MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 94000 bp
Accession: NZ_CP039583 Location: 1..94000 Organism: Salmonella enterica subsp. enterica serovar 14[5]12:i:- strain PNCS014858 Replicon: plasmid PNCS014858 strain 14[5]12:i:-
Accession: NZ_CP039583 Location: 1..94000 Organism: Salmonella enterica subsp. enterica serovar 14[5]12:i:- strain PNCS014858 Replicon: plasmid PNCS014858 strain 14[5]12:i:-
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E5O01_RS24460 () | 1..741 | + | 741 | WP_063503128.1 | type-F conjugative transfer system secretin TraK | - |
| E5O01_RS24465 () | 741..2747 | + | 2007 | WP_136614731.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| E5O01_RS24470 () | 2725..2970 | + | 246 | WP_010999944.1 | DUF2689 domain-containing protein | - |
| E5O01_RS24475 () | 2967..3482 | + | 516 | WP_001079995.1 | type IV conjugative transfer system lipoprotein TraV | - |
| E5O01_RS24480 () | 3617..3838 | + | 222 | WP_001278699.1 | conjugal transfer protein TraR | - |
| E5O01_RS24485 () | 3831..4298 | + | 468 | WP_000549562.1 | hypothetical protein | - |
| E5O01_RS24490 () | 4415..4678 | + | 264 | WP_001239256.1 | hypothetical protein | - |
| E5O01_RS24495 () | 4694..7342 | + | 2649 | WP_000793310.1 | type IV secretion system protein TraC | - |
| E5O01_RS24500 () | 7317..7703 | + | 387 | WP_000105164.1 | type-F conjugative transfer system protein TrbI | - |
| E5O01_RS24505 () | 7700..8332 | + | 633 | WP_000871995.1 | type-F conjugative transfer system protein TraW | - |
| E5O01_RS24510 () | 8329..9321 | + | 993 | WP_000833320.1 | conjugal transfer pilus assembly protein TraU | - |
| E5O01_RS24515 () | 9340..9648 | + | 309 | WP_010999945.1 | hypothetical protein | - |
| E5O01_RS24520 () | 9633..10271 | + | 639 | WP_000554823.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| E5O01_RS24525 () | 10308..10727 | + | 420 | WP_001229397.1 | HNH endonuclease | - |
| E5O01_RS24530 () | 10724..12550 | + | 1827 | WP_000827528.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| E5O01_RS24535 () | 12561..12776 | + | 216 | WP_000700023.1 | conjugal transfer protein TrbE | - |
| E5O01_RS24540 () | 12788..13537 | + | 750 | WP_001226854.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| E5O01_RS24545 () | 13751..14044 | + | 294 | WP_001233881.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| E5O01_RS24550 () | 14031..14579 | + | 549 | WP_022743183.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| E5O01_RS24555 () | 14569..15951 | + | 1383 | WP_001161719.1 | conjugal transfer protein TraH | - |
| E5O01_RS24560 () | 15948..18770 | + | 2823 | WP_001007086.1 | conjugal transfer mating pair stabilization protein TraG | - |
| E5O01_RS24565 () | 18786..19280 | + | 495 | WP_010999946.1 | entry exclusion protein | - |
| E5O01_RS24570 () | 19316..20047 | + | 732 | WP_022743186.1 | complement resistance protein TraT | - |
| E5O01_RS24575 () | 20424..22694 | + | 2271 | WP_023139332.1 | type IV conjugative transfer system coupling protein TraD | - |
| E5O01_RS24580 () | 22703..23101 | - | 399 | WP_000911322.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| E5O01_RS24585 () | 23101..23331 | - | 231 | WP_001526804.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| E5O01_RS24590 () | 23410..28668 | + | 5259 | WP_022743192.1 | conjugative transfer relaxase/helicase TraI | - |
| E5O01_RS24595 () | 28688..29428 | + | 741 | WP_000177629.1 | conjugal transfer pilus acetylase TraX | - |
| E5O01_RS24600 () | 29483..30046 | + | 564 | WP_000139307.1 | fertility inhibition protein FinO | - |
| E5O01_RS24605 () | 30161..30445 | + | 285 | WP_000477658.1 | hypothetical protein | - |
| E5O01_RS24610 () | 30458..30613 | + | 156 | WP_000983042.1 | hypothetical protein | - |
| E5O01_RS24615 () | 30779..31221 | + | 443 | Protein_32 | phospholipase | - |
| E5O01_RS24625 () | 31400..31666 | + | 267 | WP_010999936.1 | replication regulatory protein RepA | - |
| E5O01_RS24630 () | 31916..31993 | + | 78 | WP_001541552.1 | RepA leader peptide Tap | - |
| E5O01_RS24635 () | 31974..32855 | + | 882 | WP_001738692.1 | incFII family plasmid replication initiator RepA | - |
| E5O01_RS24645 () | 33715..33936 | + | 222 | WP_071533052.1 | SdiA-regulated domain-containing protein | - |
| E5O01_RS24650 () | 34033..34791 | - | 759 | WP_000417898.1 | AraC family transcriptional regulator | - |
| E5O01_RS24655 () | 35058..35615 | - | 558 | WP_000725062.1 | complement resistance protein Rck | - |
| E5O01_RS24660 () | 35705..36604 | - | 900 | WP_010999938.1 | YjiK family protein | - |
| E5O01_RS24670 () | 36737..37390 | - | 654 | WP_000178592.1 | DsbA family protein | - |
| E5O01_RS24675 () | 37635..37985 | - | 351 | WP_001526811.1 | helix-turn-helix transcriptional regulator | - |
| E5O01_RS24680 () | 37970..38182 | - | 213 | WP_000004313.1 | transcriptional regulator PefI | - |
| E5O01_RS24685 () | 38614..39489 | - | 876 | WP_014343944.1 | hypothetical protein | - |
| E5O01_RS24690 () | 39742..40299 | - | 558 | WP_010999940.1 | membrane protein | - |
| E5O01_RS24695 () | 40314..41006 | - | 693 | WP_001038510.1 | fimbrial chaperone PefD | - |
| E5O01_RS24700 () | 40999..43407 | - | 2409 | WP_000007893.1 | outer membrane usher protein PefC | - |
| E5O01_RS24705 () | 43635..44153 | - | 519 | WP_000748205.1 | major pilin PefA | - |
| E5O01_RS24710 () | 44428..44730 | - | 303 | WP_000979451.1 | transcriptional regulator PefB | - |
| E5O01_RS24720 () | 45449..45830 | + | 382 | Protein_49 | NirD/YgiW/YdeI family stress tolerance protein | - |
| E5O01_RS24725 () | 46107..46443 | + | 337 | Protein_50 | site-specific integrase | - |
| E5O01_RS24730 () | 46702..47691 | - | 990 | WP_001527061.1 | RepB family plasmid replication initiator protein | - |
| E5O01_RS24735 () | 48185..48481 | - | 297 | WP_001687482.1 | hypothetical protein | - |
| E5O01_RS24745 () | 48965..49486 | - | 522 | WP_010999942.1 | hypothetical protein | - |
| E5O01_RS24750 () | 50162..50380 | + | 219 | WP_000813641.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| E5O01_RS24755 () | 50382..50687 | + | 306 | WP_001159863.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| E5O01_RS24760 () | 50689..50979 | + | 291 | WP_001266176.1 | hypothetical protein | - |
| E5O01_RS24765 () | 50976..51497 | + | 522 | WP_000198608.1 | hypothetical protein | - |
| E5O01_RS24770 () | 51532..52314 | + | 783 | WP_000082169.1 | site-specific integrase | - |
| E5O01_RS24775 () | 52323..53036 | + | 714 | Protein_59 | EAL domain-containing protein | - |
| E5O01_RS24785 () | 53040..53549 | + | 510 | WP_001541544.1 | CaiF/GrlA family transcriptional regulator | - |
| E5O01_RS24790 () | 53543..54028 | + | 486 | WP_000905606.1 | membrane protein | - |
| E5O01_RS24795 () | 54305..54592 | - | 288 | WP_071530243.1 | hypothetical protein | - |
| E5O01_RS24800 () | 54748..55308 | + | 561 | WP_000900095.1 | inverse autotransporter beta domain-containing protein | - |
| E5O01_RS24805 () | 55375..55725 | - | 351 | WP_001541541.1 | helix-turn-helix domain-containing protein | - |
| E5O01_RS24810 () | 55782..56206 | + | 425 | Protein_65 | IS200/IS605 family transposase | - |
| E5O01_RS24815 () | 56333..56983 | - | 651 | WP_001575489.1 | SPI-2 type III secretion system effector cysteine hydrolase SpvD | - |
| E5O01_RS24820 () | 57244..57969 | - | 726 | WP_001122242.1 | type III secretion system effector phosphothreonine lyase SpvC | - |
| E5O01_RS24825 () | 58250..60025 | - | 1776 | WP_001676648.1 | SPI-2 type III secretion system effector NAD(+)--protein-arginine ADP-ribosyltransferase SpvB | - |
| E5O01_RS24830 () | 60207..60974 | - | 768 | WP_001526990.1 | virulence protein SpvA | - |
| E5O01_RS24835 () | 61148..61312 | - | 165 | WP_001576629.1 | glycoside hydrolase family protein | - |
| E5O01_RS24840 () | 61486..62379 | - | 894 | WP_000346691.1 | virulence genes transcriptional activator SpvR | - |
| E5O01_RS24845 () | 62988..64025 | + | 1038 | WP_001121399.1 | IS630 family transposase | - |
| E5O01_RS24850 () | 64214..65239 | - | 1026 | WP_001576625.1 | ExeA family protein | - |
| E5O01_RS24855 () | 65172..66836 | - | 1665 | WP_000098783.1 | IS481 family transposase | - |
| E5O01_RS24860 () | 66820..67380 | - | 561 | WP_001240331.1 | recombinase family protein | - |
| E5O01_RS24865 () | 67587..68327 | - | 741 | WP_001541566.1 | carbonic anhydrase | - |
| E5O01_RS24875 () | 68982..69470 | - | 489 | WP_001135407.1 | hypothetical protein | - |
| E5O01_RS24880 () | 69729..70844 | + | 1116 | WP_001247118.1 | DNA-binding protein | - |
| E5O01_RS24885 () | 70930..71346 | + | 417 | WP_001541564.1 | hypothetical protein | - |
| E5O01_RS24890 () | 71530..71865 | + | 336 | WP_001527010.1 | hypothetical protein | - |
| E5O01_RS24895 () | 71922..72488 | + | 567 | WP_001541562.1 | DUF2913 family protein | - |
| E5O01_RS24900 () | 72520..73461 | - | 942 | WP_000728917.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| E5O01_RS24905 () | 73876..75081 | + | 1206 | WP_000427676.1 | AAA family ATPase | - |
| E5O01_RS24910 () | 75081..76055 | + | 975 | WP_000064274.1 | ParB/RepB/Spo0J family partition protein | - |
| E5O01_RS24915 () | 76137..77411 | - | 1275 | WP_022743179.1 | Y-family DNA polymerase | - |
| E5O01_RS24920 () | 77411..77833 | - | 423 | WP_000925627.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| E5O01_RS24925 () | 78344..78814 | + | 471 | WP_000490265.1 | hypothetical protein | - |
| E5O01_RS24930 () | 78807..79163 | + | 357 | WP_000369839.1 | hypothetical protein | - |
| E5O01_RS24940 () | 79545..80225 | + | 681 | WP_000088645.1 | DNA methylase | - |
| E5O01_RS24945 () | 80225..80446 | + | 222 | WP_001109588.1 | hypothetical protein | - |
| E5O01_RS24950 () | 80502..80915 | + | 414 | WP_000990114.1 | DUF1380 family protein | - |
| E5O01_RS24955 () | 80987..81751 | + | 765 | WP_001246548.1 | membrane protein | - |
| E5O01_RS24965 () | 82190..82681 | + | 492 | WP_161972453.1 | antirestriction protein | - |
| E5O01_RS24970 () | 82748..83182 | + | 435 | WP_000274533.1 | DUF1380 family protein | - |
| E5O01_RS24975 () | 83418..83741 | + | 324 | WP_000015983.1 | DNA polymerase III subunit theta | - |
| E5O01_RS24990 () | 84502..85020 | + | 519 | WP_000741240.1 | single-stranded DNA-binding protein SSB2 | - |
| E5O01_RS24995 () | 85075..85317 | + | 243 | WP_000131520.1 | DUF905 domain-containing protein | - |
| E5O01_RS25000 () | 85386..87383 | + | 1998 | WP_000117513.1 | ParB/RepB/Spo0J family partition protein | - |
| E5O01_RS25005 () | 87423..87857 | + | 435 | WP_010999943.1 | conjugation system SOS inhibitor PsiB | - |
| E5O01_RS25010 () | 87854..88591 | + | 738 | WP_000581933.1 | plasmid SOS inhibition protein A | - |
| E5O01_RS25015 () | 89101..89502 | + | 402 | Protein_101 | DUF945 domain-containing protein | - |
| E5O01_RS25020 () | 89564..89919 | + | 356 | Protein_102 | DUF945 domain-containing protein | - |
| E5O01_RS25025 () | 90230..90700 | - | 471 | WP_001526856.1 | transglycosylase SLT domain-containing protein | - |
| E5O01_RS25035 () | 91115..91495 | + | 381 | WP_001151546.1 | relaxosome protein TraM | - |
| E5O01_RS25040 () | 91688..92374 | + | 687 | WP_000336297.1 | PAS domain-containing protein | - |
| E5O01_RS25045 () | 92469..92696 | + | 228 | WP_001676655.1 | conjugal transfer relaxosome protein TraY | - |
| E5O01_RS25050 () | 92738..93100 | + | 363 | WP_001274201.1 | type IV conjugative transfer system pilin TraA | - |
| E5O01_RS25055 () | 93115..93426 | + | 312 | WP_000012129.1 | type IV conjugative transfer system protein TraL | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|