MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 58980 bp
Accession: NZ_CP040168 Location: 1..58980 Organism: Piscirickettsia salmonis strain Psal-104b Replicon: plasmid unnamed2
Accession: NZ_CP040168 Location: 1..58980 Organism: Piscirickettsia salmonis strain Psal-104b Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Psal104b_RS17260 (Psal104b_03420) | 1..861 | + | 861 | WP_047927060.1 | ParA family protein | - |
| Psal104b_RS17265 (Psal104b_03421) | 858..1706 | + | 849 | WP_036774869.1 | ParB/RepB/Spo0J family partition protein | - |
| Psal104b_RS17270 (Psal104b_03422) | 2162..3445 | + | 1284 | WP_230382704.1 | glutamate-1-semialdehyde 2,1-aminomutase | - |
| Psal104b_RS17275 (Psal104b_03423) | 3740..4480 | + | 741 | WP_036775038.1 | ester cyclase | - |
| Psal104b_RS17280 (Psal104b_03424) | 4466..5137 | - | 672 | WP_036775037.1 | HAD family hydrolase | - |
| Psal104b_RS17285 (Psal104b_03425) | 5143..5928 | - | 786 | WP_053063426.1 | class I SAM-dependent methyltransferase | - |
| Psal104b_RS17290 (Psal104b_03426) | 6048..6404 | - | 357 | WP_047927058.1 | hypothetical protein | - |
| Psal104b_RS17295 (Psal104b_03427) | 6483..6761 | + | 279 | WP_036774994.1 | hypothetical protein | - |
| Psal104b_RS17300 (Psal104b_03428) | 6967..7221 | + | 255 | WP_144420828.1 | hypothetical protein | - |
| Psal104b_RS17305 (Psal104b_03429) | 7419..7736 | + | 318 | WP_052106244.1 | type IV conjugative transfer system pilin TraA | - |
| Psal104b_RS17310 (Psal104b_03430) | 7752..8042 | + | 291 | WP_036775000.1 | type IV conjugative transfer system protein TraL | - |
| Psal104b_RS17315 (Psal104b_03431) | 8223..9626 | + | 1404 | WP_048876012.1 | IS4 family transposase ISArch10 | Transposase |
| Psal104b_RS17320 (Psal104b_03432) | 9659..10168 | + | 510 | WP_062365791.1 | TraE/TraK family type IV conjugative transfer system protein | - |
| Psal104b_RS17325 (Psal104b_03433) | 10161..10865 | + | 705 | WP_051929536.1 | type-F conjugative transfer system secretin TraK | - |
| Psal104b_RS17330 (Psal104b_03434) | 10875..12344 | + | 1470 | WP_051929537.1 | TrbI/VirB10 family protein | - |
| Psal104b_RS17335 (Psal104b_03435) | 12347..12793 | + | 447 | WP_065653727.1 | type IV conjugative transfer system lipoprotein TraV | - |
| Psal104b_RS17340 (Psal104b_03436) | 12842..15385 | + | 2544 | WP_230382706.1 | type IV secretion system protein TraC | - |
| Psal104b_RS17345 (Psal104b_03437) | 15372..15719 | + | 348 | WP_036774457.1 | TrbI F-type domain-containing protein | - |
| Psal104b_RS17350 (Psal104b_03438) | 15712..16329 | + | 618 | WP_036773375.1 | type-F conjugative transfer system protein TraW | - |
| Psal104b_RS17355 (Psal104b_03439) | 16434..17423 | + | 990 | WP_036773373.1 | conjugal transfer pilus assembly protein TraU | - |
| Psal104b_RS17360 (Psal104b_03440) | 17432..18097 | + | 666 | WP_036773372.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| Psal104b_RS17365 (Psal104b_03441) | 18103..20001 | + | 1899 | WP_036773369.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| Psal104b_RS17370 (Psal104b_03442) | 19998..20810 | + | 813 | WP_036773367.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| Psal104b_RS17375 (Psal104b_03443) | 20807..21298 | + | 492 | WP_027242554.1 | conjugal transfer protein TraF | - |
| Psal104b_RS17380 (Psal104b_03444) | 21291..22673 | + | 1383 | WP_027242553.1 | conjugal transfer protein TraH | - |
| Psal104b_RS17385 (Psal104b_03445) | 22675..25464 | + | 2790 | WP_027242552.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| Psal104b_RS17390 (Psal104b_03446) | 25481..25798 | - | 318 | WP_027242551.1 | hypothetical protein | - |
| Psal104b_RS17395 (Psal104b_03447) | 25881..26624 | + | 744 | WP_027242550.1 | complement resistance protein TraT | - |
| Psal104b_RS17400 (Psal104b_03448) | 26663..26983 | + | 321 | WP_027242549.1 | hypothetical protein | - |
| Psal104b_RS17405 (Psal104b_03449) | 26994..28991 | + | 1998 | WP_052106227.1 | type IV conjugative transfer system coupling protein TraD | - |
| Psal104b_RS17410 (Psal104b_03450) | 28991..29743 | + | 753 | WP_027242548.1 | DsbA family protein | - |
| Psal104b_RS17415 (Psal104b_03451) | 29755..29961 | + | 207 | WP_027242547.1 | hypothetical protein | - |
| Psal104b_RS17420 (Psal104b_03452) | 30030..35900 | + | 5871 | WP_075275450.1 | Multifunctional conjugation protein TraI | Relaxase |
| Psal104b_RS17425 (Psal104b_03453) | 35895..36224 | - | 330 | WP_036774904.1 | hypothetical protein | - |
| Psal104b_RS17430 (Psal104b_03454) | 36215..36658 | - | 444 | WP_036774901.1 | hypothetical protein | - |
| Psal104b_RS17435 (Psal104b_03455) | 37244..37537 | + | 294 | WP_036774899.1 | hypothetical protein | - |
| Psal104b_RS17440 (Psal104b_03456) | 37601..38389 | - | 789 | WP_047927050.1 | hypothetical protein | - |
| Psal104b_RS17445 (Psal104b_03457) | 38449..39012 | - | 564 | WP_036816706.1 | J domain-containing protein | - |
| Psal104b_RS17450 (Psal104b_03458) | 39081..39452 | - | 372 | WP_047927049.1 | hypothetical protein | - |
| Psal104b_RS17455 (Psal104b_03459) | 39879..40133 | + | 255 | WP_144420829.1 | hypothetical protein | - |
| Psal104b_RS17460 (Psal104b_03460) | 40310..42496 | + | 2187 | WP_027242581.1 | ATP-dependent RecD-like DNA helicase | - |
| Psal104b_RS17465 (Psal104b_03461) | 42506..42907 | - | 402 | WP_027242582.1 | helix-turn-helix domain-containing protein | - |
| Psal104b_RS17470 (Psal104b_03462) | 42904..43215 | - | 312 | WP_027242583.1 | type II toxin-antitoxin system HigB family toxin | - |
| Psal104b_RS17475 (Psal104b_03463) | 43572..43886 | - | 315 | WP_036774182.1 | WGR domain-containing protein | - |
| Psal104b_RS17480 (Psal104b_03464) | 43983..45845 | + | 1863 | WP_027242576.1 | RecX family transcriptional regulator | - |
| Psal104b_RS17485 (Psal104b_03465) | 45873..46364 | + | 492 | WP_155046642.1 | hypothetical protein | - |
| Psal104b_RS17490 (Psal104b_03466) | 46375..46602 | - | 228 | Protein_46 | integrase core domain-containing protein | - |
| Psal104b_RS17495 | 46598..46750 | + | 153 | WP_155046643.1 | IS30 family transposase IS4351 | Transposase |
| Psal104b_RS17500 (Psal104b_03467) | 46798..47805 | - | 1008 | WP_036774189.1 | IS3 family transposase ISGur10 | Transposase |
| Psal104b_RS17505 (Psal104b_03468) | 47805..48230 | - | 426 | WP_047927048.1 | IS3 family transposase ISGur10 | Transposase |
| Psal104b_RS17510 (Psal104b_03469) | 48472..49212 | + | 741 | WP_230382708.1 | IS30 family transposase IS1655 | Transposase |
| Psal104b_RS17515 (Psal104b_03470) | 49329..49793 | + | 465 | WP_036774631.1 | pyrimidine dimer DNA glycosylase/endonuclease V | - |
| Psal104b_RS17520 (Psal104b_03471) | 49861..49992 | - | 132 | Protein_52 | helix-turn-helix domain-containing protein | - |
| Psal104b_RS17525 | 50165..50269 | + | 105 | Protein_53 | transposase zinc-binding domain-containing protein | - |
| Psal104b_RS17530 (Psal104b_03473) | 51028..51159 | - | 132 | Protein_54 | IS30 family transposase ISLga1 | Transposase |
| Psal104b_RS17535 (Psal104b_03474) | 51332..51550 | + | 219 | WP_155046644.1 | hypothetical protein | - |
| Psal104b_RS17540 (Psal104b_03475) | 51876..52148 | - | 273 | WP_016211910.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| Psal104b_RS17545 (Psal104b_03476) | 52152..52412 | - | 261 | WP_032126795.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| Psal104b_RS17550 (Psal104b_03477) | 52685..53275 | + | 591 | WP_027242600.1 | site-specific integrase | - |
| Psal104b_RS17555 (Psal104b_03478) | 53303..54706 | - | 1404 | WP_048876031.1 | IS4 family transposase ISArch10 | Transposase |
| Psal104b_RS17560 | 55410..56375 | - | 966 | Protein_60 | IS982 family transposase | - |
| Psal104b_RS17565 (Psal104b_03481) | 56803..57927 | - | 1125 | WP_047927063.1 | hypothetical protein | - |
| Psal104b_RS17570 (Psal104b_03482) | 57927..58253 | - | 327 | WP_047927062.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|