MGE detailed information
MGE type: Genomic_island MGE length: 18721 bp
Accession: NZ_CP040311 Location: 682197..700917 Organism: Escherichia coli strain F3398 Replicon: chromosome
Accession: NZ_CP040311 Location: 682197..700917 Organism: Escherichia coli strain F3398 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FEL04_RS03090 () | 677336..678514 | - | 1179 | WP_001089435.1 | MFS transporter | - |
| FEL04_RS03095 () | 678582..679424 | - | 843 | WP_000746206.1 | YjiK family protein | - |
| FEL04_RS03100 () | 679690..681885 | - | 2196 | WP_153023015.1 | T3SS effector pentapeptide repeat protein EspX6 | - |
| FEL04_RS03105 () | 682197..682463 | - | 267 | WP_000657677.1 | DUF3343 domain-containing protein | - |
| FEL04_RS03110 () | 682460..683227 | - | 768 | WP_000222489.1 | hypothetical protein | - |
| FEL04_RS03115 () | 683237..684388 | - | 1152 | WP_001301805.1 | 2-hydroxyacyl-CoA dehydratase subunit D | - |
| FEL04_RS03120 () | 684504..685775 | - | 1272 | WP_001037406.1 | DUF445 domain-containing protein | - |
| FEL04_RS03125 () | 685816..687048 | - | 1233 | WP_001136983.1 | multidrug efflux MFS transporter MdtM | - |
| FEL04_RS03130 () | 687515..688267 | + | 753 | Protein_592 | Recombination-promoting nuclease RpnD | VF |
| FEL04_RS26800 () | 688272..688472 | + | 201 | WP_001310455.1 | hypothetical protein | - |
| FEL04_RS03135 () | 688715..690127 | - | 1413 | WP_000199295.1 | PLP-dependent aminotransferase family protein | - |
| FEL04_RS03140 () | 690304..690468 | + | 165 | WP_000394274.1 | DUF1127 domain-containing protein | - |
| FEL04_RS03145 () | 690565..691446 | + | 882 | WP_001304007.1 | DUF262 domain-containing protein | - |
| FEL04_RS03150 () | 691494..692657 | + | 1164 | WP_001304006.1 | DUF1524 domain-containing protein | - |
| FEL04_RS03155 () | 692704..693045 | - | 342 | WP_000132630.1 | endoribonuclease SymE | Toxin Detail |
| - () | 693040..693116 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 693040..693116 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 693040..693116 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 693040..693116 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 693040..693116 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 693040..693116 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 693040..693116 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 693040..693116 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| FEL04_RS03160 () | 693266..695020 | - | 1755 | WP_000110082.1 | restriction endonuclease subunit S | - |
| FEL04_RS03165 () | 695020..696489 | - | 1470 | WP_001302468.1 | type I restriction-modification system subunit M | - |
| FEL04_RS03170 () | 696556..698988 | - | 2433 | WP_000819018.1 | DEAD/DEAH box helicase family protein | - |
| FEL04_RS03175 () | 699266..699550 | + | 285 | WP_001304005.1 | DUF262 domain-containing protein | - |
| FEL04_RS03180 () | 699559..700917 | + | 1359 | WP_001304004.1 | DUF262 domain-containing protein | - |
| FEL04_RS03185 () | 700986..701942 | - | 957 | WP_001297640.1 | GTPase | - |
| FEL04_RS03190 () | 701953..702156 | - | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| FEL04_RS03195 () | 702206..704356 | - | 2151 | WP_001298933.1 | pyruvate/proton symporter BtsT | - |
| FEL04_RS03200 () | 704649..705191 | - | 543 | WP_000934391.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | NC_002655 | 5456776..5475497 | 0 | |||
| Escherichia coli O157:H7 str. Sakai | NC_002695 | 5426911..5445631 | 0 |