MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 81900 bp
Accession: NZ_CP039474 Location: 1..81900 Organism: Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000968 Replicon: plasmid pCFSAN000968_1
Accession: NZ_CP039474 Location: 1..81900 Organism: Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000968 Replicon: plasmid pCFSAN000968_1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E3396_RS23020 () | 1..1461 | + | 1461 | WP_000834698.1 | hypothetical protein | - |
| E3396_RS23025 () | 1477..1869 | + | 393 | Protein_1 | transposase family protein | - |
| E3396_RS23030 () | 2050..2751 | - | 702 | WP_023251326.1 | transcriptional activator SprB | - |
| E3396_RS23035 () | 2948..3301 | - | 354 | WP_157782941.1 | helix-turn-helix transcriptional regulator | - |
| E3396_RS23040 () | 3298..3819 | - | 522 | WP_136537703.1 | hypothetical protein | - |
| E3396_RS23045 () | 4128..4637 | - | 510 | WP_131535394.1 | hypothetical protein | - |
| E3396_RS23050 () | 5883..6473 | + | 591 | WP_031607984.1 | plasmid pRiA4b ORF-3 family protein | - |
| E3396_RS23055 () | 6625..6906 | - | 282 | WP_000970006.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin Detail |
| E3396_RS23060 () | 6903..7172 | - | 270 | WP_000084547.1 | hypothetical protein | Antitoxin Detail |
| E3396_RS23070 () | 8128..9009 | - | 882 | WP_023193063.1 | incFII family plasmid replication initiator RepA | - |
| E3396_RS23075 () | 8990..9067 | - | 78 | WP_001541552.1 | RepA leader peptide Tap | - |
| E3396_RS23080 () | 9317..9583 | - | 267 | WP_001576653.1 | replication regulatory protein RepA | - |
| E3396_RS23085 () | 9727..10197 | - | 471 | Protein_12 | phospholipase D family protein | - |
| E3396_RS23090 () | 10437..11168 | - | 732 | WP_020833545.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| E3396_RS23095 () | 11165..11731 | - | 567 | WP_000493830.1 | DUF2726 domain-containing protein | - |
| E3396_RS23100 () | 11750..17053 | - | 5304 | WP_020833546.1 | conjugative transfer relaxase/helicase TraI | - |
| E3396_RS23105 () | 17053..19287 | - | 2235 | WP_020833547.1 | type IV conjugative transfer system coupling protein TraD | - |
| E3396_RS23110 () | 19438..20175 | - | 738 | WP_020833548.1 | complement resistance protein TraT | - |
| E3396_RS23115 () | 20351..20911 | - | 561 | WP_020833549.1 | hypothetical protein | - |
| E3396_RS23120 () | 20923..23820 | - | 2898 | WP_020833550.1 | conjugal transfer mating pair stabilization protein TraG | - |
| E3396_RS23125 () | 23822..25183 | - | 1362 | WP_020833551.1 | F-type conjugal transfer protein TraH | - |
| E3396_RS23130 () | 25183..25794 | - | 612 | WP_020833552.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| E3396_RS23135 () | 25816..26595 | - | 780 | WP_004558353.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| E3396_RS23140 () | 26592..28445 | - | 1854 | WP_020833553.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| E3396_RS23145 () | 28442..29056 | - | 615 | WP_020833554.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| E3396_RS23150 () | 29053..29421 | - | 369 | WP_020833555.1 | hypothetical protein | - |
| E3396_RS23155 () | 29432..30427 | - | 996 | WP_004558357.1 | conjugal transfer pilus assembly protein TraU | - |
| E3396_RS23160 () | 30424..31059 | - | 636 | WP_000715590.1 | type-F conjugative transfer system protein TraW | - |
| E3396_RS23165 () | 31059..31523 | - | 465 | WP_024143549.1 | type-F conjugative transfer system protein TrbI | - |
| E3396_RS23170 () | 31520..34111 | - | 2592 | WP_001808381.1 | type IV secretion system protein TraC | - |
| E3396_RS23175 () | 34122..34736 | - | 615 | WP_020833557.1 | type IV conjugative transfer system lipoprotein TraV | - |
| E3396_RS23180 () | 34754..35206 | - | 453 | WP_020833558.1 | hypothetical protein | - |
| E3396_RS23185 () | 35210..35434 | - | 225 | WP_008455352.1 | TraR/DksA C4-type zinc finger protein | - |
| E3396_RS23190 () | 35545..36906 | - | 1362 | WP_000024509.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| E3396_RS23195 () | 36893..37633 | - | 741 | WP_020833560.1 | type-F conjugative transfer system secretin TraK | - |
| E3396_RS23200 () | 37623..38186 | - | 564 | WP_001535119.1 | type IV conjugative transfer system protein TraE | - |
| E3396_RS23205 () | 38206..38511 | - | 306 | WP_000398849.1 | type IV conjugative transfer system protein TraL | - |
| E3396_RS23210 () | 38513..38872 | - | 360 | WP_001054221.1 | type IV conjugative transfer system pilin TraA | - |
| E3396_RS23215 () | 38989..39222 | - | 234 | WP_000662610.1 | TraY domain-containing protein | - |
| E3396_RS23220 () | 39428..39877 | - | 450 | WP_020833561.1 | helix-turn-helix domain-containing protein | - |
| E3396_RS23225 () | 40174..40554 | - | 381 | WP_020833562.1 | relaxosome protein TraM | - |
| E3396_RS23230 () | 41023..41460 | + | 438 | Protein_41 | transglycosylase SLT domain-containing protein | - |
| E3396_RS23235 () | 41576..42106 | - | 531 | WP_000556935.1 | antirestriction protein | - |
| E3396_RS23240 () | 42753..43577 | - | 825 | WP_020833564.1 | N-6 DNA methylase | - |
| E3396_RS23245 () | 43624..43770 | - | 147 | WP_001159046.1 | hypothetical protein | - |
| E3396_RS23250 () | 43865..44212 | - | 348 | WP_000550116.1 | hypothetical protein | - |
| E3396_RS23255 () | 44269..44673 | - | 405 | WP_020833565.1 | hypothetical protein | - |
| E3396_RS23260 () | 45398..45772 | - | 375 | WP_020833566.1 | hypothetical protein | - |
| E3396_RS23265 () | 46127..46480 | - | 354 | WP_020833567.1 | hypothetical protein | - |
| E3396_RS23270 () | 46477..47205 | - | 729 | WP_020833568.1 | plasmid SOS inhibition protein A | - |
| E3396_RS23275 () | 47202..47636 | - | 435 | WP_015059789.1 | conjugation system SOS inhibitor PsiB | - |
| E3396_RS23280 () | 47677..49710 | - | 2034 | WP_020833569.1 | ParB/RepB/Spo0J family partition protein | - |
| E3396_RS23285 () | 49781..50023 | - | 243 | WP_024143550.1 | DUF905 domain-containing protein | - |
| E3396_RS23290 () | 50076..50630 | - | 555 | WP_020833571.1 | single-stranded DNA-binding protein | - |
| E3396_RS24200 () | 50961..51182 | + | 222 | WP_114053208.1 | hypothetical protein | - |
| E3396_RS23300 () | 51323..51639 | - | 317 | Protein_55 | hypothetical protein | - |
| E3396_RS23305 () | 51674..51927 | - | 254 | Protein_56 | DNA polymerase III subunit theta | - |
| E3396_RS23310 () | 52120..52311 | - | 192 | WP_020833574.1 | hypothetical protein | - |
| E3396_RS23315 () | 52354..52860 | - | 507 | WP_020833575.1 | antirestriction protein ArdA | - |
| E3396_RS23320 () | 53266..54045 | - | 780 | WP_020833576.1 | hypothetical protein | - |
| E3396_RS23325 () | 54100..54519 | - | 420 | WP_020833577.1 | DUF1380 domain-containing protein | - |
| E3396_RS23330 () | 54530..54751 | - | 222 | WP_020833578.1 | hypothetical protein | - |
| E3396_RS23335 () | 54751..55428 | - | 678 | WP_020833579.1 | DNA methylase | - |
| E3396_RS23340 () | 55788..56459 | + | 672 | WP_020833580.1 | SOS response-associated peptidase family protein | - |
| E3396_RS23345 () | 56639..57062 | + | 424 | Protein_64 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| E3396_RS23350 () | 57062..58336 | + | 1275 | WP_020833581.1 | Y-family DNA polymerase | - |
| E3396_RS23355 () | 58418..59392 | - | 975 | WP_020833582.1 | ParB/RepB/Spo0J family partition protein | - |
| E3396_RS23360 () | 59392..60597 | - | 1206 | WP_000427674.1 | AAA family ATPase | - |
| E3396_RS23365 () | 61286..61540 | - | 255 | WP_001749329.1 | hypothetical protein | - |
| E3396_RS23370 () | 62171..63112 | + | 942 | WP_000728920.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| E3396_RS23375 () | 63263..64045 | - | 783 | WP_020833584.1 | site-specific integrase | - |
| E3396_RS23380 () | 64354..64659 | - | 306 | WP_020833585.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| E3396_RS23385 () | 64661..64879 | - | 219 | WP_000813642.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| E3396_RS23390 () | 65699..66070 | - | 372 | WP_100215268.1 | DUF1311 domain-containing protein | - |
| E3396_RS23395 () | 66858..67580 | - | 723 | WP_000742239.1 | LuxR C-terminal-related transcriptional regulator | - |
| E3396_RS23400 () | 67779..68831 | - | 1053 | WP_020833588.1 | Ig-like domain-containing protein | - |
| E3396_RS23405 () | 68843..71590 | - | 2748 | WP_023193067.1 | inverse autotransporter beta domain-containing protein | - |
| E3396_RS23410 () | 72284..72835 | + | 552 | WP_020833590.1 | hypothetical protein | - |
| E3396_RS23415 () | 72915..74114 | - | 1200 | WP_020833591.1 | IS256 family transposase | - |
| E3396_RS23420 () | 74490..75197 | + | 708 | WP_020833592.1 | molecular chaperone | - |
| E3396_RS23425 () | 75217..77643 | + | 2427 | WP_000471149.1 | fimbrial biogenesis outer membrane usher protein | - |
| E3396_RS23430 () | 77800..77947 | - | 148 | Protein_81 | transposase | - |
| E3396_RS23440 () | 79166..79411 | + | 246 | WP_131535392.1 | hypothetical protein | - |
| E3396_RS23445 () | 79558..79728 | + | 171 | Protein_83 | transposase | - |
| E3396_RS24205 () | 79716..80021 | + | 306 | WP_023193066.1 | hypothetical protein | - |
| E3396_RS24210 () | 80386..80844 | + | 459 | WP_086790286.1 | LysR family transcriptional regulator | - |
| E3396_RS23455 () | 80934..81419 | + | 486 | Protein_86 | transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|