MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 81938 bp
Accession: NZ_CP039481 Location: 1..81938 Organism: Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000958 Replicon: plasmid pCFSAN000958
Accession: NZ_CP039481 Location: 1..81938 Organism: Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000958 Replicon: plasmid pCFSAN000958
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E3398_RS23025 () | 1..780 | + | 780 | WP_004558353.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| E3398_RS23030 () | 802..1413 | + | 612 | WP_020833552.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| E3398_RS23035 () | 1413..2774 | + | 1362 | WP_020833551.1 | F-type conjugal transfer protein TraH | - |
| E3398_RS23040 () | 2776..5673 | + | 2898 | WP_020833550.1 | conjugal transfer mating pair stabilization protein TraG | - |
| E3398_RS23045 () | 5685..6245 | + | 561 | WP_020833549.1 | hypothetical protein | - |
| E3398_RS23050 () | 6421..7158 | + | 738 | WP_020833548.1 | complement resistance protein TraT | - |
| E3398_RS23055 () | 7309..9543 | + | 2235 | WP_020833547.1 | type IV conjugative transfer system coupling protein TraD | - |
| E3398_RS23060 () | 9543..14846 | + | 5304 | WP_020833546.1 | conjugative transfer relaxase/helicase TraI | - |
| E3398_RS23065 () | 14865..15431 | + | 567 | WP_000493830.1 | DUF2726 domain-containing protein | - |
| E3398_RS23070 () | 15428..16159 | + | 732 | WP_020833545.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| E3398_RS23075 () | 16399..16869 | + | 471 | Protein_11 | phospholipase D family protein | - |
| E3398_RS23080 () | 17013..17278 | + | 266 | Protein_12 | replication regulatory protein RepA | - |
| E3398_RS23085 () | 17528..17605 | + | 78 | WP_001541552.1 | RepA leader peptide Tap | - |
| E3398_RS23090 () | 17586..18467 | + | 882 | WP_023193063.1 | incFII family plasmid replication initiator RepA | - |
| E3398_RS23100 () | 19423..19692 | + | 270 | WP_000084547.1 | hypothetical protein | Antitoxin Detail |
| E3398_RS23105 () | 19689..19970 | + | 282 | WP_000970006.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin Detail |
| E3398_RS23110 () | 20122..20712 | - | 591 | WP_031607984.1 | plasmid pRiA4b ORF-3 family protein | - |
| E3398_RS23115 () | 21957..22466 | + | 510 | WP_131535394.1 | hypothetical protein | - |
| E3398_RS23120 () | 22775..23647 | + | 873 | WP_077915507.1 | helix-turn-helix transcriptional regulator | - |
| E3398_RS23125 () | 23844..24545 | + | 702 | WP_023251326.1 | transcriptional activator SprB | - |
| E3398_RS23130 () | 24726..25118 | - | 393 | Protein_21 | transposase family protein | - |
| E3398_RS23135 () | 25134..26594 | - | 1461 | WP_000834698.1 | hypothetical protein | - |
| E3398_RS23140 () | 27076..27561 | - | 486 | Protein_23 | transposase | - |
| E3398_RS23555 () | 27651..28109 | - | 459 | WP_086790286.1 | LysR family transcriptional regulator | - |
| E3398_RS23560 () | 28474..28779 | - | 306 | WP_023193066.1 | hypothetical protein | - |
| E3398_RS23150 () | 28767..28937 | - | 171 | Protein_26 | transposase | - |
| E3398_RS23155 () | 29084..29329 | - | 246 | WP_131535392.1 | hypothetical protein | - |
| E3398_RS23165 () | 30548..30695 | + | 148 | Protein_28 | transposase | - |
| E3398_RS23170 () | 30852..33278 | - | 2427 | WP_000471149.1 | fimbrial biogenesis outer membrane usher protein | - |
| E3398_RS23175 () | 33298..34005 | - | 708 | WP_020833592.1 | molecular chaperone | - |
| E3398_RS23180 () | 34381..35580 | + | 1200 | WP_020833591.1 | IS256 family transposase | - |
| E3398_RS23185 () | 35660..36211 | - | 552 | WP_020833590.1 | hypothetical protein | - |
| E3398_RS23190 () | 36905..39652 | + | 2748 | WP_023193067.1 | inverse autotransporter beta domain-containing protein | - |
| E3398_RS23195 () | 39664..40716 | + | 1053 | WP_020833588.1 | Ig-like domain-containing protein | - |
| E3398_RS23200 () | 40915..41217 | + | 303 | WP_136585220.1 | autoinducer binding domain-containing protein | - |
| E3398_RS23205 () | 41198..41764 | + | 567 | WP_136585221.1 | autoinducer binding domain-containing protein | - |
| E3398_RS23210 () | 42552..42923 | + | 372 | WP_100215268.1 | DUF1311 domain-containing protein | - |
| E3398_RS23215 () | 43743..43961 | + | 219 | WP_000813642.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| E3398_RS23220 () | 43963..44268 | + | 306 | WP_020833585.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| E3398_RS23225 () | 44577..45359 | + | 783 | WP_020833584.1 | site-specific integrase | - |
| E3398_RS23230 () | 45510..46451 | - | 942 | WP_000728920.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| E3398_RS23235 () | 47082..47336 | + | 255 | WP_001749329.1 | hypothetical protein | - |
| E3398_RS23240 () | 48025..49230 | + | 1206 | WP_000427674.1 | AAA family ATPase | - |
| E3398_RS23245 () | 49230..50204 | + | 975 | WP_020833582.1 | ParB/RepB/Spo0J family partition protein | - |
| E3398_RS23250 () | 50286..51560 | - | 1275 | WP_020833581.1 | Y-family DNA polymerase | - |
| E3398_RS23255 () | 51560..51983 | - | 424 | Protein_46 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| E3398_RS23260 () | 52163..52834 | - | 672 | WP_020833580.1 | SOS response-associated peptidase family protein | - |
| E3398_RS23265 () | 53194..53871 | + | 678 | WP_020833579.1 | DNA methylase | - |
| E3398_RS23270 () | 53871..54092 | + | 222 | WP_020833578.1 | hypothetical protein | - |
| E3398_RS23275 () | 54103..54522 | + | 420 | WP_020833577.1 | DUF1380 domain-containing protein | - |
| E3398_RS23280 () | 54577..55356 | + | 780 | WP_020833576.1 | hypothetical protein | - |
| E3398_RS23285 () | 55762..56268 | + | 507 | WP_020833575.1 | antirestriction protein ArdA | - |
| E3398_RS23290 () | 56311..56502 | + | 192 | WP_020833574.1 | hypothetical protein | - |
| E3398_RS23295 () | 56695..56948 | + | 254 | Protein_54 | DNA polymerase III subunit theta | - |
| E3398_RS23300 () | 56983..57299 | + | 317 | Protein_55 | hypothetical protein | - |
| E3398_RS23565 () | 57440..57661 | - | 222 | WP_114053208.1 | hypothetical protein | - |
| E3398_RS23310 () | 57992..58546 | + | 555 | WP_020833571.1 | single-stranded DNA-binding protein | - |
| E3398_RS23315 () | 58599..58841 | + | 243 | WP_024143550.1 | DUF905 domain-containing protein | - |
| E3398_RS23320 () | 58912..60945 | + | 2034 | WP_020833569.1 | ParB/RepB/Spo0J family partition protein | - |
| E3398_RS23325 () | 60986..61420 | + | 435 | WP_015059789.1 | conjugation system SOS inhibitor PsiB | - |
| E3398_RS23330 () | 61417..62145 | + | 729 | WP_020833568.1 | plasmid SOS inhibition protein A | - |
| E3398_RS23335 () | 62142..62495 | + | 354 | WP_020833567.1 | hypothetical protein | - |
| E3398_RS23570 () | 63054..63305 | - | 252 | WP_186363344.1 | hypothetical protein | - |
| E3398_RS23345 () | 63949..64353 | + | 405 | WP_020833565.1 | hypothetical protein | - |
| E3398_RS23350 () | 64410..64757 | + | 348 | WP_000550116.1 | hypothetical protein | - |
| E3398_RS23355 () | 64852..64998 | + | 147 | WP_001159046.1 | hypothetical protein | - |
| E3398_RS23360 () | 65045..65869 | + | 825 | WP_020833564.1 | N-6 DNA methylase | - |
| E3398_RS23365 () | 66516..67046 | + | 531 | WP_000556935.1 | antirestriction protein | - |
| E3398_RS23370 () | 67057..67512 | - | 456 | WP_020833563.1 | transglycosylase SLT domain-containing protein | - |
| E3398_RS23375 () | 67981..68361 | + | 381 | WP_020833562.1 | relaxosome protein TraM | - |
| E3398_RS23380 () | 68657..69106 | + | 450 | WP_020833561.1 | helix-turn-helix domain-containing protein | - |
| E3398_RS23385 () | 69312..69545 | + | 234 | WP_000662610.1 | TraY domain-containing protein | - |
| E3398_RS23390 () | 69662..70021 | + | 360 | WP_001054221.1 | type IV conjugative transfer system pilin TraA | - |
| E3398_RS23395 () | 70023..70328 | + | 306 | WP_000398849.1 | type IV conjugative transfer system protein TraL | - |
| E3398_RS23400 () | 70348..70911 | + | 564 | WP_001535119.1 | type IV conjugative transfer system protein TraE | - |
| E3398_RS23405 () | 70901..71641 | + | 741 | WP_020833560.1 | type-F conjugative transfer system secretin TraK | - |
| E3398_RS23410 () | 71628..72989 | + | 1362 | WP_000024509.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| E3398_RS23415 () | 73100..73324 | + | 225 | WP_008455352.1 | TraR/DksA C4-type zinc finger protein | - |
| E3398_RS23420 () | 73328..73780 | + | 453 | WP_020833558.1 | hypothetical protein | - |
| E3398_RS23425 () | 73798..74412 | + | 615 | WP_020833557.1 | type IV conjugative transfer system lipoprotein TraV | - |
| E3398_RS23430 () | 74423..77014 | + | 2592 | WP_001808381.1 | type IV secretion system protein TraC | - |
| E3398_RS23435 () | 77011..77475 | + | 465 | WP_024143549.1 | type-F conjugative transfer system protein TrbI | - |
| E3398_RS23440 () | 77475..78110 | + | 636 | WP_000715590.1 | type-F conjugative transfer system protein TraW | - |
| E3398_RS23445 () | 78107..79102 | + | 996 | WP_004558357.1 | conjugal transfer pilus assembly protein TraU | - |
| E3398_RS23450 () | 79113..79481 | + | 369 | WP_020833555.1 | hypothetical protein | - |
| E3398_RS23455 () | 79478..80092 | + | 615 | WP_020833554.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|