MGE detailed information
MGE type: Conjugative plasmid MGE length: 91123 bp
Accession: NZ_CP040270 Location: 1..91123 Organism: Escherichia coli strain 1500 Replicon: plasmid pEc1500_CTX
Accession: NZ_CP040270 Location: 1..91123 Organism: Escherichia coli strain 1500 Replicon: plasmid pEc1500_CTX
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EST53_RS22890 () | 1..1032 | + | 1032 | WP_012783912.1 | replication protein | - |
| EST53_RS23645 () | 1729..1869 | + | 141 | WP_032072206.1 | hypothetical protein | - |
| EST53_RS22910 () | 2102..2611 | - | 510 | WP_012783913.1 | hypothetical protein | - |
| EST53_RS22915 () | 2667..3269 | - | 603 | WP_001703912.1 | hypothetical protein | - |
| EST53_RS22925 () | 3623..4969 | + | 1347 | WP_001703911.1 | hypothetical protein | - |
| EST53_RS22930 () | 5257..8052 | - | 2796 | Protein_5 | Tn3-like element Tn3 family transposase | - |
| EST53_RS22935 () | 8066..8398 | + | 333 | WP_001393253.1 | WbuC family cupin fold metalloprotein | - |
| EST53_RS22940 () | 8445..9320 | - | 876 | WP_000239590.1 | class A extended-spectrum beta-lactamase CTX-M-15 | - |
| EST53_RS22945 () | 9576..10838 | - | 1263 | WP_000608644.1 | IS1380-like element ISEc9 family transposase | - |
| EST53_RS22950 () | 11044..11238 | - | 195 | Protein_9 | DUF4158 domain-containing protein | - |
| EST53_RS22955 () | 11402..11959 | + | 558 | WP_001235713.1 | recombinase family protein | - |
| EST53_RS22960 () | 12142..13002 | + | 861 | WP_000027057.1 | class A broad-spectrum beta-lactamase TEM-1 | - |
| EST53_RS23650 () | 13407..13709 | - | 303 | WP_001245884.1 | hypothetical protein | - |
| EST53_RS22970 () | 13706..14332 | - | 627 | WP_000587689.1 | ParA family plasmid-partitioning AAA ATPase | - |
| EST53_RS22975 () | 14528..15799 | - | 1272 | WP_001703910.1 | Y-family DNA polymerase | - |
| EST53_RS22980 () | 15799..16236 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| EST53_RS22985 () | 16233..16481 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| EST53_RS22995 () | 16899..17801 | + | 903 | WP_001739825.1 | DUF1281 domain-containing protein | - |
| EST53_RS23000 () | 17896..18231 | - | 336 | WP_001340323.1 | hypothetical protein | - |
| EST53_RS23005 () | 18569..19549 | + | 981 | WP_012783921.1 | plasmid segregation protein ParM | - |
| EST53_RS23010 () | 19552..19974 | + | 423 | WP_000774832.1 | plasmid partitioning/stability family protein | - |
| EST53_RS23015 () | 19978..20289 | + | 312 | WP_033863049.1 | hypothetical protein | - |
| EST53_RS23020 () | 20365..21048 | + | 684 | WP_000086127.1 | DNA methylase | - |
| EST53_RS23025 () | 21049..21270 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| EST53_RS23030 () | 21284..21718 | + | 435 | WP_000274484.1 | DUF1380 family protein | - |
| EST53_RS23035 () | 21763..22533 | + | 771 | WP_012783922.1 | hypothetical protein | - |
| EST53_RS23045 () | 23069..23371 | + | 303 | WP_014653258.1 | antirestriction protein | - |
| EST53_RS23050 () | 23418..23840 | + | 423 | WP_000271703.1 | DUF1380 family protein | - |
| EST53_RS23055 () | 23837..24028 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| EST53_RS23075 () | 24799..25326 | + | 528 | WP_012783926.1 | single-stranded DNA-binding protein | - |
| EST53_RS23080 () | 25384..25617 | + | 234 | WP_015508350.1 | DUF905 domain-containing protein | - |
| EST53_RS23085 () | 25676..27634 | + | 1959 | WP_015508349.1 | ParB/RepB/Spo0J family partition protein | - |
| EST53_RS23090 () | 27687..28121 | + | 435 | WP_001579792.1 | conjugation system SOS inhibitor PsiB | - |
| EST53_RS23095 () | 28118..28837 | + | 720 | WP_012783927.1 | plasmid SOS inhibition protein A | - |
| EST53_RS23100 () | 28834..29430 | + | 597 | WP_000977995.1 | hypothetical protein | - |
| EST53_RS23110 () | 29892..30392 | + | 501 | WP_000117626.1 | antirestriction protein ArdA | - |
| EST53_RS23125 () | 31121..31555 | + | 435 | WP_000218858.1 | hypothetical protein | - |
| EST53_RS23130 () | 31649..31915 | + | 267 | WP_000804663.1 | hypothetical protein | - |
| EST53_RS23135 () | 32092..32481 | + | 390 | WP_000833767.1 | hypothetical protein | - |
| EST53_RS23140 () | 32478..33380 | + | 903 | WP_000038347.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| EST53_RS23145 () | 33442..33648 | + | 207 | WP_000150314.1 | hypothetical protein | - |
| EST53_RS23150 () | 33679..33930 | - | 252 | WP_000148285.1 | helix-turn-helix domain-containing protein | - |
| EST53_RS23160 () | 34509..35357 | + | 849 | WP_012783929.1 | DUF4942 domain-containing protein | - |
| EST53_RS23165 () | 35443..35778 | - | 336 | WP_000157082.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| EST53_RS23170 () | 36012..36344 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| EST53_RS23175 () | 36355..39054 | + | 2700 | WP_012783930.1 | IncI1-type relaxase NikB | - |
| EST53_RS23180 () | 39091..41382 | - | 2292 | WP_012783931.1 | hypothetical protein | - |
| EST53_RS23185 () | 41375..42445 | - | 1071 | WP_012783932.1 | IncI1-type conjugal transfer protein TrbB | - |
| EST53_RS23190 () | 42464..43672 | - | 1209 | WP_001703845.1 | IncI1-type conjugal transfer protein TrbA | - |
| - () | 43852..43909 | - | 58 | NuclAT_1 | - | - |
| - () | 43852..43909 | - | 58 | NuclAT_1 | - | - |
| - () | 43852..43909 | - | 58 | NuclAT_1 | - | - |
| - () | 43852..43909 | - | 58 | NuclAT_1 | - | - |
| EST53_RS23195 () | 43979..45070 | - | 1092 | WP_000426061.1 | hypothetical protein | - |
| - () | 45273..45333 | - | 61 | NuclAT_0 | - | Antitoxin Detail |
| - () | 45273..45333 | - | 61 | NuclAT_0 | - | Antitoxin Detail |
| - () | 45273..45333 | - | 61 | NuclAT_0 | - | Antitoxin Detail |
| - () | 45273..45333 | - | 61 | NuclAT_0 | - | Antitoxin Detail |
| EST53_RS23200 () | 45385..45537 | + | 153 | WP_001387489.1 | Hok/Gef family protein | Toxin Detail |
| EST53_RS23205 () | 45609..45860 | - | 252 | WP_001291964.1 | hypothetical protein | - |
| EST53_RS23210 () | 46160..46456 | + | 297 | WP_011264046.1 | hypothetical protein | - |
| EST53_RS23655 () | 46521..46697 | - | 177 | WP_001054900.1 | hypothetical protein | - |
| EST53_RS23215 () | 47089..47298 | + | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| EST53_RS23220 () | 47370..48032 | - | 663 | WP_012783935.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| EST53_RS23225 () | 48103..50271 | - | 2169 | WP_015508354.1 | DotA/TraY family protein | - |
| EST53_RS23230 () | 50368..50952 | - | 585 | WP_012783937.1 | conjugal transfer protein TraX | - |
| EST53_RS23235 () | 50981..52183 | - | 1203 | WP_012783938.1 | IncI1-type conjugal transfer protein TraW | - |
| EST53_RS23240 () | 52150..52764 | - | 615 | WP_000337394.1 | IncI1-type conjugal transfer protein TraV | - |
| EST53_RS23245 () | 52764..55808 | - | 3045 | WP_012783939.1 | IncI1-type conjugal transfer protein TraU | - |
| EST53_RS23250 () | 55898..56698 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| EST53_RS23255 () | 56682..56870 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| EST53_RS23260 () | 56934..57338 | - | 405 | WP_000086965.1 | IncI1-type conjugal transfer protein TraR | - |
| EST53_RS23265 () | 57389..57916 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| EST53_RS23270 () | 57916..58620 | - | 705 | WP_001493811.1 | IncI1-type conjugal transfer protein TraP | - |
| EST53_RS23275 () | 58620..59909 | - | 1290 | WP_011264042.1 | conjugal transfer protein TraO | - |
| EST53_RS23280 () | 59912..60895 | - | 984 | WP_001191880.1 | IncI1-type conjugal transfer protein TraN | - |
| EST53_RS23285 () | 60906..61598 | - | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| EST53_RS23290 () | 61595..61942 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| EST53_RS23295 () | 61960..65727 | - | 3768 | WP_012783940.1 | SogL protein | - |
| EST53_RS23300 () | 65817..66368 | - | 552 | WP_012783942.1 | phospholipase D family protein | - |
| EST53_RS23305 () | 66383..66673 | - | 291 | WP_001314267.1 | hypothetical protein | - |
| EST53_RS23310 () | 66670..67818 | - | 1149 | WP_001024971.1 | plasmid transfer ATPase TraJ | - |
| EST53_RS23315 () | 67815..68633 | - | 819 | WP_000646097.1 | IncI1-type conjugal transfer lipoprotein TraI | - |
| EST53_RS23320 () | 68630..69088 | - | 459 | WP_001079808.1 | IncI1-type conjugal transfer lipoprotein TraH | - |
| EST53_RS23325 () | 69482..70066 | - | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| EST53_RS23330 () | 70126..71328 | - | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| EST53_RS23335 () | 71414..72238 | - | 825 | WP_001238932.1 | conjugal transfer protein TraE | - |
| EST53_RS23340 () | 72389..73543 | - | 1155 | WP_001139955.1 | integrase | - |
| EST53_RS23365 () | 74563..74811 | + | 249 | WP_001349157.1 | hypothetical protein | - |
| EST53_RS23370 () | 74808..76100 | - | 1293 | WP_001417545.1 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| EST53_RS23375 () | 76100..76756 | - | 657 | WP_001193553.1 | prepilin peptidase | - |
| EST53_RS23380 () | 76741..77301 | - | 561 | WP_000014116.1 | lytic transglycosylase domain-containing protein | - |
| EST53_RS23385 () | 77311..77925 | - | 615 | WP_001542527.1 | hypothetical protein | - |
| EST53_RS23390 () | 77943..79040 | - | 1098 | WP_001492931.1 | type II secretion system F family protein | - |
| EST53_RS23395 () | 79053..80606 | - | 1554 | WP_001492932.1 | Flp pilus assembly complex ATPase component TadA | - |
| EST53_RS23400 () | 80617..81069 | - | 453 | WP_012783945.1 | type IV pilus biogenesis protein PilP | - |
| EST53_RS23405 () | 81056..82351 | - | 1296 | WP_012783946.1 | type 4b pilus protein PilO2 | - |
| EST53_RS23410 () | 82344..84026 | - | 1683 | WP_000748143.1 | PilN family type IVB pilus formation outer membrane protein | - |
| EST53_RS23415 () | 84040..84477 | - | 438 | WP_000539807.1 | type IV pilus biogenesis protein PilM | - |
| EST53_RS23420 () | 84477..85544 | - | 1068 | WP_012783947.1 | type IV pilus biogenesis lipoprotein PilL | - |
| EST53_RS23430 () | 86168..86464 | - | 297 | WP_000494780.1 | hypothetical protein | - |
| EST53_RS23435 () | 86631..86885 | - | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| EST53_RS23445 () | 87047..87598 | - | 552 | WP_000744644.1 | hypothetical protein | - |
| EST53_RS23450 () | 87771..88454 | - | 684 | WP_000213859.1 | conjugal transfer protein TraC | - |
| EST53_RS23460 () | 88708..89241 | - | 534 | WP_001303319.1 | transcription termination factor NusG | - |
| EST53_RS23470 () | 89683..89970 | - | 288 | WP_000074855.1 | conjugal transfer protein TraA | - |
| EST53_RS23475 () | 89888..90151 | - | 264 | WP_001749178.1 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|