MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 81940 bp
Accession: NZ_CP039479 Location: 1..81940 Organism: Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000960 Replicon: plasmid pCFSAN000960
Accession: NZ_CP039479 Location: 1..81940 Organism: Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000960 Replicon: plasmid pCFSAN000960
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E3395_RS23020 () | 1..255 | + | 255 | WP_001749329.1 | hypothetical protein | - |
| E3395_RS23025 () | 944..2149 | + | 1206 | WP_000427674.1 | AAA family ATPase | - |
| E3395_RS23030 () | 2149..3123 | + | 975 | WP_020833582.1 | ParB/RepB/Spo0J family partition protein | - |
| E3395_RS23035 () | 3205..4479 | - | 1275 | WP_020833581.1 | Y-family DNA polymerase | - |
| E3395_RS23040 () | 4479..4902 | - | 424 | Protein_4 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| E3395_RS23045 () | 5082..5753 | - | 672 | WP_020833580.1 | SOS response-associated peptidase family protein | - |
| E3395_RS23050 () | 6113..6790 | + | 678 | WP_020833579.1 | DNA methylase | - |
| E3395_RS23055 () | 6790..7011 | + | 222 | WP_020833578.1 | hypothetical protein | - |
| E3395_RS23060 () | 7022..7441 | + | 420 | WP_020833577.1 | DUF1380 domain-containing protein | - |
| E3395_RS23065 () | 7496..8275 | + | 780 | WP_020833576.1 | hypothetical protein | - |
| E3395_RS23070 () | 8681..9187 | + | 507 | WP_020833575.1 | antirestriction protein ArdA | - |
| E3395_RS23075 () | 9230..9421 | + | 192 | WP_020833574.1 | hypothetical protein | - |
| E3395_RS23080 () | 9614..9867 | + | 254 | Protein_12 | DNA polymerase III subunit theta | - |
| E3395_RS23085 () | 9902..10218 | + | 317 | Protein_13 | hypothetical protein | - |
| E3395_RS23560 () | 10359..10580 | - | 222 | WP_114053208.1 | hypothetical protein | - |
| E3395_RS23095 () | 10911..11465 | + | 555 | WP_020833571.1 | single-stranded DNA-binding protein | - |
| E3395_RS23100 () | 11518..11760 | + | 243 | WP_024143550.1 | DUF905 domain-containing protein | - |
| E3395_RS23105 () | 11831..13864 | + | 2034 | WP_020833569.1 | ParB/RepB/Spo0J family partition protein | - |
| E3395_RS23110 () | 13905..14339 | + | 435 | WP_015059789.1 | conjugation system SOS inhibitor PsiB | - |
| E3395_RS23115 () | 14336..15064 | + | 729 | WP_020833568.1 | plasmid SOS inhibition protein A | - |
| E3395_RS23120 () | 15061..15414 | + | 354 | WP_020833567.1 | hypothetical protein | - |
| E3395_RS23125 () | 15769..16143 | + | 375 | WP_020833566.1 | hypothetical protein | - |
| E3395_RS23130 () | 16869..17273 | + | 405 | WP_020833565.1 | hypothetical protein | - |
| E3395_RS23135 () | 17330..17677 | + | 348 | WP_000550116.1 | hypothetical protein | - |
| E3395_RS23140 () | 17772..17918 | + | 147 | WP_001159046.1 | hypothetical protein | - |
| E3395_RS23145 () | 17965..18789 | + | 825 | WP_020833564.1 | N-6 DNA methylase | - |
| E3395_RS23150 () | 19436..19966 | + | 531 | WP_000556935.1 | antirestriction protein | - |
| E3395_RS23155 () | 19977..20432 | - | 456 | WP_020833563.1 | transglycosylase SLT domain-containing protein | - |
| E3395_RS23160 () | 20901..21281 | + | 381 | WP_020833562.1 | relaxosome protein TraM | - |
| E3395_RS23165 () | 21578..22027 | + | 450 | WP_020833561.1 | helix-turn-helix domain-containing protein | - |
| E3395_RS23170 () | 22233..22466 | + | 234 | WP_000662610.1 | TraY domain-containing protein | - |
| E3395_RS23175 () | 22583..22942 | + | 360 | WP_001054221.1 | type IV conjugative transfer system pilin TraA | - |
| E3395_RS23180 () | 22944..23249 | + | 306 | WP_000398849.1 | type IV conjugative transfer system protein TraL | - |
| E3395_RS23185 () | 23269..23832 | + | 564 | WP_001535119.1 | type IV conjugative transfer system protein TraE | - |
| E3395_RS23190 () | 23822..24562 | + | 741 | WP_020833560.1 | type-F conjugative transfer system secretin TraK | - |
| E3395_RS23195 () | 24549..25910 | + | 1362 | WP_000024509.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| E3395_RS23200 () | 26021..26245 | + | 225 | WP_008455352.1 | TraR/DksA C4-type zinc finger protein | - |
| E3395_RS23205 () | 26249..26701 | + | 453 | WP_020833558.1 | hypothetical protein | - |
| E3395_RS23210 () | 26719..27333 | + | 615 | WP_020833557.1 | type IV conjugative transfer system lipoprotein TraV | - |
| E3395_RS23215 () | 27344..29935 | + | 2592 | WP_001808381.1 | type IV secretion system protein TraC | - |
| E3395_RS23220 () | 29932..30396 | + | 465 | WP_024143549.1 | type-F conjugative transfer system protein TrbI | - |
| E3395_RS23225 () | 30396..31031 | + | 636 | WP_000715590.1 | type-F conjugative transfer system protein TraW | - |
| E3395_RS23230 () | 31028..32023 | + | 996 | WP_004558357.1 | conjugal transfer pilus assembly protein TraU | - |
| E3395_RS23235 () | 32034..32402 | + | 369 | WP_020833555.1 | hypothetical protein | - |
| E3395_RS23240 () | 32399..33013 | + | 615 | WP_020833554.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| E3395_RS23245 () | 33010..34863 | + | 1854 | WP_020833553.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| E3395_RS23250 () | 34860..35639 | + | 780 | WP_004558353.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| E3395_RS23255 () | 35661..36272 | + | 612 | WP_020833552.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| E3395_RS23260 () | 36272..37633 | + | 1362 | WP_020833551.1 | F-type conjugal transfer protein TraH | - |
| E3395_RS23265 () | 37635..40532 | + | 2898 | WP_020833550.1 | conjugal transfer mating pair stabilization protein TraG | - |
| E3395_RS23270 () | 40544..40842 | + | 299 | Protein_50 | protein traS | - |
| E3395_RS23280 () | 41406..42143 | + | 738 | WP_020833548.1 | complement resistance protein TraT | - |
| E3395_RS23285 () | 42294..44528 | + | 2235 | WP_020833547.1 | type IV conjugative transfer system coupling protein TraD | - |
| E3395_RS23290 () | 44528..49831 | + | 5304 | WP_020833546.1 | conjugative transfer relaxase/helicase TraI | - |
| E3395_RS23295 () | 49850..50416 | + | 567 | WP_000493830.1 | DUF2726 domain-containing protein | - |
| E3395_RS23300 () | 50413..51144 | + | 732 | WP_020833545.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| E3395_RS23305 () | 51384..51854 | + | 471 | Protein_56 | phospholipase D family protein | - |
| E3395_RS23310 () | 51998..52264 | + | 267 | WP_001576653.1 | replication regulatory protein RepA | - |
| E3395_RS23315 () | 52514..52591 | + | 78 | WP_001541552.1 | RepA leader peptide Tap | - |
| E3395_RS23320 () | 52572..53453 | + | 882 | WP_023193063.1 | incFII family plasmid replication initiator RepA | - |
| E3395_RS23330 () | 54409..54678 | + | 270 | WP_000084547.1 | hypothetical protein | Antitoxin Detail |
| E3395_RS23335 () | 54675..54956 | + | 282 | WP_000970006.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin Detail |
| E3395_RS23340 () | 55108..55698 | - | 591 | WP_031607984.1 | plasmid pRiA4b ORF-3 family protein | - |
| E3395_RS23345 () | 56944..57453 | + | 510 | WP_131535394.1 | hypothetical protein | - |
| E3395_RS23350 () | 57762..58283 | + | 522 | WP_136537703.1 | hypothetical protein | - |
| E3395_RS23355 () | 58280..58633 | + | 354 | WP_157782941.1 | helix-turn-helix transcriptional regulator | - |
| E3395_RS23360 () | 58830..59531 | + | 702 | WP_023251326.1 | transcriptional activator SprB | - |
| E3395_RS23365 () | 59712..60104 | - | 393 | Protein_67 | transposase family protein | - |
| E3395_RS23370 () | 60120..61580 | - | 1461 | WP_000834698.1 | hypothetical protein | - |
| E3395_RS23375 () | 62062..62547 | - | 486 | Protein_69 | transposase | - |
| E3395_RS23565 () | 62637..63095 | - | 459 | WP_086790286.1 | LysR family transcriptional regulator | - |
| E3395_RS23570 () | 63460..63765 | - | 306 | WP_023193066.1 | hypothetical protein | - |
| E3395_RS23385 () | 63753..63923 | - | 171 | Protein_72 | transposase | - |
| E3395_RS23390 () | 64070..64315 | - | 246 | WP_131535392.1 | hypothetical protein | - |
| E3395_RS23400 () | 65534..65681 | + | 148 | Protein_74 | transposase | - |
| E3395_RS23405 () | 65838..68264 | - | 2427 | WP_000471149.1 | fimbrial biogenesis outer membrane usher protein | - |
| E3395_RS23410 () | 68284..68991 | - | 708 | WP_020833592.1 | molecular chaperone | - |
| E3395_RS23415 () | 69367..70566 | + | 1200 | WP_020833591.1 | IS256 family transposase | - |
| E3395_RS23420 () | 70646..71197 | - | 552 | WP_020833590.1 | hypothetical protein | - |
| E3395_RS23425 () | 71891..74638 | + | 2748 | WP_023193067.1 | inverse autotransporter beta domain-containing protein | - |
| E3395_RS23430 () | 74650..75702 | + | 1053 | WP_020833588.1 | Ig-like domain-containing protein | - |
| E3395_RS23435 () | 75901..76623 | + | 723 | WP_000742239.1 | LuxR C-terminal-related transcriptional regulator | - |
| E3395_RS23440 () | 77411..77782 | + | 372 | WP_100215268.1 | DUF1311 domain-containing protein | - |
| E3395_RS23445 () | 78602..78820 | + | 219 | WP_000813642.1 | type II toxin-antitoxin system antitoxin CcdA | - |
| E3395_RS23450 () | 78822..79127 | + | 306 | WP_020833585.1 | type II toxin-antitoxin system toxin CcdB | - |
| E3395_RS23455 () | 79436..80218 | + | 783 | WP_020833584.1 | site-specific integrase | - |
| E3395_RS23460 () | 80369..81310 | - | 942 | WP_000728920.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|