MGE detailed information
MGE type: Prophage MGE length: 53225 bp
Accession: NZ_CP040183 Location: 3499669..3552893 Organism: Raoultella planticola strain Rp_CZ180511 Replicon: chromosome
Accession: NZ_CP040183 Location: 3499669..3552893 Organism: Raoultella planticola strain Rp_CZ180511 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FDZ05_RS16595 () | 3495350..3495631 | + | 282 | WP_180888577.1 | hypothetical protein | - |
| FDZ05_RS16600 () | 3496008..3497234 | + | 1227 | WP_142630354.1 | MFS transporter | - |
| FDZ05_RS16605 () | 3497471..3498214 | - | 744 | WP_142630356.1 | MBL fold metallo-hydrolase | - |
| FDZ05_RS16610 () | 3498433..3498585 | + | 153 | WP_180888578.1 | hypothetical protein | - |
| FDZ05_RS16615 () | 3498740..3498949 | + | 210 | WP_047664677.1 | hypothetical protein | - |
| FDZ05_RS16625 () | 3499380..3499682 | - | 303 | WP_142630358.1 | hypothetical protein | - |
| FDZ05_RS16630 () | 3499771..3500175 | + | 405 | Protein_3269 | PhoH family protein | - |
| FDZ05_RS16635 () | 3500295..3500549 | + | 255 | WP_072025005.1 | GrxA family glutaredoxin | - |
| FDZ05_RS16640 () | 3500727..3501086 | - | 360 | WP_052135791.1 | hypothetical protein | - |
| FDZ05_RS16645 () | 3501447..3502001 | + | 555 | WP_052135790.1 | hypothetical protein | - |
| FDZ05_RS16650 () | 3502205..3502624 | - | 420 | WP_047664674.1 | hypothetical protein | - |
| FDZ05_RS16655 () | 3502596..3503060 | - | 465 | WP_047664672.1 | hypothetical protein | - |
| FDZ05_RS16660 () | 3503398..3503550 | - | 153 | WP_074188128.1 | isocitrate dehydrogenase | - |
| FDZ05_RS16665 () | 3503915..3504301 | - | 387 | WP_115192091.1 | LexA family transcriptional regulator | - |
| FDZ05_RS16670 () | 3504382..3504630 | + | 249 | WP_132467583.1 | DinI family protein | - |
| FDZ05_RS16675 () | 3504743..3515653 | - | 10911 | WP_180888579.1 | carbohydrate binding domain-containing protein | - |
| FDZ05_RS16680 () | 3515715..3516314 | - | 600 | WP_131066631.1 | tail assembly protein | - |
| FDZ05_RS16685 () | 3516377..3516793 | - | 417 | WP_117132464.1 | hypothetical protein | - |
| FDZ05_RS16690 () | 3516827..3517537 | - | 711 | WP_180888580.1 | C40 family peptidase | - |
| FDZ05_RS16695 () | 3517539..3518291 | - | 753 | WP_180888581.1 | phage minor tail protein L | - |
| FDZ05_RS16700 () | 3518288..3518635 | - | 348 | WP_180888582.1 | phage tail protein | - |
| FDZ05_RS16705 () | 3518783..3521782 | - | 3000 | Protein_3284 | phage tail tape measure protein | - |
| FDZ05_RS16710 () | 3521766..3522080 | - | 315 | WP_071824267.1 | phage tail assembly protein T | - |
| FDZ05_RS16715 () | 3522101..3522529 | - | 429 | WP_132467591.1 | phage minor tail protein G | - |
| FDZ05_RS16720 () | 3522540..3523283 | - | 744 | WP_132467592.1 | phage tail protein | - |
| FDZ05_RS16725 () | 3523290..3523688 | - | 399 | WP_086531233.1 | phage minor tail U family protein | - |
| FDZ05_RS16730 () | 3523685..3524269 | - | 585 | WP_132467593.1 | phage tail protein | - |
| FDZ05_RS16735 () | 3524278..3524631 | - | 354 | WP_047720851.1 | tail attachment protein | - |
| FDZ05_RS16740 () | 3524642..3525061 | - | 420 | WP_180889130.1 | DNA-packaging protein FI | - |
| FDZ05_RS16745 () | 3525112..3526137 | - | 1026 | WP_047052034.1 | major capsid protein | - |
| FDZ05_RS16750 () | 3526205..3526537 | - | 333 | WP_047720848.1 | head decoration protein | - |
| FDZ05_RS16755 () | 3526547..3527878 | - | 1332 | WP_132467594.1 | S49 family peptidase | - |
| FDZ05_RS16760 () | 3527859..3529451 | - | 1593 | WP_132467595.1 | phage portal protein | - |
| FDZ05_RS16765 () | 3529448..3529654 | - | 207 | WP_132467596.1 | gpW family protein | - |
| FDZ05_RS16770 () | 3529654..3531576 | - | 1923 | WP_132467597.1 | phage terminase large subunit family protein | - |
| FDZ05_RS16775 () | 3531551..3532096 | - | 546 | WP_152308856.1 | terminase small subunit | - |
| FDZ05_RS16780 () | 3532390..3532818 | - | 429 | WP_132467599.1 | hypothetical protein | - |
| FDZ05_RS16785 () | 3532821..3533111 | - | 291 | WP_132467600.1 | hypothetical protein | - |
| FDZ05_RS16790 () | 3533287..3533763 | + | 477 | WP_165926674.1 | retroviral-like aspartic protease family protein | - |
| FDZ05_RS16795 () | 3533766..3534119 | - | 354 | WP_132467602.1 | hypothetical protein | - |
| FDZ05_RS16800 () | 3534162..3534638 | - | 477 | WP_180889131.1 | DUF2514 domain-containing protein | - |
| FDZ05_RS16805 () | 3534671..3535201 | - | 531 | WP_180888583.1 | lysozyme | - |
| FDZ05_RS16810 () | 3535179..3535415 | - | 237 | WP_004111739.1 | class II holin family protein | - |
| FDZ05_RS16815 () | 3535571..3535978 | - | 408 | WP_012542176.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| FDZ05_RS16820 () | 3536026..3536202 | - | 177 | WP_180888584.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| FDZ05_RS16825 () | 3536565..3537722 | + | 1158 | WP_020803203.1 | DUF262 domain-containing protein | - |
| FDZ05_RS16830 () | 3537724..3538413 | + | 690 | WP_012542179.1 | hypothetical protein | - |
| FDZ05_RS16835 () | 3538379..3539422 | - | 1044 | WP_012542180.1 | DNA cytosine methyltransferase | - |
| FDZ05_RS16840 () | 3539512..3539856 | - | 345 | WP_180888585.1 | antitermination protein | - |
| FDZ05_RS16845 () | 3539869..3540912 | - | 1044 | WP_180888586.1 | DUF968 domain-containing protein | - |
| FDZ05_RS16850 () | 3540912..3541115 | - | 204 | WP_180888587.1 | hypothetical protein | - |
| FDZ05_RS16855 () | 3541112..3541504 | - | 393 | WP_180888588.1 | DNA-binding protein | - |
| FDZ05_RS16860 () | 3541545..3541784 | - | 240 | WP_180889132.1 | hypothetical protein | - |
| FDZ05_RS16865 () | 3541847..3542080 | - | 234 | WP_104897251.1 | DinI-like family protein | - |
| FDZ05_RS16870 () | 3542219..3542476 | - | 258 | WP_180888589.1 | DNA polymerase III subunit theta | - |
| FDZ05_RS16875 () | 3542812..3543827 | + | 1016 | Protein_3318 | IS5 family transposase IS5D | Transposase |
| FDZ05_RS16880 () | 3543961..3544344 | + | 384 | WP_180889133.1 | hypothetical protein | - |
| FDZ05_RS16885 () | 3544531..3544719 | - | 189 | WP_180888590.1 | hypothetical protein | - |
| FDZ05_RS16890 () | 3544709..3544981 | - | 273 | WP_180888591.1 | DUF977 family protein | - |
| FDZ05_RS16895 () | 3544984..3545424 | - | 441 | WP_180888592.1 | hypothetical protein | - |
| FDZ05_RS16900 () | 3545438..3546109 | - | 672 | WP_180888593.1 | replication protein | - |
| FDZ05_RS16905 () | 3546132..3546338 | - | 207 | Protein_3324 | hypothetical protein | - |
| FDZ05_RS16910 () | 3546837..3547103 | - | 267 | Protein_3325 | DUF1376 domain-containing protein | - |
| FDZ05_RS16915 () | 3547158..3547712 | - | 555 | WP_180888594.1 | hypothetical protein | - |
| FDZ05_RS16920 () | 3547715..3547930 | - | 216 | WP_180888595.1 | helix-turn-helix domain-containing protein | - |
| FDZ05_RS16925 () | 3548034..3548420 | + | 387 | WP_180888596.1 | helix-turn-helix domain-containing protein | - |
| FDZ05_RS16930 () | 3549107..3549301 | + | 195 | WP_180888597.1 | DUF1482 family protein | - |
| FDZ05_RS16935 () | 3549475..3551487 | + | 2013 | WP_180888598.1 | exonuclease | - |
| FDZ05_RS16940 () | 3551540..3551785 | + | 246 | WP_180888599.1 | excisionase | - |
| FDZ05_RS16945 () | 3551766..3552893 | + | 1128 | WP_180888600.1 | Membrane-bound lytic murein transglycosylase C ; Integrase | Integrase |
| FDZ05_RS16950 () | 3553013..3554263 | - | 1251 | WP_032695751.1 | NADP-dependent isocitrate dehydrogenase | - |
| FDZ05_RS16955 () | 3554497..3555147 | + | 651 | WP_142630360.1 | 23S rRNA pseudouridine(2457) synthase RluE | - |
| FDZ05_RS16960 () | 3555168..3555626 | + | 459 | WP_032688312.1 | NUDIX hydrolase | - |
| FDZ05_RS16965 () | 3555683..3556789 | + | 1107 | WP_046852754.1 | tRNA 2-thiouridine(34) synthase MnmA | - |
| FDZ05_RS16970 () | 3556849..3557490 | + | 642 | WP_004860640.1 | high frequency lysogenization protein HflD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|