MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 81911 bp
Accession: NZ_CP039472 Location: 1..81911 Organism: Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000970 Replicon: plasmid pCFSAN000970
Accession: NZ_CP039472 Location: 1..81911 Organism: Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000970 Replicon: plasmid pCFSAN000970
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E3397_RS23020 () | 1..405 | + | 405 | WP_020833565.1 | hypothetical protein | - |
| E3397_RS23025 () | 462..809 | + | 348 | WP_000550116.1 | hypothetical protein | - |
| E3397_RS23030 () | 904..1050 | + | 147 | WP_001159046.1 | hypothetical protein | - |
| E3397_RS23035 () | 1097..1921 | + | 825 | WP_020833564.1 | N-6 DNA methylase | - |
| E3397_RS23040 () | 2568..3098 | + | 531 | WP_000556935.1 | antirestriction protein | - |
| E3397_RS23045 () | 3109..3564 | - | 456 | WP_020833563.1 | transglycosylase SLT domain-containing protein | - |
| E3397_RS23050 () | 4033..4413 | + | 381 | WP_020833562.1 | relaxosome protein TraM | - |
| E3397_RS23055 () | 4710..5159 | + | 450 | WP_020833561.1 | helix-turn-helix domain-containing protein | - |
| E3397_RS23060 () | 5365..5598 | + | 234 | WP_000662610.1 | TraY domain-containing protein | - |
| E3397_RS23065 () | 5715..6074 | + | 360 | WP_001054221.1 | type IV conjugative transfer system pilin TraA | - |
| E3397_RS23070 () | 6076..6381 | + | 306 | WP_000398849.1 | type IV conjugative transfer system protein TraL | - |
| E3397_RS23075 () | 6401..6964 | + | 564 | WP_001535119.1 | type IV conjugative transfer system protein TraE | - |
| E3397_RS23080 () | 6954..7694 | + | 741 | WP_020833560.1 | type-F conjugative transfer system secretin TraK | - |
| E3397_RS23085 () | 7681..9042 | + | 1362 | WP_000024509.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| E3397_RS23090 () | 9153..9377 | + | 225 | WP_008455352.1 | TraR/DksA C4-type zinc finger protein | - |
| E3397_RS23095 () | 9381..9833 | + | 453 | WP_020833558.1 | hypothetical protein | - |
| E3397_RS23100 () | 9851..10465 | + | 615 | WP_020833557.1 | type IV conjugative transfer system lipoprotein TraV | - |
| E3397_RS23105 () | 10476..13067 | + | 2592 | WP_001808381.1 | type IV secretion system protein TraC | - |
| E3397_RS23110 () | 13064..13528 | + | 465 | WP_024143549.1 | type-F conjugative transfer system protein TrbI | - |
| E3397_RS23115 () | 13528..14163 | + | 636 | WP_000715590.1 | type-F conjugative transfer system protein TraW | - |
| E3397_RS23120 () | 14160..15155 | + | 996 | WP_004558357.1 | conjugal transfer pilus assembly protein TraU | - |
| E3397_RS23125 () | 15166..15534 | + | 369 | WP_020833555.1 | hypothetical protein | - |
| E3397_RS23130 () | 15531..16145 | + | 615 | WP_020833554.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| E3397_RS23135 () | 16142..17995 | + | 1854 | WP_020833553.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| E3397_RS23140 () | 17992..18771 | + | 780 | WP_004558353.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| E3397_RS23145 () | 18793..19404 | + | 612 | WP_020833552.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| E3397_RS23150 () | 19404..20765 | + | 1362 | WP_020833551.1 | F-type conjugal transfer protein TraH | - |
| E3397_RS23155 () | 20767..23664 | + | 2898 | WP_020833550.1 | conjugal transfer mating pair stabilization protein TraG | - |
| E3397_RS23160 () | 23676..24236 | + | 561 | WP_020833549.1 | hypothetical protein | - |
| E3397_RS23165 () | 24412..25149 | + | 738 | WP_020833548.1 | complement resistance protein TraT | - |
| E3397_RS23170 () | 25300..27534 | + | 2235 | WP_020833547.1 | type IV conjugative transfer system coupling protein TraD | - |
| E3397_RS23175 () | 27534..32837 | + | 5304 | WP_020833546.1 | conjugative transfer relaxase/helicase TraI | - |
| E3397_RS23180 () | 32856..33422 | + | 567 | WP_000493830.1 | DUF2726 domain-containing protein | - |
| E3397_RS23185 () | 33419..34150 | + | 732 | WP_020833545.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| E3397_RS23190 () | 34390..34860 | + | 471 | Protein_34 | phospholipase D family protein | - |
| E3397_RS23195 () | 35004..35270 | + | 267 | WP_001576653.1 | replication regulatory protein RepA | - |
| E3397_RS23200 () | 35520..35597 | + | 78 | WP_001541552.1 | RepA leader peptide Tap | - |
| E3397_RS23205 () | 35578..36459 | + | 882 | WP_023193063.1 | incFII family plasmid replication initiator RepA | - |
| E3397_RS23215 () | 37415..37684 | + | 270 | WP_000084547.1 | hypothetical protein | Antitoxin Detail |
| E3397_RS23220 () | 37681..37962 | + | 282 | WP_000970006.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin Detail |
| E3397_RS23225 () | 38114..38704 | - | 591 | WP_031607984.1 | plasmid pRiA4b ORF-3 family protein | - |
| E3397_RS23230 () | 39950..40459 | + | 510 | WP_131535394.1 | hypothetical protein | - |
| E3397_RS23235 () | 40768..41343 | + | 576 | WP_136537660.1 | hypothetical protein | - |
| E3397_RS23240 () | 41384..41737 | + | 354 | WP_157782941.1 | helix-turn-helix transcriptional regulator | - |
| E3397_RS23245 () | 41934..42635 | + | 702 | WP_023251326.1 | transcriptional activator SprB | - |
| E3397_RS23250 () | 42816..43208 | - | 393 | Protein_45 | transposase family protein | - |
| E3397_RS23255 () | 43224..44540 | - | 1317 | WP_136537661.1 | hypothetical protein | - |
| E3397_RS23260 () | 45165..45650 | - | 486 | Protein_47 | transposase | - |
| E3397_RS23555 () | 45740..46198 | - | 459 | WP_086790286.1 | LysR family transcriptional regulator | - |
| E3397_RS23560 () | 46563..46868 | - | 306 | WP_023193066.1 | hypothetical protein | - |
| E3397_RS23270 () | 46856..47026 | - | 171 | Protein_50 | transposase | - |
| E3397_RS23275 () | 47173..47418 | - | 246 | WP_131535392.1 | hypothetical protein | - |
| E3397_RS23285 () | 48637..48784 | + | 148 | Protein_52 | transposase | - |
| E3397_RS23290 () | 48941..51367 | - | 2427 | WP_000471149.1 | fimbrial biogenesis outer membrane usher protein | - |
| E3397_RS23295 () | 51387..52094 | - | 708 | WP_020833592.1 | molecular chaperone | - |
| E3397_RS23300 () | 52470..53669 | + | 1200 | WP_020833591.1 | IS256 family transposase | - |
| E3397_RS23305 () | 53749..54300 | - | 552 | WP_020833590.1 | hypothetical protein | - |
| E3397_RS23310 () | 54994..57741 | + | 2748 | WP_023193067.1 | inverse autotransporter beta domain-containing protein | - |
| E3397_RS23315 () | 57753..58805 | + | 1053 | WP_020833588.1 | Ig-like domain-containing protein | - |
| E3397_RS23320 () | 59004..59726 | + | 723 | WP_000742239.1 | LuxR C-terminal-related transcriptional regulator | - |
| E3397_RS23325 () | 60514..60885 | + | 372 | WP_100215268.1 | DUF1311 domain-containing protein | - |
| E3397_RS23330 () | 61705..61923 | + | 219 | WP_000813642.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| E3397_RS23335 () | 61925..62230 | + | 306 | WP_020833585.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| E3397_RS23340 () | 62539..63321 | + | 783 | WP_020833584.1 | site-specific integrase | - |
| E3397_RS23345 () | 63472..64413 | - | 942 | WP_000728920.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| E3397_RS23350 () | 65044..65298 | + | 255 | WP_001749329.1 | hypothetical protein | - |
| E3397_RS23355 () | 65987..67192 | + | 1206 | WP_000427674.1 | AAA family ATPase | - |
| E3397_RS23360 () | 67192..68166 | + | 975 | WP_020833582.1 | ParB/RepB/Spo0J family partition protein | - |
| E3397_RS23365 () | 68248..69522 | - | 1275 | WP_020833581.1 | Y-family DNA polymerase | - |
| E3397_RS23370 () | 69522..69945 | - | 424 | Protein_69 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| E3397_RS23375 () | 70125..70796 | - | 672 | WP_020833580.1 | SOS response-associated peptidase family protein | - |
| E3397_RS23380 () | 71156..71833 | + | 678 | WP_020833579.1 | DNA methylase | - |
| E3397_RS23385 () | 71833..72054 | + | 222 | WP_020833578.1 | hypothetical protein | - |
| E3397_RS23390 () | 72065..72484 | + | 420 | WP_020833577.1 | DUF1380 domain-containing protein | - |
| E3397_RS23395 () | 72539..73318 | + | 780 | WP_020833576.1 | hypothetical protein | - |
| E3397_RS23400 () | 73724..74230 | + | 507 | WP_020833575.1 | antirestriction protein ArdA | - |
| E3397_RS23405 () | 74273..74464 | + | 192 | WP_020833574.1 | hypothetical protein | - |
| E3397_RS23410 () | 74657..74910 | + | 254 | Protein_77 | DNA polymerase III subunit theta | - |
| E3397_RS23415 () | 74945..75261 | + | 317 | Protein_78 | hypothetical protein | - |
| E3397_RS23565 () | 75402..75623 | - | 222 | WP_114053208.1 | hypothetical protein | - |
| E3397_RS23425 () | 75954..76508 | + | 555 | WP_020833571.1 | single-stranded DNA-binding protein | - |
| E3397_RS23430 () | 76561..76803 | + | 243 | WP_024143550.1 | DUF905 domain-containing protein | - |
| E3397_RS23435 () | 76874..78907 | + | 2034 | WP_020833569.1 | ParB/RepB/Spo0J family partition protein | - |
| E3397_RS23440 () | 78948..79382 | + | 435 | WP_015059789.1 | conjugation system SOS inhibitor PsiB | - |
| E3397_RS23445 () | 79379..80107 | + | 729 | WP_020833568.1 | plasmid SOS inhibition protein A | - |
| E3397_RS23450 () | 80104..80457 | + | 354 | WP_020833567.1 | hypothetical protein | - |
| E3397_RS23455 () | 80812..81186 | + | 375 | WP_020833566.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|