MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 110998 bp
Accession: NZ_CP040186 Location: 1..110998 Organism: Raoultella planticola strain Rp_CZ180511 Replicon: plasmid pRp_3
Accession: NZ_CP040186 Location: 1..110998 Organism: Raoultella planticola strain Rp_CZ180511 Replicon: plasmid pRp_3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FDZ05_RS29630 () | 7..897 | + | 891 | WP_001378118.1 | copper resistance outer membrane transporter PcoB | - |
| FDZ05_RS29635 () | 937..1317 | + | 381 | WP_085397508.1 | copper resistance system metallochaperone PcoC | - |
| FDZ05_RS29640 () | 1322..2251 | + | 930 | WP_004118344.1 | copper resistance inner membrane protein PcoD | - |
| FDZ05_RS29645 () | 2306..2986 | + | 681 | WP_001188930.1 | Regulator of RpoS | VF |
| FDZ05_RS29650 () | 2983..4383 | + | 1401 | WP_064360950.1 | copper resistance membrane spanning protein PcoS | - |
| FDZ05_RS29655 () | 4599..5033 | + | 435 | WP_004118347.1 | hypothetical protein | - |
| FDZ05_RS29660 () | 5412..5510 | - | 99 | WP_004118688.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| FDZ05_RS29665 () | 5497..5676 | - | 180 | WP_004118349.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| FDZ05_RS29670 () | 5963..6544 | + | 582 | WP_073554098.1 | hypothetical protein | - |
| FDZ05_RS29675 () | 6700..7701 | + | 1002 | Protein_10 | Abi family protein | - |
| FDZ05_RS29680 () | 7840..8418 | - | 579 | WP_009654302.1 | hypothetical protein | - |
| FDZ05_RS29685 () | 8708..8971 | + | 264 | WP_009310051.1 | hypothetical protein | - |
| FDZ05_RS29690 () | 8968..9534 | + | 567 | WP_009654312.1 | hypothetical protein | - |
| FDZ05_RS29695 () | 9565..10054 | + | 490 | Protein_14 | DNA-binding protein | - |
| FDZ05_RS29700 () | 10098..10466 | + | 369 | WP_009653915.1 | hypothetical protein | - |
| FDZ05_RS29705 () | 10500..10703 | + | 204 | WP_004098931.1 | hemolysin expression modulator Hha | - |
| FDZ05_RS29710 () | 10752..11009 | + | 258 | WP_009653918.1 | hypothetical protein | - |
| FDZ05_RS29715 () | 11085..11339 | + | 255 | WP_009653916.1 | hypothetical protein | - |
| FDZ05_RS29720 () | 11499..12862 | - | 1364 | Protein_19 | IS3 family transposase | - |
| FDZ05_RS29725 () | 12961..14360 | + | 1400 | Protein_20 | ISNCY family transposase ISKpn21 | Transposase |
| FDZ05_RS29730 () | 14811..15434 | - | 624 | WP_180889153.1 | hypothetical protein | - |
| FDZ05_RS29735 () | 15554..15961 | - | 408 | WP_004364961.1 | Cd(II)/Pb(II)-responsive transcriptional regulator | - |
| FDZ05_RS29740 () | 16057..16953 | + | 897 | WP_180889154.1 | cation transporter | - |
| FDZ05_RS29745 () | 16957..17466 | + | 510 | WP_180889155.1 | Lipoprotein signal peptidase | VF |
| FDZ05_RS29750 () | 17488..18777 | + | 1290 | WP_004574636.1 | ISL3 family transposase ISPst9 | Transposase |
| FDZ05_RS29755 () | 18746..18838 | - | 93 | Protein_26 | peptidase M23 | - |
| FDZ05_RS29760 () | 20660..21310 | + | 651 | WP_123198856.1 | HAD-IB family hydrolase | - |
| FDZ05_RS29765 () | 21338..22579 | - | 1242 | WP_073554097.1 | VWA domain-containing protein | - |
| FDZ05_RS29770 () | 22667..23242 | - | 576 | WP_044348232.1 | TerD family protein | - |
| FDZ05_RS29775 () | 23322..23900 | - | 579 | WP_073554096.1 | tellurium resistance membrane protein TerD | - |
| FDZ05_RS29780 () | 23951..24991 | - | 1041 | WP_014839889.1 | tellurium resistance membrane protein TerC | - |
| FDZ05_RS29785 () | 25015..25470 | - | 456 | WP_073554095.1 | tellurite resistance TerB family protein | - |
| FDZ05_RS29790 () | 25493..26654 | - | 1162 | Protein_33 | TerD family protein | - |
| FDZ05_RS29795 () | 26651..27235 | - | 585 | WP_073554093.1 | tellurium resistance TerZ family protein | - |
| FDZ05_RS29800 () | 27546..28604 | + | 1059 | WP_180889156.1 | ATP-grasp domain-containing protein | - |
| FDZ05_RS29805 () | 28616..29758 | + | 1143 | WP_073554105.1 | phosphoribosyltransferase domain-containing protein | - |
| FDZ05_RS29810 () | 29751..30524 | + | 774 | WP_071359886.1 | hypothetical protein | - |
| FDZ05_RS29815 () | 30526..31605 | + | 1080 | WP_073554091.1 | cysteine protease StiP family protein | - |
| FDZ05_RS29820 () | 31605..32561 | + | 957 | WP_073554090.1 | HpcH/HpaI aldolase/citrate lyase family protein | - |
| FDZ05_RS29825 () | 32571..33794 | + | 1224 | WP_073554089.1 | DUF4236 domain-containing protein | - |
| FDZ05_RS29830 () | 33797..34270 | + | 474 | WP_073554088.1 | ribbon-helix-helix protein, CopG family | - |
| FDZ05_RS29835 () | 34591..35229 | + | 639 | WP_073554087.1 | VWA domain-containing protein | - |
| FDZ05_RS29840 () | 35254..35895 | + | 642 | WP_071359893.1 | TerD family protein | - |
| FDZ05_RS29845 () | 35896..36534 | + | 639 | WP_071359894.1 | VWA domain-containing protein | - |
| FDZ05_RS29850 () | 36629..37669 | + | 1041 | WP_073554086.1 | VWA domain-containing protein | - |
| FDZ05_RS29855 () | 37669..39435 | + | 1767 | WP_071359896.1 | protein phosphatase 2C domain-containing protein | - |
| FDZ05_RS29860 () | 39463..40962 | + | 1500 | WP_071359897.1 | kinase | - |
| FDZ05_RS29865 () | 41131..43335 | + | 2205 | WP_071359898.1 | hypothetical protein | - |
| FDZ05_RS29870 () | 43332..45026 | + | 1695 | WP_071359899.1 | 50S ribosome-binding GTPase | - |
| FDZ05_RS29875 () | 45093..45291 | + | 199 | Protein_50 | IS3 family transposase | - |
| FDZ05_RS29880 () | 45812..46882 | - | 1071 | WP_073554085.1 | PD-(D/E)XK nuclease family protein | - |
| FDZ05_RS29885 () | 47027..47194 | - | 168 | Protein_52 | IS30 family transposase | - |
| FDZ05_RS29890 () | 47154..47932 | - | 779 | Protein_53 | IS3 family transposase | - |
| FDZ05_RS29895 () | 47996..49148 | + | 1153 | Protein_54 | IS30 family transposase IS30H | Transposase |
| FDZ05_RS29900 () | 49161..49412 | - | 252 | Protein_55 | transposase | - |
| FDZ05_RS29905 () | 51460..52332 | - | 873 | WP_072046527.1 | incFII family plasmid replication initiator RepA | - |
| FDZ05_RS29910 () | 52325..52396 | - | 72 | WP_071887233.1 | RepA leader peptide Tap | - |
| FDZ05_RS29915 () | 52612..52881 | - | 270 | WP_040118434.1 | replication regulatory protein RepA | - |
| FDZ05_RS29920 () | 53022..53588 | - | 567 | WP_051800686.1 | Cardiolipin synthase B | VF |
| FDZ05_RS29925 () | 53595..53798 | - | 204 | Protein_60 | DUF2726 domain-containing protein | - |
| FDZ05_RS29930 () | 54097..55041 | - | 945 | Protein_61 | IS110 family transposase IS1618 | Transposase |
| FDZ05_RS29935 () | 55135..56634 | + | 1500 | WP_180889157.1 | IS21 family transposase ISEc10 | Transposase |
| FDZ05_RS29940 () | 56631..57386 | + | 756 | WP_038423655.1 | IS21 family transposase ISEc10 | Transposase |
| FDZ05_RS29945 () | 57453..58070 | - | 618 | Protein_64 | IS110 family transposase ISEc21 | Transposase |
| FDZ05_RS29950 () | 58352..59202 | - | 851 | Protein_65 | IS3 family transposase | - |
| FDZ05_RS29955 () | 59945..60427 | - | 483 | WP_032694614.1 | GNAT family N-acetyltransferase | Toxin Detail |
| FDZ05_RS29960 () | 60418..60696 | - | 279 | WP_004902250.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| FDZ05_RS29965 () | 60833..61027 | - | 195 | Protein_68 | hypothetical protein | - |
| FDZ05_RS29970 () | 61111..61452 | - | 342 | WP_032694615.1 | hypothetical protein | - |
| FDZ05_RS29975 () | 61771..62776 | - | 1006 | Protein_70 | IS110 family transposase IS4321R | Transposase |
| FDZ05_RS29980 () | 63084..63437 | + | 354 | WP_025376942.1 | As(III)-sensing metalloregulatory transcriptional repressor ArsR | - |
| FDZ05_RS29985 () | 63485..63847 | + | 363 | WP_032694616.1 | arsenite efflux transporter metallochaperone ArsD | - |
| FDZ05_RS29990 () | 63864..65615 | + | 1752 | WP_032694617.1 | arsenical pump-driving ATPase | - |
| FDZ05_RS29995 () | 65662..66951 | + | 1290 | WP_032694618.1 | arsenic transporter | - |
| FDZ05_RS30000 () | 66964..67389 | + | 426 | WP_032694619.1 | glutaredoxin-dependent arsenate reductase | - |
| FDZ05_RS30005 () | 67524..68221 | + | 698 | Protein_76 | IS1 family transposase | - |
| FDZ05_RS30010 () | 69261..70232 | - | 972 | WP_004206785.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| FDZ05_RS30015 () | 70232..71398 | - | 1167 | WP_000523812.1 | hypothetical protein | VF |
| FDZ05_RS30020 () | 72149..73159 | + | 1011 | WP_000200070.1 | RepB family plasmid replication initiator protein | - |
| FDZ05_RS30025 () | 73857..74597 | - | 741 | WP_001515717.1 | tyrosine-type recombinase/integrase | - |
| FDZ05_RS30030 () | 75246..75512 | - | 267 | WP_063923542.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| FDZ05_RS30035 () | 75743..77415 | - | 1673 | Protein_82 | DNA repair protein | - |
| FDZ05_RS30040 () | 77980..78789 | - | 810 | WP_047727565.1 | hypothetical protein | - |
| FDZ05_RS30045 () | 78807..79169 | - | 363 | WP_000533745.1 | hypothetical protein | - |
| FDZ05_RS30050 () | 79650..80924 | + | 1275 | WP_180889151.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| FDZ05_RS30055 () | 80942..81214 | + | 273 | WP_047727567.1 | helix-turn-helix transcriptional regulator | - |
| FDZ05_RS30060 () | 81211..81894 | + | 684 | WP_047727568.1 | hypothetical protein | - |
| FDZ05_RS30065 () | 81939..82157 | + | 219 | WP_011091034.1 | hypothetical protein | - |
| FDZ05_RS30070 () | 82160..82369 | + | 210 | WP_004187413.1 | hypothetical protein | - |
| FDZ05_RS30075 () | 82437..82670 | + | 234 | WP_047727569.1 | hypothetical protein | - |
| FDZ05_RS30080 () | 82816..83124 | - | 309 | Protein_91 | IS5 family transposase ISThi1 | Transposase |
| FDZ05_RS30085 () | 83232..84101 | - | 870 | WP_010466239.1 | HTH-type transcriptional regulator ArgP | VF |
| FDZ05_RS30090 () | 84095..85105 | - | 1011 | WP_003118429.1 | phosphonate dehydrogenase PtxD | - |
| FDZ05_RS30095 () | 85114..85941 | - | 828 | WP_010466252.1 | phosphonate ABC transporter, permease protein PhnE | - |
| FDZ05_RS30100 () | 85950..86813 | - | 864 | WP_047727570.1 | phosphate/phosphite/phosphonate ABC transporter substrate-binding protein | - |
| FDZ05_RS30105 () | 86810..87637 | - | 828 | WP_047727571.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| FDZ05_RS30110 () | 87980..88499 | + | 520 | Protein_97 | IS5 family transposase ISPst7 | Transposase |
| FDZ05_RS30115 () | 89437..90417 | - | 981 | WP_000019450.1 | IS5 family transposase ISKpn26 | Transposase |
| FDZ05_RS30125 () | 91666..92774 | + | 1109 | WP_098140149.1 | IS3 family transposase ISRso16 | Transposase |
| FDZ05_RS30135 () | 94269..94610 | - | 342 | WP_047727581.1 | DUF305 domain-containing protein | - |
| FDZ05_RS30140 () | 94754..95185 | - | 432 | WP_000790483.1 | silver-binding protein SilE | - |
| FDZ05_RS30145 () | 95436..96911 | - | 1476 | WP_004118652.1 | copper/silver sensor histidine kinase SilS | - |
| FDZ05_RS30150 () | 96904..97584 | - | 681 | WP_000697968.1 | Regulator of RpoS | VF |
| FDZ05_RS30155 () | 97774..99159 | + | 1386 | WP_000475503.1 | hypothetical protein | VF |
| FDZ05_RS30160 () | 99188..99541 | + | 354 | WP_001246153.1 | cation efflux system protein CusF | - |
| FDZ05_RS30165 () | 99655..100947 | + | 1293 | WP_001485328.1 | Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB | - |
| FDZ05_RS30170 () | 100958..104104 | + | 3147 | WP_000574021.1 | Cu(+)/Ag(+) efflux RND transporter permease subunit SilA | - |
| FDZ05_RS30175 () | 104191..104631 | + | 441 | WP_002436620.1 | hypothetical protein | - |
| FDZ05_RS30180 () | 104729..107200 | + | 2472 | WP_129897305.1 | Ag(+)-translocating P-type ATPase SilP | - |
| FDZ05_RS30185 () | 107241..107438 | + | 198 | WP_000843497.1 | DUF2933 domain-containing protein | - |
| FDZ05_RS30190 () | 107472..108209 | - | 738 | WP_000287501.1 | hypothetical protein | VF |
| FDZ05_RS30195 () | 108498..108947 | - | 450 | WP_064360952.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|