MGE detailed information
MGE type: Genomic_island MGE length: 21244 bp
Accession: NZ_CP040107 Location: 4817888..4839131 Organism: Escherichia coli O157:H7 strain MB9-1 Replicon: chromosome
Accession: NZ_CP040107 Location: 4817888..4839131 Organism: Escherichia coli O157:H7 strain MB9-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FDZ86_RS24195 () | 4813614..4814156 | + | 543 | WP_000934391.1 | hypothetical protein | - |
| FDZ86_RS24200 () | 4814449..4816599 | + | 2151 | WP_001298933.1 | pyruvate/proton symporter BtsT | - |
| FDZ86_RS24205 () | 4816649..4816852 | + | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| FDZ86_RS24210 () | 4816863..4817819 | + | 957 | WP_001297640.1 | GTPase | - |
| FDZ86_RS24215 () | 4817888..4819246 | - | 1359 | WP_001304004.1 | DUF262 domain-containing protein | - |
| FDZ86_RS24220 () | 4819255..4819539 | - | 285 | WP_001304005.1 | DUF262 domain-containing protein | - |
| FDZ86_RS24225 () | 4819817..4822249 | + | 2433 | WP_000819018.1 | DEAD/DEAH box helicase family protein | - |
| FDZ86_RS24230 () | 4822316..4823785 | + | 1470 | WP_001302468.1 | type I restriction-modification system subunit M | - |
| FDZ86_RS24235 () | 4823785..4825539 | + | 1755 | WP_000110082.1 | restriction endonuclease subunit S | - |
| - () | 4825689..4825765 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4825689..4825765 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4825689..4825765 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4825689..4825765 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4825689..4825765 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 4825689..4825765 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 4825689..4825765 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 4825689..4825765 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| FDZ86_RS24240 () | 4825760..4826101 | + | 342 | WP_000132630.1 | endoribonuclease SymE | Toxin Detail |
| FDZ86_RS24245 () | 4826148..4827311 | - | 1164 | WP_001304006.1 | DUF1524 domain-containing protein | - |
| FDZ86_RS24250 () | 4827359..4828240 | - | 882 | WP_001304007.1 | DUF262 domain-containing protein | - |
| FDZ86_RS24255 () | 4828337..4828501 | - | 165 | WP_000394274.1 | DUF1127 domain-containing protein | - |
| FDZ86_RS24260 () | 4828678..4830090 | + | 1413 | WP_000199295.1 | PLP-dependent aminotransferase family protein | - |
| FDZ86_RS24265 () | 4830333..4831315 | - | 983 | Protein_4748 | Recombination-promoting nuclease RpnD | VF |
| FDZ86_RS24270 () | 4831782..4833014 | + | 1233 | WP_001136983.1 | multidrug efflux MFS transporter MdtM | - |
| FDZ86_RS24275 () | 4833055..4834326 | + | 1272 | WP_001037406.1 | DUF445 domain-containing protein | - |
| FDZ86_RS24280 () | 4834442..4835593 | + | 1152 | WP_001302931.1 | 2-hydroxyacyl-CoA dehydratase subunit D | - |
| FDZ86_RS24285 () | 4835603..4836370 | + | 768 | WP_000222489.1 | hypothetical protein | - |
| FDZ86_RS24290 () | 4836367..4836633 | + | 267 | WP_000657677.1 | DUF3343 domain-containing protein | - |
| FDZ86_RS24295 () | 4836945..4839131 | + | 2187 | WP_000535053.1 | hypothetical protein | VF |
| FDZ86_RS24300 () | 4839397..4840239 | + | 843 | WP_000746206.1 | YjiK family protein | - |
| FDZ86_RS24305 () | 4840307..4841485 | + | 1179 | WP_001089435.1 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | NC_002655 | 5456776..5475497 | 0.003 | |||
| Escherichia coli O157:H7 str. Sakai | NC_002695 | 5426911..5445631 | 0.003 |