MGE detailed information
MGE type: Prophage MGE length: 65445 bp
Accession: NZ_CP039695 Location: 1306847..1372291 Organism: Novosphingobium sp. ABRDHK2 Replicon: chromosome
Accession: NZ_CP039695 Location: 1306847..1372291 Organism: Novosphingobium sp. ABRDHK2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FA702_RS06295 () | 1302867..1303412 | + | 546 | WP_136955432.1 | chemotaxis protein CheD | - |
| FA702_RS06300 () | 1303448..1303819 | + | 372 | WP_136955433.1 | response regulator | - |
| FA702_RS06305 () | 1303842..1304285 | + | 444 | WP_136955434.1 | chemotaxis protein CheW | - |
| FA702_RS06310 () | 1304302..1304556 | + | 255 | WP_124809279.1 | hypothetical protein | - |
| FA702_RS06315 () | 1304713..1305384 | + | 672 | WP_124809280.1 | glutathione S-transferase family protein | - |
| FA702_RS06320 () | 1305416..1306378 | - | 963 | WP_136955435.1 | complex I NDUFA9 subunit family protein | - |
| FA702_RS06330 () | 1306847..1308049 | + | 1203 | WP_136955436.1 | Prophage integrase IntS ; Integrase | Integrase |
| FA702_RS06335 () | 1308285..1309214 | - | 930 | WP_136955437.1 | retron St85 family RNA-directed DNA polymerase | - |
| FA702_RS06340 () | 1309202..1310152 | - | 951 | WP_210417598.1 | retron St85 family effector protein | - |
| FA702_RS06345 () | 1310611..1310853 | - | 243 | WP_136955439.1 | hypothetical protein | - |
| FA702_RS06350 () | 1311092..1311922 | + | 831 | WP_136955440.1 | HNH endonuclease | - |
| FA702_RS06355 () | 1311971..1312378 | - | 408 | WP_136955441.1 | hypothetical protein | - |
| FA702_RS06360 () | 1312380..1312763 | - | 384 | WP_136955442.1 | DUF3768 domain-containing protein | - |
| FA702_RS06365 () | 1312760..1312948 | - | 189 | WP_136955443.1 | hypothetical protein | - |
| FA702_RS06370 () | 1313526..1316906 | + | 3381 | WP_136955444.1 | type I restriction-modification system endonuclease | - |
| FA702_RS06375 () | 1316906..1317232 | + | 327 | WP_210417599.1 | type I restriction-modification system subunit M N-terminal domain-containing protein | - |
| FA702_RS06380 () | 1317337..1318110 | + | 774 | Protein_1258 | IS21 family transposase ISRsp3 | Transposase |
| FA702_RS06385 () | 1318370..1319833 | + | 1464 | WP_162832905.1 | IS21 family transposase ISAli13 | Transposase |
| FA702_RS06390 () | 1319833..1320642 | + | 810 | WP_009823666.1 | IS21 family transposase ISAli13 | Transposase |
| FA702_RS06395 () | 1320904..1321653 | + | 750 | Protein_1261 | IS21 family transposase ISRsp3 | Transposase |
| FA702_RS06400 () | 1321643..1322422 | + | 780 | WP_006955904.1 | IS21 family transposase ISRsp3 | Transposase |
| FA702_RS06405 () | 1322506..1324692 | - | 2187 | WP_136957284.1 | AAA family ATPase | - |
| FA702_RS06410 () | 1325065..1325256 | - | 192 | WP_023836545.1 | AlpA family phage regulatory protein | - |
| FA702_RS06415 () | 1325745..1326662 | - | 918 | WP_136955445.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| FA702_RS06420 () | 1326667..1327455 | - | 789 | WP_136955446.1 | type IV toxin-antitoxin system AbiEi family antitoxin | - |
| FA702_RS06425 () | 1327621..1328241 | - | 621 | WP_136955447.1 | thermonuclease family protein | - |
| FA702_RS06430 () | 1328222..1329367 | - | 1146 | WP_136955448.1 | hypothetical protein | - |
| FA702_RS06435 () | 1329551..1329796 | - | 246 | WP_136955449.1 | helix-turn-helix domain-containing protein | - |
| FA702_RS06440 () | 1330352..1331596 | + | 1245 | WP_136955450.1 | Prophage integrase IntA ; Integrase | Integrase |
| FA702_RS06445 () | 1331633..1331950 | - | 318 | WP_136955451.1 | MbcA/ParS/Xre antitoxin family protein | - |
| FA702_RS06450 () | 1332084..1332353 | + | 270 | WP_136955452.1 | helix-turn-helix domain-containing protein | - |
| FA702_RS06455 () | 1332356..1333666 | + | 1311 | WP_136955453.1 | type II toxin-antitoxin system HipA family toxin | - |
| FA702_RS06460 () | 1333912..1334700 | - | 789 | WP_136955454.1 | IS21 family transposase ISRsp3 | Transposase |
| FA702_RS06465 () | 1334868..1335020 | + | 153 | WP_136957285.1 | helix-turn-helix domain-containing protein | - |
| FA702_RS06470 () | 1335352..1335624 | + | 273 | Protein_1276 | DUF4102 domain-containing protein | - |
| FA702_RS06480 () | 1336901..1337440 | + | 540 | Protein_1278 | hypothetical protein | - |
| FA702_RS06485 () | 1337574..1338569 | + | 996 | WP_168196008.1 | DUF4238 domain-containing protein | - |
| FA702_RS06490 () | 1338571..1339023 | - | 453 | WP_136955457.1 | hypothetical protein | - |
| FA702_RS06495 () | 1339363..1340232 | - | 870 | WP_136955458.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| FA702_RS06500 () | 1340225..1340845 | - | 621 | WP_136955459.1 | AbiEi antitoxin N-terminal domain-containing protein | Antitoxin Detail |
| FA702_RS06505 () | 1341280..1342059 | - | 780 | WP_006955904.1 | IS21 family transposase ISRsp3 | Transposase |
| FA702_RS06510 () | 1342072..1343001 | - | 930 | WP_136955460.1 | DUF935 family protein | - |
| FA702_RS06515 () | 1343004..1343396 | - | 393 | WP_136955461.1 | hypothetical protein | - |
| FA702_RS06520 () | 1343396..1344868 | - | 1473 | WP_136955462.1 | terminase family protein | - |
| FA702_RS06525 () | 1344868..1345407 | - | 540 | WP_136955463.1 | DUF3486 family protein | - |
| FA702_RS06530 () | 1345409..1345699 | - | 291 | WP_136955464.1 | hypothetical protein | - |
| FA702_RS06535 () | 1345696..1346058 | - | 363 | WP_136955465.1 | DUF2730 family protein | - |
| FA702_RS06540 () | 1346204..1346686 | - | 483 | WP_136955466.1 | hypothetical protein | - |
| FA702_RS06545 () | 1346689..1347381 | - | 693 | WP_136955467.1 | regulatory protein GemA | - |
| FA702_RS06550 () | 1347374..1347646 | - | 273 | WP_136955468.1 | hypothetical protein | - |
| FA702_RS06555 () | 1347643..1347900 | - | 258 | WP_136955469.1 | hypothetical protein | - |
| FA702_RS06560 () | 1347897..1348652 | - | 756 | WP_136955470.1 | hypothetical protein | - |
| FA702_RS06565 () | 1348708..1349268 | - | 561 | WP_168196009.1 | host-nuclease inhibitor Gam family protein | - |
| FA702_RS06570 () | 1349474..1349884 | - | 411 | WP_136955472.1 | hypothetical protein | - |
| FA702_RS06575 () | 1349900..1350496 | - | 597 | WP_136955473.1 | hypothetical protein | - |
| FA702_RS06580 () | 1350493..1350705 | - | 213 | WP_136955474.1 | hypothetical protein | - |
| FA702_RS06585 () | 1350708..1351478 | - | 771 | WP_136955475.1 | ATP-binding protein | - |
| FA702_RS06590 () | 1351529..1353331 | - | 1803 | WP_168196010.1 | hypothetical protein ; Integrase | Integrase |
| FA702_RS06595 () | 1353340..1353723 | - | 384 | WP_136955477.1 | hypothetical protein | - |
| FA702_RS06600 () | 1353769..1354008 | - | 240 | WP_136955478.1 | helix-turn-helix domain-containing protein | - |
| FA702_RS06605 () | 1354048..1354815 | + | 768 | WP_136955479.1 | hypothetical protein | - |
| FA702_RS06610 () | 1354844..1355191 | + | 348 | WP_136955480.1 | hypothetical protein | - |
| FA702_RS06615 () | 1355188..1355757 | - | 570 | WP_136955481.1 | hypothetical protein | - |
| FA702_RS06620 () | 1356004..1356969 | + | 966 | WP_136955482.1 | hypothetical protein | - |
| FA702_RS06625 () | 1357014..1357349 | + | 336 | WP_136955483.1 | DUF2190 family protein | - |
| FA702_RS06630 () | 1357457..1358386 | + | 930 | WP_136955484.1 | hypothetical protein | - |
| FA702_RS06635 () | 1358469..1359119 | + | 651 | WP_136955485.1 | hypothetical protein | - |
| FA702_RS06640 () | 1359147..1359887 | + | 741 | WP_136955486.1 | DUF1320 domain-containing protein | - |
| FA702_RS06645 () | 1359884..1360393 | + | 510 | WP_136955487.1 | phage virion morphogenesis protein | - |
| FA702_RS06650 () | 1360390..1360809 | + | 420 | WP_136955488.1 | hypothetical protein | - |
| FA702_RS06655 () | 1360806..1361024 | + | 219 | WP_136955489.1 | hypothetical protein | - |
| FA702_RS06660 () | 1361017..1361952 | + | 936 | WP_136955490.1 | hypothetical protein | - |
| FA702_RS06665 () | 1362087..1362473 | + | 387 | WP_136955491.1 | histidine kinase | - |
| FA702_RS06670 () | 1362566..1362832 | + | 267 | WP_136957286.1 | DUF1799 domain-containing protein | - |
| FA702_RS06675 () | 1362829..1366521 | + | 3693 | WP_136955492.1 | hypothetical protein | - |
| FA702_RS06680 () | 1366521..1369163 | + | 2643 | WP_136955493.1 | hypothetical protein | - |
| FA702_RS06685 () | 1369163..1369468 | + | 306 | WP_136955494.1 | hypothetical protein | - |
| FA702_RS06690 () | 1369471..1370130 | + | 660 | WP_136955495.1 | hypothetical protein | - |
| FA702_RS06695 () | 1370144..1370377 | + | 234 | WP_136955496.1 | hypothetical protein | - |
| FA702_RS06700 () | 1370379..1370747 | + | 369 | WP_136955497.1 | hypothetical protein | - |
| FA702_RS06705 () | 1370747..1371517 | + | 771 | WP_136955498.1 | hypothetical protein | - |
| FA702_RS06710 () | 1371680..1372291 | + | 612 | WP_136955499.1 | lysozyme | - |
| FA702_RS06715 () | 1372304..1372672 | + | 369 | WP_136955500.1 | hypothetical protein | - |
| FA702_RS06720 () | 1372674..1374041 | + | 1368 | WP_168196011.1 | hypothetical protein | - |
| FA702_RS06725 () | 1374054..1374278 | + | 225 | WP_136955502.1 | hypothetical protein | - |
| FA702_RS06730 () | 1374453..1374647 | + | 195 | WP_136955503.1 | hypothetical protein | - |
| FA702_RS06735 () | 1374845..1375294 | - | 450 | WP_136955504.1 | helix-turn-helix domain-containing protein | - |
| FA702_RS06745 () | 1375686..1376630 | + | 945 | WP_136955505.1 | peptidylprolyl isomerase | - |
| FA702_RS06750 () | 1376627..1376953 | + | 327 | WP_136955506.1 | DUF1905 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|