1627161..1629638 | + | 2478 | WP_286586777.1 | heavy metal translocating P-type ATPase | - |
| FE254_RS07395 (FE254_07460) | 1629843..1630733 | + | 891 | WP_024889483.1 | LysR family transcriptional regulator | - |
| FE254_RS07400 (FE254_07465) | 1630753..1631046 | - | 294 | WP_081770063.1 | helix-turn-helix transcriptional regulator | - |
| FE254_RS07405 (FE254_07470) | 1631152..1631757 | + | 606 | WP_081770062.1 | LysR family substrate-binding domain-containing protein | - |
| FE254_RS07410 (FE254_07475) | 1631732..1633636 | - | 1905 | WP_024889481.1 | hypothetical protein ; Integrase | Integrase |
| FE254_RS07420 (FE254_07485) | 1634020..1634907 | - | 888 | WP_286586779.1 | 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase | VF |
| FE254_RS07425 (FE254_07490) | 1635299..1635991 | - | 693 | WP_286586781.1 | 16S rRNA pseudouridine(516) synthase | - |
| FE254_RS07430 (FE254_07495) | 1635995..1636201 | - | 207 | WP_286586782.1 | cysteine-rich CWC family protein | - |
| FE254_RS07435 (FE254_07500) | 1636201..1637670 | - | 1470 | WP_286586784.1 | sensor domain-containing diguanylate cyclase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|