MGE detailed information
MGE type: Genomic_island MGE length: 21228 bp
Accession: NZ_CP039834 Location: 4810935..4832162 Organism: Escherichia coli O157:H7 strain MB41-1 Replicon: chromosome
Accession: NZ_CP039834 Location: 4810935..4832162 Organism: Escherichia coli O157:H7 strain MB41-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FCV42_RS24155 () | 4806661..4807203 | + | 543 | WP_000934391.1 | hypothetical protein | - |
| FCV42_RS24160 () | 4807496..4809646 | + | 2151 | WP_001298933.1 | pyruvate/proton symporter BtsT | - |
| FCV42_RS24165 () | 4809696..4809899 | + | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| FCV42_RS24170 () | 4809910..4810866 | + | 957 | WP_001297640.1 | GTPase | - |
| FCV42_RS24175 () | 4810935..4812293 | - | 1359 | WP_001304004.1 | DUF262 domain-containing protein | - |
| FCV42_RS24180 () | 4812302..4812586 | - | 285 | WP_001304005.1 | DUF262 domain-containing protein | - |
| FCV42_RS24185 () | 4812864..4815296 | + | 2433 | WP_000819018.1 | DEAD/DEAH box helicase family protein | - |
| FCV42_RS24190 () | 4815363..4816832 | + | 1470 | WP_001302468.1 | type I restriction-modification system subunit M | - |
| FCV42_RS24195 () | 4816832..4818586 | + | 1755 | WP_000110082.1 | restriction endonuclease subunit S | - |
| - () | 4818736..4818812 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4818736..4818812 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4818736..4818812 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4818736..4818812 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4818736..4818812 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 4818736..4818812 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 4818736..4818812 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 4818736..4818812 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| FCV42_RS24200 () | 4818807..4819148 | + | 342 | WP_000132630.1 | endoribonuclease SymE | Toxin Detail |
| FCV42_RS24205 () | 4819195..4820358 | - | 1164 | WP_001304006.1 | DUF1524 domain-containing protein | - |
| FCV42_RS24210 () | 4820406..4821287 | - | 882 | WP_001304007.1 | DUF262 domain-containing protein | - |
| FCV42_RS24215 () | 4821384..4821548 | - | 165 | WP_000394274.1 | DUF1127 domain-containing protein | - |
| FCV42_RS24220 () | 4821725..4823137 | + | 1413 | WP_000199295.1 | PLP-dependent aminotransferase family protein | - |
| FCV42_RS24225 () | 4823380..4823580 | - | 201 | WP_001310455.1 | hypothetical protein | - |
| FCV42_RS24230 () | 4823555..4824337 | - | 783 | WP_001303778.1 | hypothetical protein | VF |
| FCV42_RS24235 () | 4824804..4826036 | + | 1233 | WP_001136983.1 | multidrug efflux MFS transporter MdtM | - |
| FCV42_RS24240 () | 4826077..4827348 | + | 1272 | WP_001037406.1 | DUF445 domain-containing protein | - |
| FCV42_RS24245 () | 4827464..4828615 | + | 1152 | WP_001302931.1 | 2-hydroxyacyl-CoA dehydratase subunit D | - |
| FCV42_RS24250 () | 4828625..4829392 | + | 768 | WP_000222489.1 | hypothetical protein | - |
| FCV42_RS24255 () | 4829389..4829655 | + | 267 | WP_000657677.1 | DUF3343 domain-containing protein | - |
| FCV42_RS24260 () | 4829967..4832162 | + | 2196 | WP_000535069.1 | hypothetical protein | VF |
| FCV42_RS24265 () | 4832428..4833270 | + | 843 | WP_000746206.1 | YjiK family protein | - |
| FCV42_RS24270 () | 4833338..4834516 | + | 1179 | WP_001089435.1 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | NC_002655 | 5456776..5475497 | 0.003 | |||
| Escherichia coli O157:H7 str. Sakai | NC_002695 | 5426911..5445631 | 0.003 |