MGE detailed information
MGE type: Mobilizable plasmid MGE length: 72060 bp
Accession: NZ_CP040124 Location: 1..72060 Organism: Klebsiella pneumoniae strain LSH-KPN148 Replicon: plasmid pLSH-KPN148-2
Accession: NZ_CP040124 Location: 1..72060 Organism: Klebsiella pneumoniae strain LSH-KPN148 Replicon: plasmid pLSH-KPN148-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FDY04_RS27655 () | 602..898 | + | 297 | WP_001272251.1 | hypothetical protein | - |
| FDY04_RS27660 () | 1009..1830 | + | 822 | WP_001234445.1 | DUF945 domain-containing protein | - |
| FDY04_RS27665 () | 2127..2774 | - | 648 | WP_015059008.1 | hypothetical protein | VF |
| FDY04_RS27670 () | 3051..3434 | + | 384 | WP_000124981.1 | relaxosome protein TraM | - |
| FDY04_RS27675 () | 3625..4311 | + | 687 | WP_015059009.1 | PAS domain-containing protein | - |
| FDY04_RS27680 () | 4405..4632 | + | 228 | WP_001254386.1 | conjugal transfer relaxosome protein TraY | - |
| FDY04_RS27685 () | 4666..5031 | + | 366 | WP_021519752.1 | type IV conjugative transfer system pilin TraA | - |
| FDY04_RS27690 () | 5046..5357 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| FDY04_RS27695 () | 5379..5945 | + | 567 | WP_000399794.1 | type IV conjugative transfer system protein TraE | - |
| FDY04_RS27700 () | 5956..6660 | + | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
| FDY04_RS27705 () | 6660..8087 | + | 1428 | WP_032297072.1 | conjugal transfer protein TraB | - |
| FDY04_RS27710 () | 8077..8667 | + | 591 | WP_000002778.1 | conjugal transfer protein TraP | - |
| FDY04_RS27715 () | 8621..8851 | + | 231 | WP_001352845.1 | conjugal transfer protein TrbD | - |
| FDY04_RS27720 () | 8863..9114 | + | 252 | WP_001038341.1 | conjugal transfer protein TrbG | - |
| FDY04_RS27725 () | 9111..9626 | + | 516 | WP_062955122.1 | type IV conjugative transfer system lipoprotein TraV | - |
| FDY04_RS27730 () | 9761..9982 | + | 222 | WP_001278692.1 | conjugal transfer protein TraR | - |
| FDY04_RS27735 () | 10142..12769 | + | 2628 | WP_015059012.1 | type IV secretion system protein TraC | - |
| FDY04_RS27740 () | 12766..13152 | + | 387 | WP_015059013.1 | type-F conjugative transfer system protein TrbI | - |
| FDY04_RS27745 () | 13149..13781 | + | 633 | WP_001203735.1 | type-F conjugative transfer system protein TraW | - |
| FDY04_RS27750 () | 13778..14770 | + | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| FDY04_RS27755 () | 14797..15105 | + | 309 | WP_000412447.1 | hypothetical protein | - |
| FDY04_RS27760 () | 15168..15689 | + | 522 | WP_015059014.1 | hypothetical protein | - |
| FDY04_RS27765 () | 15716..16354 | + | 639 | WP_000087532.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| FDY04_RS27770 () | 16351..16722 | + | 372 | WP_000056336.1 | hypothetical protein | - |
| FDY04_RS27775 () | 16748..17170 | + | 423 | WP_001229309.1 | HNH endonuclease | - |
| FDY04_RS27780 () | 17167..19017 | + | 1851 | WP_015059015.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| FDY04_RS27785 () | 19044..19301 | + | 258 | WP_053913405.1 | conjugal transfer protein TrbE | - |
| FDY04_RS27790 () | 19288..20037 | + | 750 | WP_072354014.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| FDY04_RS27795 () | 20153..20434 | + | 282 | WP_000549793.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| FDY04_RS27800 () | 20421..20966 | + | 546 | WP_000059817.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| FDY04_RS27805 () | 20896..21270 | + | 375 | WP_071776752.1 | P-type conjugative transfer protein TrbJ | - |
| FDY04_RS27810 () | 21224..21616 | + | 393 | WP_000126338.1 | F-type conjugal transfer protein TrbF | - |
| FDY04_RS27815 () | 21603..22031 | + | 429 | Protein_32 | conjugal transfer protein TraH | - |
| FDY04_RS27820 () | 22094..22798 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| FDY04_RS27825 () | 22878..23327 | + | 450 | Protein_34 | PAS domain-containing protein | - |
| FDY04_RS27830 () | 23395..24492 | - | 1098 | Protein_35 | TonB-dependent receptor | - |
| FDY04_RS27835 () | 24549..25517 | - | 969 | WP_200995689.1 | IS5 family transposase IS903B | Transposase |
| FDY04_RS27840 () | 25552..26427 | - | 876 | WP_013188475.1 | Beta-lactamase Toho-1 | ARG |
| FDY04_RS27845 () | 26677..26868 | - | 192 | Protein_38 | transposase | - |
| FDY04_RS27850 () | 26938..27642 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| FDY04_RS27855 () | 27708..28253 | + | 546 | Protein_40 | Tn3 family transposase TnpA_Tn3 | Transposase |
| FDY04_RS27860 () | 28289..28704 | - | 416 | Protein_41 | IS1 family transposase IS1R | Transposase |
| FDY04_RS27865 () | 28953..29354 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| FDY04_RS27870 () | 29287..29544 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| FDY04_RS27875 () | 29637..30290 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| FDY04_RS27880 () | 31229..32086 | - | 858 | WP_032495102.1 | incFII family plasmid replication initiator RepA | - |
| FDY04_RS27885 () | 32079..32153 | - | 75 | WP_001375168.1 | RepA leader peptide Tap | - |
| FDY04_RS27890 () | 32398..32646 | - | 249 | WP_000083837.1 | replication regulatory protein RepA | - |
| FDY04_RS27895 () | 32930..33079 | - | 150 | WP_001312851.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 33124..33183 | + | 60 | NuclAT_1 | - | Antitoxin Detail |
| - () | 33124..33183 | + | 60 | NuclAT_1 | - | Antitoxin Detail |
| - () | 33124..33183 | + | 60 | NuclAT_1 | - | Antitoxin Detail |
| - () | 33124..33183 | + | 60 | NuclAT_1 | - | Antitoxin Detail |
| FDY04_RS27900 () | 33384..33614 | - | 231 | WP_001736714.1 | hypothetical protein | - |
| FDY04_RS27905 () | 33778..34377 | - | 600 | WP_032083981.1 | hypothetical protein | - |
| FDY04_RS27910 () | 34763..34963 | - | 201 | WP_015059022.1 | hypothetical protein | - |
| FDY04_RS27915 () | 35095..35655 | - | 561 | WP_000139328.1 | fertility inhibition protein FinO | - |
| FDY04_RS27920 () | 35710..36456 | - | 747 | WP_000205770.1 | conjugal transfer pilus acetylase TraX | - |
| FDY04_RS27925 () | 36476..36637 | - | 162 | Protein_54 | DNA helicase | - |
| FDY04_RS27930 () | 36701..37405 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| FDY04_RS27935 () | 37476..39701 | - | 2226 | WP_000009363.1 | type IV conjugative transfer system coupling protein TraD | - |
| FDY04_RS27940 () | 39752..40489 | - | 738 | WP_015059020.1 | hypothetical protein | - |
| FDY04_RS27945 () | 40692..41423 | - | 732 | WP_021559024.1 | complement resistance protein TraT | - |
| FDY04_RS27950 () | 41448..41969 | - | 522 | WP_000632668.1 | conjugal transfer entry exclusion protein TraS | - |
| FDY04_RS27955 () | 42002..44818 | - | 2817 | WP_015059018.1 | conjugal transfer mating pair stabilization protein TraG | - |
| FDY04_RS27960 () | 44815..45771 | - | 957 | Protein_61 | conjugal transfer protein TraH | - |
| FDY04_RS27965 () | 45821..46525 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| FDY04_RS27970 () | 46981..47571 | - | 591 | Protein_63 | IS91 family transposase ISSbo1 | Transposase |
| FDY04_RS27975 () | 47636..48340 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| FDY04_RS27980 () | 48393..48911 | - | 519 | Protein_65 | IS91 family transposase ISSbo1 | Transposase |
| FDY04_RS27985 () | 48921..49109 | - | 189 | WP_000957857.1 | hypothetical protein | - |
| FDY04_RS27990 () | 49201..49737 | + | 537 | WP_064441864.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| FDY04_RS27995 () | 49920..50780 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| FDY04_RS28000 () | 50950..51705 | + | 756 | WP_012372818.1 | 16S rRNA (guanine(1405)-N(7))-methyltransferase | ARG |
| FDY04_RS28005 () | 51786..52067 | - | 282 | WP_015059004.1 | sodium/hydrogen exchanger | - |
| FDY04_RS28010 () | 52155..52859 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| FDY04_RS28840 () | 52925..52990 | + | 66 | Protein_72 | IS1 family transposase | - |
| FDY04_RS28020 () | 54439..54673 | + | 235 | Protein_73 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| FDY04_RS28025 () | 54801..55082 | + | 282 | WP_001333089.1 | hypothetical protein | - |
| FDY04_RS28030 () | 55205..55555 | - | 351 | WP_000361389.1 | plasmid partitioning/stability family protein | - |
| FDY04_RS28035 () | 55558..56520 | - | 963 | WP_000959884.1 | plasmid segregation protein ParM | - |
| FDY04_RS28040 () | 56667..56960 | + | 294 | WP_032146011.1 | hypothetical protein | - |
| FDY04_RS28045 () | 57037..57720 | + | 684 | WP_000085883.1 | DNA methylase | - |
| FDY04_RS28050 () | 57721..57942 | + | 222 | WP_001104881.1 | hypothetical protein | - |
| FDY04_RS28055 () | 57956..58390 | + | 435 | WP_000274503.1 | DUF1380 family protein | - |
| FDY04_RS28845 () | 58441..59217 | + | 777 | WP_001383963.1 | hypothetical protein | - |
| FDY04_RS28070 () | 59635..60060 | + | 426 | WP_001198928.1 | antirestriction protein | - |
| FDY04_RS28075 () | 60107..60529 | + | 423 | WP_000271762.1 | DUF1380 family protein | - |
| FDY04_RS28080 () | 60526..60717 | + | 192 | WP_001027493.1 | hypothetical protein | - |
| FDY04_RS28085 () | 61031..62698 | - | 1668 | WP_012372796.1 | group II intron reverse transcriptase/maturase | - |
| FDY04_RS28090 () | 64098..64328 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| FDY04_RS28095 () | 64380..65741 | + | 1362 | WP_000170695.1 | DUF3560 domain-containing protein | - |
| FDY04_RS28100 () | 65788..66351 | + | 564 | WP_015059007.1 | class I SAM-dependent methyltransferase | - |
| FDY04_RS28110 () | 67188..67715 | + | 528 | WP_000290834.1 | single-stranded DNA-binding protein | - |
| FDY04_RS28115 () | 67773..68006 | + | 234 | WP_000006003.1 | DUF905 family protein | - |
| FDY04_RS28120 () | 68067..70090 | + | 2024 | Protein_91 | ParB/RepB/Spo0J family partition protein | - |
| FDY04_RS28125 () | 70159..70593 | + | 435 | WP_000845953.1 | conjugation system SOS inhibitor PsiB | - |
| FDY04_RS28130 () | 70590..71309 | + | 720 | WP_001276217.1 | plasmid SOS inhibition protein A | - |
| - () | 71321..71545 | + | 225 | NuclAT_0 | - | - |
| - () | 71321..71545 | + | 225 | NuclAT_0 | - | - |
| - () | 71321..71545 | + | 225 | NuclAT_0 | - | - |
| - () | 71321..71545 | + | 225 | NuclAT_0 | - | - |
| FDY04_RS28135 () | 71589..71747 | + | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|