MGE detailed information
MGE type: Genomic_island MGE length: 27244 bp
Accession: NZ_CP040100 Location: 2381458..2408701 Organism: Vibrio parahaemolyticus strain LVP1 Replicon: chromosome
Accession: NZ_CP040100 Location: 2381458..2408701 Organism: Vibrio parahaemolyticus strain LVP1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FDP11_RS19935 () | 2376882..2378069 | + | 1188 | WP_025625694.1 | beta-ketoacyl-[acyl-carrier-protein] synthase family protein | - |
| FDP11_RS19940 () | 2378062..2378526 | + | 465 | WP_178982667.1 | hotdog family protein | - |
| FDP11_RS19945 () | 2378523..2379248 | + | 726 | WP_015296414.1 | 3-oxoacyl-ACP reductase FabG | - |
| FDP11_RS19950 () | 2379245..2380468 | + | 1224 | WP_021452981.1 | beta-ketoacyl-ACP synthase | - |
| FDP11_RS19955 () | 2380514..2381104 | - | 591 | WP_023624128.1 | membrane lipoprotein lipid attachment site-containing protein | - |
| FDP11_RS19960 () | 2381458..2382783 | + | 1326 | WP_178982669.1 | Prophage integrase IntS ; Integrase | Integrase |
| FDP11_RS19965 () | 2382977..2384305 | - | 1329 | WP_130546572.1 | type II toxin-antitoxin system HipA family toxin | Toxin Detail |
| FDP11_RS19970 () | 2384299..2384538 | - | 240 | WP_017788886.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| FDP11_RS19975 () | 2385131..2386939 | + | 1809 | WP_011079937.1 | ATP-binding protein | - |
| FDP11_RS19980 () | 2386948..2388255 | + | 1308 | WP_178982671.1 | HNH endonuclease | - |
| FDP11_RS19985 () | 2389459..2390643 | - | 1185 | WP_130546569.1 | HTH domain-containing protein | - |
| FDP11_RS19990 () | 2390749..2390940 | + | 192 | WP_081280710.1 | helix-turn-helix domain-containing protein | - |
| FDP11_RS19995 () | 2390953..2391744 | + | 792 | WP_130546568.1 | DNA repair protein | - |
| FDP11_RS20000 () | 2392286..2392810 | - | 525 | WP_130546567.1 | DNA repair protein | - |
| FDP11_RS20005 () | 2392953..2393183 | + | 231 | WP_130546566.1 | helix-turn-helix domain-containing protein | - |
| FDP11_RS20010 () | 2393375..2395819 | + | 2445 | WP_130546565.1 | DEAD/DEAH box helicase family protein | - |
| FDP11_RS20015 () | 2396399..2397748 | + | 1350 | WP_178982673.1 | hypothetical protein | - |
| FDP11_RS20020 () | 2397787..2398461 | - | 675 | WP_178982675.1 | site-specific DNA-methyltransferase | - |
| FDP11_RS20025 () | 2399127..2399501 | - | 375 | WP_130546562.1 | elongation factor Ts | - |
| FDP11_RS20030 () | 2399576..2399725 | + | 150 | WP_017790133.1 | hypothetical protein | - |
| FDP11_RS20035 () | 2399893..2400291 | - | 399 | WP_011079925.1 | hypothetical protein | - |
| FDP11_RS20040 () | 2400455..2401945 | + | 1491 | WP_178982677.1 | type I restriction-modification system subunit M | - |
| FDP11_RS20045 () | 2401945..2403687 | + | 1743 | WP_178982679.1 | restriction endonuclease subunit S | - |
| FDP11_RS20050 () | 2403956..2404858 | - | 903 | WP_130546559.1 | WYL domain-containing protein | - |
| FDP11_RS20055 () | 2405032..2406288 | + | 1257 | WP_130546558.1 | nucleotidyltransferase | - |
| FDP11_RS20060 () | 2406289..2406780 | + | 492 | WP_025522362.1 | hypothetical protein | - |
| FDP11_RS20065 () | 2406780..2407901 | + | 1122 | WP_013571340.1 | SAVED domain-containing protein | - |
| FDP11_RS20070 () | 2407913..2408701 | + | 789 | WP_178982681.1 | phosphatidylinositol kinase | - |
| FDP11_RS20080 () | 2409179..2410039 | + | 861 | WP_005460545.1 | bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD | - |
| FDP11_RS20085 () | 2410108..2411307 | - | 1200 | WP_005479028.1 | NupC/NupG family nucleoside CNT transporter | - |
| FDP11_RS20090 () | 2411613..2412557 | - | 945 | WP_005460577.1 | LysR family transcriptional regulator | - |
| FDP11_RS20095 () | 2412632..2413603 | - | 972 | WP_178982683.1 | lytic murein transglycosylase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|