MGE detailed information
MGE type: Prophage MGE length: 70255 bp
Accession: NZ_CP039298 Location: 1910401..1980655 Organism: Escherichia coli strain PigCaeca_1 Replicon: chromosome
Accession: NZ_CP039298 Location: 1910401..1980655 Organism: Escherichia coli strain PigCaeca_1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E7Z58_RS09450 () | 1905549..1906505 | + | 957 | WP_072805165.1 | molybdenum cofactor insertion chaperone PaoD | - |
| E7Z58_RS09455 () | 1906556..1906893 | + | 338 | Protein_1823 | LysR family transcriptional regulator | - |
| E7Z58_RS09460 () | 1907459..1908598 | + | 1140 | WP_000784327.1 | hypothetical protein | - |
| E7Z58_RS09465 () | 1909152..1910366 | + | 1215 | WP_072161528.1 | type II restriction endonuclease | - |
| E7Z58_RS09470 () | 1910401..1911804 | - | 1404 | WP_175267657.1 | DNA cytosine methyltransferase | - |
| E7Z58_RS09475 () | 1912238..1913011 | + | 774 | WP_000355484.1 | hypothetical protein | - |
| E7Z58_RS09480 () | 1913072..1913626 | - | 555 | WP_094304449.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| E7Z58_RS09485 () | 1913656..1914174 | + | 519 | WP_136360484.1 | phage tail protein | - |
| E7Z58_RS09490 () | 1914174..1914776 | + | 603 | WP_094304453.1 | tail fiber assembly protein | - |
| E7Z58_RS09495 () | 1914748..1915191 | - | 444 | WP_001045290.1 | tail fiber assembly protein | - |
| E7Z58_RS09500 () | 1915196..1915876 | - | 681 | WP_136360440.1 | hypothetical protein | - |
| E7Z58_RS09505 () | 1915880..1916464 | - | 585 | WP_000383548.1 | YmfQ family protein | - |
| E7Z58_RS09510 () | 1916455..1917513 | - | 1059 | WP_094304457.1 | baseplate J/gp47 family protein | - |
| E7Z58_RS09515 () | 1917500..1917925 | - | 426 | WP_000424732.1 | phage GP46 family protein | - |
| E7Z58_RS09520 () | 1917925..1918473 | - | 549 | WP_001522208.1 | phage baseplate assembly protein V | - |
| E7Z58_RS09525 () | 1918473..1919552 | - | 1080 | WP_039004711.1 | baseplate protein | - |
| E7Z58_RS09530 () | 1919549..1920877 | - | 1329 | WP_021576726.1 | DNA circularization N-terminal domain-containing protein | - |
| E7Z58_RS09535 () | 1920931..1921608 | - | 678 | WP_077543277.1 | hypothetical protein | - |
| E7Z58_RS09540 () | 1921690..1923471 | - | 1782 | WP_094304460.1 | phage tail tape measure protein | - |
| E7Z58_RS09550 () | 1923613..1923882 | - | 270 | WP_000661051.1 | phage tail assembly protein | - |
| E7Z58_RS09555 () | 1923882..1924238 | - | 357 | WP_000090998.1 | phage tail tube protein | - |
| E7Z58_RS09560 () | 1924238..1925734 | - | 1497 | WP_094304463.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| E7Z58_RS09565 () | 1925718..1925888 | - | 171 | WP_000497751.1 | DUF2635 domain-containing protein | - |
| E7Z58_RS09570 () | 1925897..1926457 | - | 561 | WP_094304465.1 | hypothetical protein | - |
| E7Z58_RS09575 () | 1926454..1926960 | - | 507 | WP_000224835.1 | hypothetical protein | - |
| E7Z58_RS09580 () | 1926935..1927345 | - | 411 | WP_094304468.1 | phage head closure protein | - |
| E7Z58_RS09585 () | 1927342..1927665 | - | 324 | WP_000927711.1 | head-tail connector protein | - |
| E7Z58_RS09590 () | 1927668..1927868 | - | 201 | WP_094304471.1 | hypothetical protein | - |
| E7Z58_RS09595 () | 1927918..1929123 | - | 1206 | WP_000257491.1 | phage major capsid protein | - |
| E7Z58_RS09600 () | 1929138..1929788 | - | 651 | WP_001193631.1 | HK97 family phage prohead protease | - |
| E7Z58_RS09605 () | 1929766..1931007 | - | 1242 | WP_094304473.1 | phage portal protein | - |
| E7Z58_RS09610 () | 1931007..1931189 | - | 183 | WP_024233354.1 | hypothetical protein | - |
| E7Z58_RS09615 () | 1931201..1932697 | - | 1497 | WP_072011717.1 | terminase large subunit | - |
| E7Z58_RS09620 () | 1932931..1933425 | - | 495 | WP_136360441.1 | phage terminase small subunit P27 family | - |
| E7Z58_RS09625 () | 1933551..1933901 | - | 351 | WP_094304482.1 | HNH endonuclease | - |
| E7Z58_RS09630 () | 1933980..1934669 | - | 690 | WP_000984534.1 | hypothetical protein | - |
| E7Z58_RS09635 () | 1934718..1935179 | - | 462 | WP_000778471.1 | lysis protein | - |
| E7Z58_RS09640 () | 1935163..1935639 | - | 477 | WP_001197756.1 | glycoside hydrolase family protein | - |
| E7Z58_RS09645 () | 1935643..1935969 | - | 327 | WP_001120496.1 | phage holin, lambda family | - |
| E7Z58_RS09650 () | 1936236..1936982 | + | 747 | WP_001406331.1 | hypothetical protein | - |
| E7Z58_RS09655 () | 1937033..1937398 | - | 366 | WP_199777249.1 | antitermination protein Q | - |
| E7Z58_RS09660 () | 1937413..1938402 | - | 990 | WP_001360050.1 | DUF968 domain-containing protein | - |
| E7Z58_RS09665 () | 1938410..1939219 | - | 810 | WP_001061380.1 | KilA-N domain-containing protein | - |
| E7Z58_RS09670 () | 1939239..1939628 | - | 390 | WP_000767111.1 | RusA family crossover junction endodeoxyribonuclease | - |
| E7Z58_RS09675 () | 1939625..1939951 | - | 327 | WP_000210154.1 | LexA family transcriptional regulator | - |
| E7Z58_RS09680 () | 1939948..1940601 | - | 654 | WP_001305610.1 | phage N-6-adenine-methyltransferase | - |
| E7Z58_RS09685 () | 1940601..1941095 | - | 495 | WP_094304485.1 | PerC family transcriptional regulator | - |
| E7Z58_RS09690 () | 1941092..1942033 | - | 942 | WP_000104953.1 | helix-turn-helix domain-containing protein | - |
| E7Z58_RS09695 () | 1942023..1942202 | - | 180 | WP_001250269.1 | DUF4222 domain-containing protein | - |
| E7Z58_RS09700 () | 1942378..1942929 | - | 552 | WP_001434539.1 | hypothetical protein | - |
| E7Z58_RS09705 () | 1942967..1943167 | - | 201 | WP_000205494.1 | cell division protein | - |
| E7Z58_RS09710 () | 1943265..1943891 | + | 627 | WP_000450735.1 | LexA family transcriptional regulator | - |
| E7Z58_RS09715 () | 1944139..1944345 | + | 207 | WP_000549625.1 | hypothetical protein | - |
| E7Z58_RS09720 () | 1944317..1944751 | - | 435 | WP_000016389.1 | hypothetical protein | - |
| E7Z58_RS09730 () | 1944895..1945205 | + | 311 | Protein_1876 | hypothetical protein | - |
| E7Z58_RS09735 () | 1945220..1945582 | + | 363 | WP_000135682.1 | hypothetical protein | - |
| E7Z58_RS09740 () | 1945648..1946472 | + | 825 | WP_000081287.1 | DUF2303 family protein | - |
| E7Z58_RS09745 () | 1946600..1947136 | + | 537 | WP_000008200.1 | 5'-deoxynucleotidase | - |
| E7Z58_RS09750 () | 1947127..1947489 | + | 363 | WP_001242749.1 | phage protein | - |
| E7Z58_RS09755 () | 1947489..1947794 | + | 306 | WP_000206734.1 | hypothetical protein | - |
| E7Z58_RS09765 () | 1948021..1949184 | + | 1164 | Protein_1882 | Tyrosine recombinase XerD ; Integrase | Integrase |
| E7Z58_RS09775 () | 1949389..1950642 | - | 1254 | WP_000893278.1 | glutamate-5-semialdehyde dehydrogenase | - |
| E7Z58_RS09780 () | 1950654..1951757 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| E7Z58_RS09785 () | 1952045..1953100 | + | 1056 | WP_072804988.1 | phosphoporin PhoE | - |
| E7Z58_RS09790 () | 1953139..1953540 | - | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| E7Z58_RS09795 () | 1953598..1954842 | - | 1245 | WP_000189541.1 | esterase FrsA | - |
| - () | 1954258..1954338 | - | 81 | NuclAT_11 | - | - |
| - () | 1954258..1954338 | - | 81 | NuclAT_11 | - | - |
| - () | 1954258..1954338 | - | 81 | NuclAT_11 | - | - |
| - () | 1954258..1954338 | - | 81 | NuclAT_11 | - | - |
| E7Z58_RS09800 () | 1954934..1955392 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| E7Z58_RS09805 () | 1955653..1957110 | + | 1458 | WP_001293003.1 | cytosol nonspecific dipeptidase | - |
| E7Z58_RS09810 () | 1957167..1957688 | - | 522 | Protein_1890 | peptide chain release factor H | - |
| E7Z58_RS09815 () | 1957687..1957890 | - | 204 | Protein_1891 | RNA ligase RtcB family protein | - |
| E7Z58_RS09820 () | 1958136..1958588 | - | 453 | WP_001059847.1 | GNAT family N-acetyltransferase | - |
| E7Z58_RS09825 () | 1958598..1958996 | - | 399 | WP_001263493.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| E7Z58_RS09830 () | 1958999..1959292 | - | 294 | WP_000554757.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| E7Z58_RS09835 () | 1959344..1960399 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| E7Z58_RS09840 () | 1960470..1961255 | - | 786 | WP_000207564.1 | Chemotaxis protein LafU | VF |
| E7Z58_RS09845 () | 1961227..1962939 | + | 1713 | Protein_1897 | Flagellar biosynthesis protein FlhA | VF |
| E7Z58_RS09850 () | 1963163..1963660 | - | 498 | WP_000006255.1 | REP-associated tyrosine transposase RayT | - |
| E7Z58_RS09855 () | 1963836..1964609 | - | 774 | WP_001355630.1 | Murein DD-endopeptidase MepH | VF |
| E7Z58_RS09860 () | 1964795..1965055 | + | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | - |
| E7Z58_RS09865 () | 1965058..1965327 | + | 270 | Protein_1901 | type II toxin-antitoxin system YafQ family toxin | - |
| E7Z58_RS09870 () | 1965483..1966223 | + | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| E7Z58_RS09875 () | 1966194..1966961 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| E7Z58_RS09880 () | 1967167..1967745 | - | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| E7Z58_RS09885 () | 1967985..1970429 | + | 2445 | WP_000973083.1 | Acyl-coenzyme A dehydrogenase | VF |
| E7Z58_RS09890 () | 1970472..1970918 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| E7Z58_RS09895 () | 1971099..1971869 | + | 771 | WP_001118036.1 | 2-oxoglutaramate amidase | - |
| E7Z58_RS09900 () | 1971910..1972671 | - | 762 | Protein_1908 | ISAs1 family transposase ISEc1 | Transposase |
| E7Z58_RS09905 () | 1972729..1973426 | + | 698 | Protein_1909 | IS1 family transposase | - |
| E7Z58_RS09915 () | 1973824..1974555 | - | 732 | WP_001340895.1 | DNA polymerase III subunit epsilon | - |
| E7Z58_RS09920 () | 1974620..1975087 | + | 468 | WP_000917883.1 | ribonuclease HI | - |
| E7Z58_RS09925 () | 1975084..1975806 | - | 723 | WP_001326702.1 | class I SAM-dependent methyltransferase | - |
| E7Z58_RS09930 () | 1975840..1976595 | + | 756 | WP_001052715.1 | hydroxyacylglutathione hydrolase | - |
| E7Z58_RS09935 () | 1976667..1978025 | + | 1359 | WP_000644685.1 | Membrane-bound lytic murein transglycosylase D | VF |
| E7Z58_RS09940 () | 1978073..1978669 | - | 597 | Protein_1915 | methyltransferase domain-containing protein | - |
| E7Z58_RS09945 () | 1978700..1979500 | - | 801 | WP_001230983.1 | endonuclease/exonuclease/phosphatase family protein | - |
| E7Z58_RS09950 () | 1979741..1980655 | + | 915 | WP_000648572.1 | HTH-type transcriptional regulator DmlR | VF |
| E7Z58_RS09955 () | 1980652..1981455 | - | 804 | WP_000997010.1 | 2,5-didehydrogluconate reductase DkgB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|