MGE detailed information
MGE type: Genomic_island MGE length: 10041 bp
Accession: NZ_CP040311 Location: 4670957..4680997 Organism: Escherichia coli strain F3398 Replicon: chromosome
Accession: NZ_CP040311 Location: 4670957..4680997 Organism: Escherichia coli strain F3398 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FEL04_RS22795 () | 4666155..4667363 | - | 1209 | WP_001301837.1 | propionate kinase | - |
| FEL04_RS22800 () | 4667389..4668720 | - | 1332 | WP_000107723.1 | threonine/serine transporter TdcC | - |
| FEL04_RS22805 () | 4668742..4669731 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| FEL04_RS22810 () | 4669830..4670768 | - | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| FEL04_RS22815 () | 4670957..4671301 | + | 345 | WP_000145832.1 | transcriptional activator TdcR | - |
| FEL04_RS22820 () | 4671557..4672096 | + | 540 | WP_000675739.1 | hypothetical protein | - |
| FEL04_RS22825 () | 4672118..4673305 | + | 1188 | WP_000484640.1 | YhaC family protein | - |
| FEL04_RS22835 () | 4673821..4674966 | - | 1146 | WP_001301934.1 | glycerate 2-kinase | - |
| FEL04_RS22840 () | 4675063..4675953 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| FEL04_RS22845 () | 4675983..4676753 | - | 771 | WP_001058231.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| FEL04_RS22850 () | 4676769..4678103 | - | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| FEL04_RS22855 () | 4678478..4680049 | + | 1572 | WP_001273776.1 | galactarate dehydratase | - |
| FEL04_RS22860 () | 4680198..4680533 | + | 336 | WP_001302819.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| FEL04_RS22865 () | 4680533..4680997 | + | 465 | WP_000347273.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| FEL04_RS22870 () | 4681052..4681861 | - | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| FEL04_RS22875 () | 4682110..4683390 | + | 1281 | WP_000681927.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| FEL04_RS22880 () | 4683413..4683886 | + | 474 | WP_001301475.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| FEL04_RS22885 () | 4683897..4684676 | + | 780 | WP_000406214.1 | PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC | - |
| FEL04_RS22890 () | 4684666..4685544 | + | 879 | WP_001295548.1 | PTS system mannose/fructose/sorbose family transporter subunit IID | - |
| FEL04_RS22895 () | 4685562..4685996 | + | 435 | WP_000948831.1 | PTS sugar transporter subunit IIA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. Sakai | Genomic island | TA20368 | NC_002695 | 4007011..4017164 | 0 |