MGE detailed information
MGE type: Mobilizable plasmid MGE length: 125137 bp
Accession: NZ_CP039328 Location: 1..125137 Organism: Citrobacter portucalensis strain Effluent_1 Replicon: plasmid unnamed1
Accession: NZ_CP039328 Location: 1..125137 Organism: Citrobacter portucalensis strain Effluent_1 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E7703_RS24585 () | 456..1322 | + | 867 | WP_004118283.1 | replication initiation protein | - |
| E7703_RS24590 () | 1679..1948 | - | 270 | WP_000339857.1 | hypothetical protein | - |
| E7703_RS24595 () | 2363..3568 | + | 1206 | WP_000368714.1 | AAA family ATPase | - |
| E7703_RS24600 () | 3568..4542 | + | 975 | WP_000064120.1 | ParB/RepB/Spo0J family partition protein | - |
| E7703_RS24605 () | 4624..5895 | - | 1272 | WP_004118291.1 | Y-family DNA polymerase | - |
| E7703_RS24610 () | 5895..6326 | - | 432 | WP_000776034.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| E7703_RS24620 () | 6732..8168 | + | 1437 | WP_167493800.1 | group II intron reverse transcriptase/maturase | - |
| E7703_RS24625 () | 8371..9068 | + | 698 | Protein_7 | IS1 family transposase IS1X3 | Transposase |
| E7703_RS24630 () | 9078..9386 | + | 309 | Protein_8 | replication initiation protein | - |
| E7703_RS24635 () | 10493..11461 | + | 969 | WP_020956880.1 | IS5 family transposase IS903B | Transposase |
| E7703_RS24645 () | 11601..11987 | - | 387 | WP_001039464.1 | hypothetical protein | - |
| E7703_RS24650 () | 12568..13536 | + | 969 | WP_167493801.1 | IS5 family transposase IS903B | Transposase |
| E7703_RS24655 () | 13594..13677 | - | 84 | Protein_12 | SOS response-associated peptidase | - |
| E7703_RS24670 () | 14404..15372 | - | 969 | WP_072202995.1 | IS5 family transposase IS903B | Transposase |
| E7703_RS24675 () | 15504..16208 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| E7703_RS24680 () | 16260..16772 | + | 513 | Protein_15 | ATP-binding protein | - |
| E7703_RS24685 () | 17051..18067 | + | 1017 | WP_136392542.1 | IS5 family transposase ISKpn26 | Transposase |
| E7703_RS24690 () | 18555..19721 | - | 1167 | WP_136392543.1 | Alcohol dehydrogenase 2 | VF |
| E7703_RS24695 () | 20144..21085 | - | 942 | WP_044351353.1 | pyridoxal-phosphate dependent enzyme | - |
| E7703_RS24700 () | 21082..21405 | - | 324 | WP_112974666.1 | succinylglutamate desuccinylase/aspartoacylase family protein | - |
| E7703_RS24705 () | 21450..22430 | + | 981 | WP_016236480.1 | IS5 family transposase ISKpn26 | Transposase |
| E7703_RS24710 () | 22710..23174 | - | 465 | WP_042998085.1 | isoprenylcysteine carboxylmethyltransferase family protein | - |
| E7703_RS24715 () | 23420..25078 | - | 1659 | WP_000706606.1 | FAD-dependent oxidoreductase | - |
| E7703_RS24720 () | 25240..25590 | + | 351 | WP_000928911.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| E7703_RS24725 () | 25895..26371 | - | 477 | WP_000043177.1 | hypothetical protein | VF |
| E7703_RS24730 () | 26486..26923 | - | 438 | WP_016241611.1 | PaaI family thioesterase | - |
| E7703_RS24735 () | 27084..27545 | - | 462 | WP_000626969.1 | hypothetical protein | - |
| E7703_RS24740 () | 27520..27840 | - | 321 | WP_001137910.1 | DUF134 domain-containing protein | - |
| E7703_RS24745 () | 28300..29304 | - | 1005 | WP_000427614.1 | IS110 family transposase IS5075 | Transposase |
| E7703_RS24750 () | 29383..30603 | - | 1221 | WP_016236505.1 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| E7703_RS24755 () | 30606..31163 | - | 558 | WP_016236504.1 | Tn3 family transposase TnpR_TnAs2 | Transposase |
| E7703_RS24760 () | 31293..32780 | - | 1488 | WP_011784757.1 | Multidrug/solvent efflux pump outer membrane protein MepC | VF |
| E7703_RS24765 () | 32767..33240 | - | 474 | WP_003056106.1 | cytochrome c | - |
| E7703_RS24770 () | 33269..33979 | - | 711 | WP_004393997.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| E7703_RS24775 () | 33981..35186 | - | 1206 | WP_136392340.1 | ABC transporter permease | - |
| E7703_RS24780 () | 35183..36334 | - | 1152 | WP_022652304.1 | efflux RND transporter periplasmic adaptor subunit | - |
| E7703_RS24785 () | 36331..36939 | - | 609 | WP_004393990.1 | TetR/AcrR family transcriptional regulator | - |
| E7703_RS24790 () | 37127..38131 | + | 1005 | WP_000427614.1 | IS110 family transposase IS5075 | Transposase |
| E7703_RS24795 () | 38509..38823 | - | 315 | WP_000091613.1 | hypothetical protein | - |
| E7703_RS24800 () | 39078..39434 | - | 357 | WP_000215515.1 | cupin domain-containing protein | - |
| E7703_RS24805 () | 39424..39825 | - | 402 | WP_001293886.1 | DUF86 domain-containing protein | - |
| E7703_RS24810 () | 39822..40112 | - | 291 | WP_001247892.1 | nucleotidyltransferase | - |
| E7703_RS24815 () | 40187..43153 | + | 2967 | WP_003100881.1 | Tn3 family transposase TnpA_ISPa38 | Transposase |
| E7703_RS24820 () | 43232..44236 | + | 1005 | WP_000427614.1 | IS110 family transposase IS5075 | Transposase |
| E7703_RS24825 () | 44513..45154 | + | 642 | Protein_44 | IS256 family transposase ISEic2 | Transposase |
| E7703_RS24830 () | 45191..45493 | + | 303 | Protein_45 | IS21 family transposase ISSen3 | Transposase |
| E7703_RS24835 () | 45490..46272 | + | 783 | WP_032415729.1 | IS21 family transposase ISSen3 | Transposase |
| E7703_RS24840 () | 46323..46976 | - | 654 | Protein_47 | IS110 family transposase ISSm1 | Transposase |
| E7703_RS24845 () | 47455..48105 | - | 651 | WP_004181705.1 | GntR family transcriptional regulator | - |
| E7703_RS24850 () | 48445..49689 | + | 1245 | WP_004181707.1 | divalent metal cation transporter | - |
| E7703_RS24855 () | 49698..50477 | + | 780 | WP_040120125.1 | LamB/YcsF family protein | - |
| E7703_RS24860 () | 50467..51273 | + | 807 | WP_004187003.1 | putative hydro-lyase | - |
| E7703_RS24865 () | 51286..52869 | + | 1584 | WP_004181711.1 | urea amidolyase family protein | - |
| E7703_RS24870 () | 52869..54614 | + | 1746 | WP_004187005.1 | ATP-grasp domain-containing protein | - |
| E7703_RS24875 () | 55154..55851 | - | 698 | Protein_54 | IS1 family transposase IS1R | Transposase |
| E7703_RS24880 () | 56202..56702 | + | 501 | WP_001752509.1 | non-heme ferritin-like protein | - |
| E7703_RS24885 () | 57019..57369 | - | 351 | Protein_56 | IS5 family transposase ISKpn26 | Transposase |
| E7703_RS24890 () | 57519..57887 | + | 369 | WP_032677090.1 | hypothetical protein | - |
| E7703_RS24900 () | 58578..60296 | - | 1719 | WP_117143033.1 | hybrid sensor histidine kinase/response regulator | - |
| E7703_RS24905 () | 60293..60781 | - | 489 | WP_000238872.1 | molybdopterin-dependent oxidoreductase | - |
| E7703_RS24910 () | 60774..61757 | - | 984 | WP_039267228.1 | hypothetical protein | - |
| E7703_RS24915 () | 61761..62675 | - | 915 | WP_077950058.1 | response regulator | - |
| E7703_RS24920 () | 62989..63297 | + | 309 | WP_000062770.1 | hypothetical protein | - |
| E7703_RS24925 () | 63290..63505 | + | 216 | WP_001112907.1 | hypothetical protein | - |
| E7703_RS24930 () | 63508..64170 | + | 663 | WP_000958205.1 | Type IV secretion system protein virB1 | VF |
| E7703_RS24935 () | 64181..64480 | + | 300 | WP_000175462.1 | TrbC/VirB2 family protein | - |
| E7703_RS24940 () | 64490..67240 | + | 2751 | WP_136392544.1 | Type IV secretion system protein virB4 | VF |
| E7703_RS24945 () | 67259..67975 | + | 717 | WP_000770034.1 | type IV secretion system protein | - |
| E7703_RS24950 () | 67987..68271 | + | 285 | WP_000769859.1 | EexN family lipoprotein | - |
| E7703_RS24955 () | 68289..69296 | + | 1008 | WP_000014166.1 | type IV secretion system protein | - |
| E7703_RS25875 () | 69373..69513 | + | 141 | WP_000873539.1 | hypothetical protein | - |
| E7703_RS24960 () | 69506..70192 | + | 687 | WP_001293055.1 | type IV secretion system protein | - |
| E7703_RS24965 () | 70185..71078 | + | 894 | WP_001045307.1 | P-type conjugative transfer protein VirB9 | - |
| E7703_RS24970 () | 71075..72271 | + | 1197 | WP_101850401.1 | Type IV secretion system protein virB10 | VF |
| E7703_RS24975 () | 72275..73324 | + | 1050 | WP_000342114.1 | Type IV secretion system protein VirB11 | VF |
| E7703_RS24980 () | 73311..73712 | + | 402 | WP_001776111.1 | hypothetical protein | - |
| E7703_RS24985 () | 73803..74120 | + | 318 | WP_000683352.1 | hypothetical protein | - |
| E7703_RS24990 () | 74147..74482 | + | 336 | WP_001776113.1 | hypothetical protein | - |
| E7703_RS24995 () | 74458..74766 | + | 309 | WP_000212005.1 | hypothetical protein | - |
| E7703_RS25000 () | 74763..76964 | + | 2202 | WP_023281073.1 | type IA DNA topoisomerase | - |
| E7703_RS25005 () | 76961..77353 | + | 393 | WP_001079960.1 | H-NS histone family protein | - |
| E7703_RS25010 () | 78062..79969 | + | 1908 | WP_023281074.1 | TraM recognition domain-containing protein | - |
| E7703_RS25015 () | 79984..80730 | + | 747 | WP_000909125.1 | hypothetical protein | - |
| E7703_RS25020 () | 80723..81250 | + | 528 | WP_001232861.1 | Phospholipase D | VF |
| E7703_RS25025 () | 81282..81713 | - | 432 | WP_032637342.1 | hypothetical protein | - |
| E7703_RS25880 () | 81845..82021 | - | 177 | WP_013438824.1 | hypothetical protein | - |
| E7703_RS25030 () | 82193..83158 | - | 966 | WP_032637340.1 | DUF1738 domain-containing protein | - |
| E7703_RS25035 () | 83607..83846 | + | 240 | WP_032637398.1 | hypothetical protein | - |
| E7703_RS25040 () | 83848..84231 | + | 384 | WP_032637338.1 | sOS mutagenesis and repair protein UmuD | - |
| E7703_RS25885 () | 84818..85261 | + | 444 | WP_164881506.1 | hypothetical protein | - |
| E7703_RS25050 () | 85266..85760 | + | 495 | WP_032637331.1 | hypothetical protein | - |
| E7703_RS25055 () | 86629..87327 | + | 699 | WP_032637397.1 | ParA family protein | - |
| E7703_RS25060 () | 87380..87673 | + | 294 | WP_032637329.1 | hypothetical protein | - |
| E7703_RS25065 () | 87795..88418 | + | 624 | Protein_93 | IS5 family transposase ISKpn26 | Transposase |
| E7703_RS25070 () | 88452..91457 | - | 3006 | WP_136392545.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| E7703_RS25075 () | 91621..92169 | + | 549 | WP_025760443.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| E7703_RS25080 () | 92272..94215 | + | 1944 | WP_032490861.1 | site-specific DNA-methyltransferase | - |
| E7703_RS25085 () | 94208..96583 | + | 2376 | WP_050296621.1 | DEAD/DEAH box helicase family protein | - |
| E7703_RS25090 () | 96908..97168 | + | 261 | WP_001567381.1 | DUF1471 domain-containing protein | - |
| E7703_RS25095 () | 97199..97705 | + | 507 | WP_001567380.1 | DUF417 family protein | - |
| E7703_RS25890 () | 97779..97916 | + | 138 | WP_021243014.1 | hypothetical protein | - |
| E7703_RS25100 () | 97940..98401 | + | 462 | WP_021243015.1 | Peptide methionine sulfoxide reductase MsrB | VF |
| E7703_RS25105 () | 98391..98885 | + | 495 | WP_021243016.1 | Peptide methionine sulfoxide reductase MsrA 3 | VF |
| E7703_RS25110 () | 99605..99886 | + | 282 | WP_021243017.1 | hypothetical protein | - |
| E7703_RS25115 () | 100024..100287 | + | 264 | WP_000072676.1 | hypothetical protein | - |
| E7703_RS25120 () | 100277..100576 | + | 300 | WP_021243018.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| E7703_RS25125 () | 100638..101003 | - | 366 | WP_021243019.1 | hypothetical protein | - |
| E7703_RS25130 () | 101072..101251 | + | 180 | WP_021243020.1 | Rop family plasmid primer RNA-binding protein | - |
| E7703_RS25135 () | 101282..101545 | - | 264 | WP_021243021.1 | hypothetical protein | - |
| E7703_RS25140 () | 101574..101771 | - | 198 | Protein_109 | hypothetical protein | - |
| E7703_RS25145 () | 102049..103053 | - | 1005 | WP_136392546.1 | IS110 family transposase IS4321 | Transposase |
| E7703_RS25150 () | 103138..103299 | - | 162 | WP_107835450.1 | Tn3 family transposase | - |
| E7703_RS25155 () | 103493..104245 | - | 753 | WP_004729622.1 | alpha/beta hydrolase | - |
| E7703_RS25160 () | 104486..105355 | + | 870 | WP_001567390.1 | DMT family transporter | - |
| E7703_RS25165 () | 105489..106712 | + | 1224 | WP_023287190.1 | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | - |
| E7703_RS25170 () | 106898..107671 | - | 774 | WP_004729618.1 | SDR family oxidoreductase | - |
| E7703_RS25175 () | 107737..108438 | - | 702 | WP_001194072.1 | DsbA family oxidoreductase | - |
| E7703_RS25180 () | 108504..109610 | - | 1107 | Protein_117 | alkene reductase | - |
| E7703_RS25185 () | 109824..110153 | + | 330 | WP_021242987.1 | thioredoxin family protein | - |
| E7703_RS25190 () | 110183..110521 | - | 339 | WP_021242988.1 | carboxymuconolactone decarboxylase family protein | - |
| E7703_RS25195 () | 110526..111107 | - | 582 | WP_020277920.1 | HTH-type transcriptional repressor NemR | VF |
| E7703_RS25200 () | 111249..111806 | - | 558 | WP_000108589.1 | OsmC family protein | - |
| E7703_RS25205 () | 111991..112575 | - | 585 | WP_012695450.1 | Tn3 family transposase TnpR_ISYps3 | Transposase |
| E7703_RS25210 () | 112735..115719 | + | 2985 | WP_032666414.1 | Tn3 family transposase TnpA_ISSba14 | Transposase |
| E7703_RS25215 () | 115798..116802 | + | 1005 | WP_136392546.1 | IS110 family transposase IS4321 | Transposase |
| E7703_RS25220 () | 117192..117596 | + | 405 | WP_071846040.1 | TIR domain-containing protein | - |
| E7703_RS25225 () | 117635..118498 | - | 864 | WP_136392547.1 | DUF4231 domain-containing protein | - |
| E7703_RS25230 () | 118515..119072 | - | 558 | WP_042005136.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| E7703_RS25235 () | 119233..122244 | + | 3012 | WP_136392548.1 | Tn3 family transposase ISEc63 | Transposase |
| E7703_RS25240 () | 122366..122584 | + | 219 | WP_023294775.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| E7703_RS25245 () | 122586..122891 | + | 306 | WP_016946795.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| E7703_RS25250 () | 123049..123555 | + | 507 | WP_023294776.1 | hypothetical protein | - |
| E7703_RS25255 () | 123734..124510 | + | 777 | WP_049245386.1 | site-specific integrase | - |
| E7703_RS25260 () | 124568..124825 | - | 258 | WP_000764642.1 | hypothetical protein | - |
| E7703_RS25895 () | 124954..125058 | - | 105 | WP_032409716.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|