MGE detailed information
MGE type: Prophage MGE length: 47023 bp
Accession: NZ_CP039992 Location: 1840917..1887939 Organism: Staphylococcus aureus strain Lr3 Replicon: chromosome
Accession: NZ_CP039992 Location: 1840917..1887939 Organism: Staphylococcus aureus strain Lr3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E1E63_RS08980 () | 1835936..1836682 | - | 747 | WP_002868962.1 | S9 family peptidase | - |
| E1E63_RS08985 () | 1836687..1837160 | - | 474 | WP_000672014.1 | nucleoside triphosphatase YtkD | - |
| E1E63_RS08990 () | 1837226..1837483 | + | 258 | WP_000718107.1 | membrane protein insertion efficiency factor YidD | - |
| E1E63_RS08995 () | 1837480..1838481 | - | 1002 | WP_000778508.1 | o-succinylbenzoate synthase | - |
| E1E63_RS09000 () | 1838486..1839964 | - | 1479 | WP_000348353.1 | o-succinylbenzoate--CoA ligase | - |
| E1E63_RS09005 () | 1840123..1840578 | - | 456 | WP_072460539.1 | DUF4909 domain-containing protein | - |
| E1E63_RS09010 () | 1840881..1841531 | + | 651 | WP_001829077.1 | excalibur calcium-binding domain-containing protein | - |
| E1E63_RS09015 () | 1841612..1842607 | + | 996 | WP_000070645.1 | DUF4352 domain-containing protein | - |
| E1E63_RS09020 () | 1842682..1843308 | + | 627 | WP_000669025.1 | hypothetical protein | - |
| E1E63_RS09025 () | 1843335..1844078 | + | 744 | WP_174840254.1 | Enterotoxin type E | VF |
| E1E63_RS09030 () | 1844105..1844857 | + | 753 | WP_000764922.1 | Enterotoxin type C-1 | VF |
| E1E63_RS09035 () | 1844989..1845546 | - | 558 | WP_000864141.1 | ImmA/IrrE family metallo-endopeptidase | - |
| E1E63_RS09040 () | 1845730..1846176 | - | 447 | WP_000747808.1 | DUF1433 domain-containing protein | - |
| E1E63_RS09045 () | 1846258..1846483 | - | 226 | Protein_1738 | hypothetical protein | - |
| E1E63_RS09050 () | 1846628..1846723 | + | 96 | WP_001801861.1 | type I toxin-antitoxin system Fst family toxin PepA1 | Toxin Detail |
| - () | 1846751..1846808 | - | 58 | - | - | Antitoxin Detail |
| E1E63_RS09055 () | 1847374..1849071 | - | 1698 | WP_000447924.1 | hypothetical protein | - |
| E1E63_RS09060 () | 1849049..1849903 | - | 855 | WP_001069960.1 | DNA adenine methylase | - |
| E1E63_RS09065 () | 1849942..1851207 | - | 1266 | WP_000072555.1 | restriction endonuclease subunit S | - |
| E1E63_RS09070 () | 1851200..1852756 | - | 1557 | WP_001837647.1 | type I restriction-modification system subunit M | - |
| E1E63_RS09075 () | 1853151..1853732 | + | 582 | WP_001092773.1 | DUF4888 domain-containing protein | - |
| E1E63_RS09080 () | 1854578..1855051 | + | 474 | WP_000550251.1 | hypothetical protein | - |
| E1E63_RS09085 () | 1855056..1855847 | + | 792 | WP_000543849.1 | DUF1828 domain-containing protein | - |
| E1E63_RS09090 () | 1856618..1856833 | + | 216 | Protein_1747 | hypothetical protein | - |
| E1E63_RS09095 () | 1857088..1857336 | + | 249 | Protein_1748 | hypothetical protein | - |
| E1E63_RS09100 () | 1857349..1858137 | + | 789 | WP_000206349.1 | DUF1828 domain-containing protein | - |
| E1E63_RS09105 () | 1858315..1858443 | + | 129 | WP_001792814.1 | IS3 family transposase | - |
| E1E63_RS09110 () | 1858971..1859465 | + | 495 | WP_001253430.1 | hypothetical protein | - |
| E1E63_RS09115 () | 1859543..1859779 | + | 237 | WP_000617703.1 | hypothetical protein | - |
| E1E63_RS09120 () | 1859800..1860576 | + | 777 | WP_000848317.1 | DUF1828 domain-containing protein | - |
| E1E63_RS09130 () | 1861128..1861904 | - | 777 | Protein_1754 | Enterotoxin type G | VF |
| E1E63_RS09135 () | 1862187..1862942 | - | 756 | WP_001236362.1 | Enterotoxin type A | VF |
| E1E63_RS09140 () | 1862981..1863751 | - | 771 | WP_000764689.1 | Enterotoxin type C-1 | VF |
| E1E63_RS09145 () | 1863905..1864633 | - | 729 | WP_000713846.1 | Enterotoxin type A | VF |
| E1E63_RS09150 () | 1864668..1865387 | - | 720 | WP_000821653.1 | Enterotoxin type D | VF |
| E1E63_RS09155 () | 1865668..1866450 | - | 783 | WP_010922839.1 | Enterotoxin type D | VF |
| E1E63_RS09200 () | 1867878..1868432 | - | 555 | WP_000132890.1 | alpha/beta hydrolase | - |
| E1E63_RS09210 () | 1868753..1870153 | - | 1401 | WP_000167526.1 | protoporphyrinogen oxidase | - |
| E1E63_RS09215 () | 1870177..1871100 | - | 924 | WP_000162879.1 | ferrochelatase | - |
| E1E63_RS09220 () | 1871158..1872192 | - | 1035 | WP_000551650.1 | uroporphyrinogen decarboxylase | - |
| E1E63_RS09225 () | 1872194..1872295 | - | 102 | WP_031867559.1 | hypothetical protein | - |
| E1E63_RS09230 () | 1872458..1872961 | + | 504 | WP_000737976.1 | signal transduction protein TRAP | - |
| E1E63_RS09235 () | 1873085..1874308 | - | 1224 | WP_000551840.1 | ABC transporter permease | - |
| E1E63_RS09240 () | 1874301..1875041 | - | 741 | WP_000216873.1 | ABC-type transporter ATP-binding protein EcsA | VF |
| E1E63_RS09245 () | 1875175..1875597 | + | 423 | WP_000004981.1 | HIT family protein | - |
| E1E63_RS09250 () | 1875739..1876104 | + | 366 | WP_000648118.1 | YtxH domain-containing protein | - |
| E1E63_RS09260 () | 1876837..1877394 | + | 558 | WP_000477953.1 | DUF3267 domain-containing protein | - |
| E1E63_RS09265 () | 1877599..1878561 | + | 963 | WP_000782121.1 | Foldase protein PrsA | VF |
| E1E63_RS09270 () | 1878682..1879623 | - | 942 | WP_001244175.1 | 3'-5' exoribonuclease YhaM | - |
| E1E63_RS09275 () | 1879620..1882556 | - | 2937 | WP_000584628.1 | AAA family ATPase | - |
| E1E63_RS09280 () | 1882546..1883742 | - | 1197 | WP_000238227.1 | exonuclease SbcCD subunit D | - |
| E1E63_RS09285 () | 1884033..1884131 | - | 99 | WP_031867558.1 | hypothetical protein | - |
| E1E63_RS09295 () | 1884780..1885124 | - | 345 | WP_000290301.1 | YlbF/YmcA family competence regulator | - |
| E1E63_RS09300 () | 1885193..1886317 | - | 1125 | WP_000992524.1 | DUF445 domain-containing protein | - |
| E1E63_RS09305 () | 1886496..1886960 | - | 465 | WP_000375864.1 | helix-turn-helix transcriptional regulator | - |
| E1E63_RS09310 () | 1887316..1887939 | - | 624 | WP_001045133.1 | Transcriptional regulatory protein LiaR | VF |
| E1E63_RS09315 () | 1887961..1889073 | - | 1113 | WP_000437967.1 | GAF domain-containing sensor histidine kinase | - |
| E1E63_RS09320 () | 1889236..1890057 | + | 822 | WP_000669376.1 | RluA family pseudouridine synthase | - |
| E1E63_RS09325 () | 1890516..1891901 | - | 1386 | WP_000116229.1 | class II fumarate hydratase | - |
| E1E63_RS09330 () | 1892097..1892492 | - | 396 | WP_000901023.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|