MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 95647 bp
Accession: NZ_CP039843 Location: 1..95647 Organism: Escherichia coli O157:H7 strain USDA5905 Replicon: plasmid pUSDA5905_1
Accession: NZ_CP039843 Location: 1..95647 Organism: Escherichia coli O157:H7 strain USDA5905 Replicon: plasmid pUSDA5905_1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E3175_RS27055 () | 1..1620 | - | 1620 | WP_174846762.1 | tail fiber protein | - |
| E3175_RS27060 () | 1632..2066 | - | 435 | WP_001286325.1 | hypothetical protein | - |
| E3175_RS27065 () | 2145..2981 | - | 837 | WP_001189832.1 | hypothetical protein | - |
| E3175_RS27070 () | 2981..4414 | - | 1434 | WP_000047570.1 | hypothetical protein | - |
| E3175_RS27075 () | 4411..4767 | - | 357 | WP_000002800.1 | hypothetical protein | - |
| E3175_RS27080 () | 4767..8141 | - | 3375 | WP_000440156.1 | transglycosylase SLT domain-containing protein | - |
| E3175_RS27085 () | 8223..9104 | - | 882 | WP_000926345.1 | hypothetical protein | - |
| E3175_RS27090 () | 9119..9730 | - | 612 | WP_000523975.1 | hypothetical protein | - |
| E3175_RS27095 () | 9741..10307 | - | 567 | WP_000188920.1 | hypothetical protein | - |
| E3175_RS27100 () | 10462..11631 | - | 1170 | WP_024174696.1 | SH3 domain-containing protein | - |
| E3175_RS27105 () | 11633..12139 | - | 507 | WP_000780957.1 | hypothetical protein | - |
| E3175_RS27110 () | 12228..12746 | - | 519 | WP_032346387.1 | hypothetical protein | - |
| E3175_RS27115 () | 13147..13368 | + | 222 | WP_000245708.1 | host cell division inhibitor Icd-like protein | - |
| E3175_RS27120 () | 13365..14408 | + | 1044 | WP_000743162.1 | phage antirepressor Ant | - |
| E3175_RS27125 () | 14573..15373 | + | 801 | WP_001187871.1 | phage antirepressor KilAC domain-containing protein | - |
| E3175_RS27130 () | 15403..16248 | + | 846 | WP_023154394.1 | hypothetical protein | - |
| E3175_RS27135 () | 16299..16544 | + | 246 | WP_001484177.1 | hypothetical protein | - |
| E3175_RS27140 () | 16726..16881 | + | 156 | WP_001313475.1 | type I toxin-antitoxin system toxin HokD | - |
| E3175_RS27145 () | 16998..17507 | - | 510 | WP_000509939.1 | hypothetical protein | - |
| E3175_RS27150 () | 17519..18100 | - | 582 | WP_000035301.1 | hypothetical protein | - |
| E3175_RS27155 () | 18136..18951 | - | 816 | WP_000041761.1 | hypothetical protein | - |
| E3175_RS27160 () | 18961..20550 | - | 1590 | WP_000085144.1 | hypothetical protein | - |
| E3175_RS27165 () | 20611..22317 | - | 1707 | WP_000067710.1 | hypothetical protein | - |
| E3175_RS27170 () | 22543..23544 | - | 1002 | WP_000038866.1 | ParB/RepB/Spo0J family partition protein | - |
| E3175_RS27175 () | 23561..24757 | - | 1197 | WP_001285362.1 | AAA family ATPase | - |
| E3175_RS27180 () | 25315..26175 | - | 861 | WP_001076427.1 | replication protein RepA | - |
| E3175_RS27185 () | 26502..26903 | - | 402 | WP_000458377.1 | hypothetical protein | - |
| E3175_RS27190 () | 26974..27333 | - | 360 | WP_001281923.1 | hypothetical protein | - |
| E3175_RS27195 () | 27345..27485 | - | 141 | WP_000336811.1 | hypothetical protein | - |
| E3175_RS27200 () | 27511..27933 | - | 423 | WP_000007769.1 | hypothetical protein | - |
| E3175_RS27205 () | 27973..28761 | - | 789 | WP_000890207.1 | hypothetical protein | - |
| E3175_RS27210 () | 29223..29507 | + | 285 | WP_001177862.1 | hypothetical protein | - |
| E3175_RS27215 () | 29500..30405 | + | 906 | WP_000472527.1 | recombination-associated protein RdgC | - |
| E3175_RS27220 () | 30402..32420 | + | 2019 | WP_000660970.1 | Dam family site-specific DNA-(adenine-N6)-methyltransferase | - |
| E3175_RS27235 () | 34395..35222 | + | 828 | WP_000751808.1 | hypothetical protein | - |
| E3175_RS27245 () | 35612..36976 | + | 1365 | WP_001276603.1 | replicative DNA helicase | - |
| E3175_RS27250 () | 36976..37974 | + | 999 | WP_001198666.1 | hypothetical protein | - |
| E3175_RS27255 () | 38021..38653 | - | 633 | WP_000535202.1 | baseplate protein | - |
| E3175_RS27260 () | 38646..39662 | - | 1017 | WP_000212018.1 | hypothetical protein | - |
| E3175_RS27265 () | 39664..40449 | - | 786 | WP_000602718.1 | hypothetical protein | - |
| E3175_RS27270 () | 40436..41164 | - | 729 | WP_000896795.1 | hypothetical protein | - |
| E3175_RS27275 () | 41168..42385 | - | 1218 | WP_001141898.1 | hypothetical protein | - |
| E3175_RS27280 () | 42395..42772 | - | 378 | WP_000235786.1 | hypothetical protein | - |
| E3175_RS27285 () | 42919..43164 | + | 246 | WP_000840931.1 | hypothetical protein | - |
| E3175_RS27290 () | 43167..43745 | + | 579 | WP_000943608.1 | VRR-NUC domain-containing protein | - |
| E3175_RS27295 () | 43812..43967 | + | 156 | WP_000096174.1 | hypothetical protein | - |
| E3175_RS27300 () | 44469..45095 | + | 627 | WP_000484110.1 | norphogenetic protein | - |
| E3175_RS27305 () | 45092..45769 | + | 678 | WP_024174695.1 | metallophosphoesterase | - |
| E3175_RS27310 () | 45766..46467 | + | 702 | WP_000684870.1 | hypothetical protein | - |
| E3175_RS27315 () | 46769..48031 | + | 1263 | WP_000633036.1 | hypothetical protein | - |
| E3175_RS27320 () | 48104..48610 | + | 507 | WP_000021766.1 | hypothetical protein | - |
| E3175_RS27325 () | 48805..49533 | + | 729 | WP_000675639.1 | hypothetical protein | - |
| E3175_RS27330 () | 49537..50415 | + | 879 | WP_024174694.1 | phosphoadenosine phosphosulfate reductase family protein | - |
| E3175_RS27335 () | 50412..50615 | + | 204 | WP_000158002.1 | hypothetical protein | - |
| E3175_RS27340 () | 50608..50847 | + | 240 | WP_000476205.1 | hypothetical protein | - |
| E3175_RS27345 () | 50844..51488 | + | 645 | WP_000071058.1 | hypothetical protein | - |
| E3175_RS27350 () | 51485..52183 | + | 699 | WP_000154832.1 | ead/Ea22-like family protein | - |
| E3175_RS27355 () | 52180..52470 | + | 291 | WP_001018057.1 | DUF4752 family protein | - |
| E3175_RS27360 () | 52467..53180 | + | 714 | WP_000672529.1 | hypothetical protein | - |
| E3175_RS27365 () | 53177..53476 | + | 300 | WP_000215167.1 | hypothetical protein | - |
| E3175_RS27370 () | 53478..54164 | + | 687 | WP_000161573.1 | ead/Ea22-like family protein | - |
| E3175_RS27375 () | 54166..54315 | + | 150 | WP_001151811.1 | hypothetical protein | - |
| E3175_RS27380 () | 54319..55335 | + | 1017 | WP_000208041.1 | hypothetical protein | - |
| E3175_RS27385 () | 55319..55603 | + | 285 | WP_001142394.1 | hypothetical protein | - |
| E3175_RS27390 () | 55588..55797 | - | 210 | WP_001344848.1 | hypothetical protein | - |
| E3175_RS27395 () | 55971..56222 | + | 252 | WP_001283837.1 | DNA polymerase III subunit theta | - |
| E3175_RS27400 () | 56346..56735 | + | 390 | WP_000506726.1 | DNA repair protein | - |
| E3175_RS27405 () | 56808..57029 | + | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| E3175_RS27410 () | 57029..57409 | + | 381 | WP_001216047.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| E3175_RS27415 () | 57414..57593 | + | 180 | WP_000113019.1 | hypothetical protein | - |
| E3175_RS27420 () | 57621..58664 | + | 1044 | WP_000644103.1 | DUF968 domain-containing protein | - |
| E3175_RS27425 () | 58753..59205 | + | 453 | WP_001312282.1 | late promoter-activating protein (Gp10) | - |
| E3175_RS27430 () | 59292..60485 | + | 1194 | WP_000219604.1 | terminase | - |
| E3175_RS27435 () | 60485..61969 | + | 1485 | WP_000124156.1 | hypothetical protein | - |
| E3175_RS27440 () | 61994..62845 | - | 852 | WP_000611656.1 | hypothetical protein | - |
| E3175_RS27445 () | 62956..63165 | - | 210 | WP_000874154.1 | hypothetical protein | - |
| E3175_RS27450 () | 63770..63991 | + | 222 | WP_000542332.1 | hypothetical protein | - |
| E3175_RS27455 () | 63999..65030 | + | 1032 | WP_000067529.1 | site-specific integrase | - |
| E3175_RS27460 () | 65081..65392 | + | 312 | WP_001224241.1 | hypothetical protein | - |
| E3175_RS27465 () | 65640..66200 | + | 561 | WP_000848368.1 | Ref family protein | - |
| E3175_RS27470 () | 66388..67029 | + | 642 | WP_001376241.1 | hypothetical protein | - |
| E3175_RS27475 () | 67179..70184 | - | 3006 | WP_001143775.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| E3175_RS27480 () | 70346..70903 | + | 558 | WP_001217881.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| E3175_RS27485 () | 71086..71946 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| E3175_RS27490 () | 72078..73343 | + | 1266 | WP_050555098.1 | SIR2 family protein | - |
| E3175_RS27495 () | 73385..73633 | - | 249 | WP_000747846.1 | hypothetical protein | - |
| E3175_RS27500 () | 73630..74070 | - | 441 | WP_000224043.1 | hypothetical protein | - |
| E3175_RS27505 () | 74104..80871 | - | 6768 | WP_001038173.1 | N-6 DNA methylase | - |
| E3175_RS27510 () | 80948..82657 | + | 1710 | WP_000774697.1 | hypothetical protein | - |
| E3175_RS27515 () | 82650..83669 | + | 1020 | WP_000132937.1 | head processing protein | - |
| E3175_RS27520 () | 83961..84518 | - | 558 | WP_001345478.1 | lysozyme | - |
| E3175_RS27525 () | 84688..85176 | + | 489 | WP_000068869.1 | single-stranded DNA-binding protein | - |
| E3175_RS27530 () | 85379..86167 | + | 789 | WP_000126782.1 | hypothetical protein | - |
| E3175_RS27535 () | 86160..87254 | + | 1095 | WP_000610387.1 | hypothetical protein | - |
| E3175_RS27540 () | 87286..87597 | - | 312 | WP_001165933.1 | hypothetical protein | - |
| E3175_RS27545 () | 87587..90574 | - | 2988 | WP_000058813.1 | hypothetical protein | - |
| E3175_RS27550 () | 90587..90952 | - | 366 | WP_000175491.1 | hypothetical protein | - |
| E3175_RS27555 () | 90949..92868 | - | 1920 | WP_000434689.1 | hypothetical protein | - |
| E3175_RS27560 () | 92870..93472 | - | 603 | WP_001345482.1 | hypothetical protein | - |
| E3175_RS27565 () | 93459..93902 | - | 444 | WP_000580776.1 | hypothetical protein | - |
| E3175_RS27570 () | 93899..94228 | - | 330 | WP_000887652.1 | holin | - |
| E3175_RS27575 () | 94303..94566 | - | 264 | WP_000145199.1 | hypothetical protein | - |
| E3175_RS27580 () | 95002..95574 | - | 573 | WP_001165547.1 | Tn3 family transposase TnpR_TnShfr1 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|