MGE detailed information
MGE type: Genomic_island MGE length: 18908 bp
Accession: NZ_CP039371 Location: 361213..380120 Organism: Pseudomonas putida strain 1290 Replicon: chromosome
Accession: NZ_CP039371 Location: 361213..380120 Organism: Pseudomonas putida strain 1290 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E6B08_RS01685 () | 357394..358113 | - | 720 | WP_136912503.1 | response regulator transcription factor | - |
| E6B08_RS01690 () | 358254..360551 | + | 2298 | WP_136912504.1 | TonB-dependent siderophore receptor | - |
| E6B08_RS01695 () | 360600..361133 | - | 534 | WP_136917313.1 | hypothetical protein | - |
| E6B08_RS01700 () | 361213..361794 | - | 582 | WP_136912505.1 | hypothetical protein | - |
| E6B08_RS01705 () | 361900..362106 | - | 207 | WP_136912506.1 | DUF3079 domain-containing protein | - |
| E6B08_RS01710 () | 362242..362548 | + | 307 | Protein_321 | GTP 3',8-cyclase MoaA | - |
| E6B08_RS01715 () | 362591..362803 | - | 213 | WP_136912507.1 | hypothetical protein | - |
| E6B08_RS01720 () | 363758..364591 | + | 834 | WP_136912508.1 | TIGR04255 family protein | - |
| E6B08_RS01725 () | 364595..365275 | + | 681 | WP_136912509.1 | Cro/Cl family transcriptional regulator | - |
| E6B08_RS01730 () | 365287..366131 | + | 845 | Protein_325 | hypothetical protein | - |
| E6B08_RS01740 () | 366953..367228 | - | 276 | WP_136912510.1 | hypothetical protein | - |
| E6B08_RS01745 () | 367225..368205 | - | 981 | WP_136912511.1 | Beta-barrel assembly-enhancing protease ; Integrase | Integrase |
| E6B08_RS01755 () | 369136..369399 | - | 264 | Protein_328 | integrase | - |
| E6B08_RS01760 () | 369611..369961 | + | 351 | WP_136912512.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| E6B08_RS01765 () | 369958..370281 | - | 324 | WP_136912513.1 | helix-turn-helix domain-containing protein | - |
| E6B08_RS01775 () | 370738..370986 | - | 249 | WP_136912514.1 | hypothetical protein | - |
| E6B08_RS01780 () | 371515..371796 | + | 282 | WP_136912515.1 | hypothetical protein | - |
| E6B08_RS01785 () | 371789..372061 | + | 273 | WP_136912516.1 | DUF3077 domain-containing protein | - |
| E6B08_RS01790 () | 372368..373573 | - | 1206 | WP_136912517.1 | methyltransferase | - |
| E6B08_RS01795 () | 373717..374406 | - | 690 | WP_136912518.1 | ABC transporter permease | - |
| E6B08_RS01800 () | 374403..375098 | - | 696 | WP_136912519.1 | ABC transporter permease | - |
| E6B08_RS01805 () | 375153..375908 | - | 756 | WP_136912520.1 | ABC transporter substrate-binding protein | - |
| E6B08_RS01810 () | 375920..376693 | - | 774 | WP_136912521.1 | hypothetical protein | VF |
| E6B08_RS01820 () | 377312..378697 | + | 1386 | WP_136917314.1 | GABA permease | - |
| E6B08_RS01825 () | 378897..379340 | - | 444 | WP_136912522.1 | hypothetical protein | - |
| E6B08_RS01830 () | 379515..379805 | + | 291 | WP_136912523.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| E6B08_RS01835 () | 379815..380120 | + | 306 | WP_136912524.1 | putative addiction module antidote protein | Antitoxin Detail |
| E6B08_RS01845 () | 380399..380671 | - | 273 | WP_133327505.1 | oxidative damage protection protein | - |
| E6B08_RS01850 () | 380668..381735 | - | 1068 | WP_136912525.1 | A/G-specific adenine glycosylase | - |
| E6B08_RS01855 () | 381732..383963 | - | 2232 | WP_136912526.1 | AsmA family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|