MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 87848 bp
Accession: NZ_CP039293 Location: 5578776..5666623 Organism: Pseudomonas aeruginosa strain PABL048 Replicon: chromosome
Accession: NZ_CP039293 Location: 5578776..5666623 Organism: Pseudomonas aeruginosa strain PABL048 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DZ927_RS26795 () | 5574292..5578545 | + | 4254 | WP_019486076.1 | two-partner secretion system exoprotein TpsA4 | - |
| DZ927_RS26800 () | 5578913..5579779 | + | 867 | WP_003111785.1 | ParA family protein | - |
| DZ927_RS26805 () | 5579781..5580518 | + | 738 | WP_019486077.1 | hypothetical protein | - |
| DZ927_RS26810 () | 5580515..5581012 | + | 498 | WP_003111783.1 | hypothetical protein | - |
| DZ927_RS26815 () | 5581018..5581839 | + | 822 | WP_019486078.1 | hypothetical protein | - |
| DZ927_RS26820 () | 5581836..5582522 | + | 687 | WP_003122071.1 | hypothetical protein | - |
| DZ927_RS26825 () | 5582522..5583223 | + | 702 | WP_004347982.1 | DUF2786 domain-containing protein | - |
| DZ927_RS26830 () | 5583220..5583927 | + | 708 | WP_003122069.1 | HNH endonuclease | - |
| DZ927_RS26835 () | 5583911..5584129 | + | 219 | WP_003122068.1 | hypothetical protein | - |
| DZ927_RS26840 () | 5584126..5585469 | + | 1344 | WP_019486079.1 | replicative DNA helicase | - |
| DZ927_RS35730 () | 5585908..5586354 | - | 447 | WP_003117028.1 | hypothetical protein | - |
| DZ927_RS26850 () | 5586532..5586717 | + | 186 | WP_019486080.1 | hypothetical protein | - |
| DZ927_RS26855 () | 5586707..5587234 | + | 528 | WP_003141385.1 | hypothetical protein | - |
| DZ927_RS26860 () | 5587231..5587488 | + | 258 | WP_019486081.1 | hypothetical protein | - |
| DZ927_RS26865 () | 5587481..5587978 | + | 498 | WP_123796553.1 | hypothetical protein | - |
| DZ927_RS26870 () | 5587971..5588204 | + | 234 | WP_019486083.1 | hypothetical protein | - |
| DZ927_RS26875 () | 5588204..5589226 | + | 1023 | WP_023124916.1 | nucleoid-associated protein YejK | - |
| DZ927_RS26880 () | 5589223..5590113 | + | 891 | WP_003117034.1 | DNA adenine methylase | - |
| DZ927_RS26885 () | 5590134..5590403 | + | 270 | WP_003117035.1 | Arc family DNA-binding protein | - |
| DZ927_RS26890 () | 5590400..5592133 | + | 1734 | WP_019484534.1 | ParB family protein | - |
| DZ927_RS26895 () | 5592161..5592928 | + | 768 | WP_004352844.1 | DUF2857 domain-containing protein | - |
| DZ927_RS26900 () | 5592925..5594250 | + | 1326 | WP_019484535.1 | hypothetical protein | - |
| DZ927_RS26910 () | 5595504..5595701 | + | 198 | WP_019485319.1 | hypothetical protein | - |
| DZ927_RS26915 () | 5595858..5596586 | + | 729 | WP_016851605.1 | TIGR03761 family integrating conjugative element protein | - |
| DZ927_RS26920 () | 5596592..5597140 | + | 549 | WP_016851606.1 | DUF3158 family protein | - |
| DZ927_RS26925 () | 5597188..5598018 | + | 831 | WP_012076855.1 | phage regulatory protein | - |
| DZ927_RS26930 () | 5598048..5598506 | + | 459 | WP_016851607.1 | single-stranded DNA-binding protein | - |
| DZ927_RS26935 () | 5598612..5598806 | + | 195 | WP_016851608.1 | hypothetical protein | - |
| DZ927_RS26940 () | 5599051..5599218 | + | 168 | WP_170323396.1 | CrpP family protein | - |
| DZ927_RS26945 () | 5599334..5601253 | + | 1920 | WP_023101571.1 | type I DNA topoisomerase | - |
| DZ927_RS26950 () | 5601560..5601769 | + | 210 | WP_003105733.1 | cold-shock protein | - |
| DZ927_RS26955 () | 5601991..5603880 | + | 1890 | WP_016851610.1 | hypothetical protein | - |
| DZ927_RS26960 () | 5603877..5605853 | + | 1977 | WP_016851611.1 | DEAD/DEAH box helicase | - |
| DZ927_RS26965 () | 5605994..5606338 | + | 345 | WP_016851612.1 | hypothetical protein | - |
| DZ927_RS26970 () | 5606409..5606699 | - | 291 | WP_003448662.1 | putative addiction module antidote protein | Antitoxin Detail |
| DZ927_RS26975 () | 5606696..5606995 | - | 300 | WP_003120987.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| DZ927_RS26980 () | 5607197..5608321 | + | 1125 | WP_012076859.1 | hypothetical protein | VF |
| DZ927_RS26985 () | 5608321..5610030 | + | 1710 | WP_012076860.1 | hypothetical protein | VF |
| DZ927_RS26990 () | 5610034..5611359 | + | 1326 | WP_003099758.1 | type 4b pilus protein PilO2 | - |
| DZ927_RS26995 () | 5611349..5611882 | + | 534 | WP_003099760.1 | type IV pilus biogenesis protein PilP | - |
| DZ927_RS27000 () | 5611891..5613471 | + | 1581 | WP_003099761.1 | hypothetical protein | VF |
| DZ927_RS27005 () | 5613471..5614550 | + | 1080 | WP_003099764.1 | hypothetical protein | VF |
| DZ927_RS27010 () | 5614572..5615102 | + | 531 | WP_003099765.1 | hypothetical protein | VF |
| DZ927_RS27015 () | 5615099..5616055 | + | 957 | WP_003117051.1 | hypothetical protein | VF |
| DZ927_RS27020 () | 5616048..5617427 | + | 1380 | WP_003117053.1 | hypothetical protein | VF |
| DZ927_RS27025 () | 5617445..5617882 | + | 438 | WP_003117054.1 | hypothetical protein | VF |
| DZ927_RS35735 () | 5618945..5619190 | + | 246 | WP_003117055.1 | hypothetical protein | - |
| DZ927_RS35740 () | 5619265..5619438 | + | 174 | WP_003158172.1 | hypothetical protein | - |
| DZ927_RS27040 () | 5619899..5620378 | + | 480 | WP_003117056.1 | DUF3577 domain-containing protein | - |
| DZ927_RS35745 () | 5620516..5620674 | + | 159 | WP_003109368.1 | hypothetical protein | - |
| DZ927_RS27045 () | 5620748..5620945 | + | 198 | WP_003117057.1 | hypothetical protein | - |
| DZ927_RS27055 () | 5621430..5622137 | + | 708 | WP_003117058.1 | hypothetical protein | - |
| DZ927_RS27060 () | 5622373..5622723 | + | 351 | WP_003099791.1 | hypothetical protein | - |
| DZ927_RS27065 () | 5622780..5623412 | + | 633 | WP_003158170.1 | DUF3275 family protein | - |
| DZ927_RS27070 () | 5623409..5623684 | + | 276 | WP_003117060.1 | hypothetical protein | - |
| DZ927_RS27075 () | 5623754..5624116 | + | 363 | WP_003117061.1 | hypothetical protein | - |
| DZ927_RS27080 () | 5624184..5624438 | + | 255 | WP_003117062.1 | hypothetical protein | - |
| DZ927_RS27085 () | 5624531..5625136 | + | 606 | WP_003158169.1 | hypothetical protein | - |
| DZ927_RS27090 () | 5625166..5626611 | + | 1446 | WP_003158168.1 | class I SAM-dependent methyltransferase | - |
| DZ927_RS27095 () | 5626579..5626911 | - | 333 | WP_003158167.1 | hypothetical protein | - |
| DZ927_RS27100 () | 5626904..5627334 | - | 431 | Protein_5238 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| DZ927_RS27105 () | 5627439..5628122 | + | 684 | WP_003158165.1 | SOS response-associated peptidase family protein | - |
| DZ927_RS27120 () | 5628986..5629360 | + | 375 | WP_003158163.1 | hypothetical protein | - |
| DZ927_RS35750 () | 5629385..5629969 | + | 585 | WP_044265603.1 | hypothetical protein | - |
| DZ927_RS27130 () | 5629954..5630550 | + | 597 | WP_003158161.1 | VWA domain-containing protein | - |
| DZ927_RS27140 () | 5631102..5631494 | + | 393 | WP_003158160.1 | hypothetical protein | - |
| DZ927_RS27145 () | 5631513..5631836 | + | 324 | WP_003158159.1 | hypothetical protein | - |
| DZ927_RS27150 () | 5632663..5632935 | - | 273 | WP_003125312.1 | hypothetical protein | - |
| DZ927_RS27155 () | 5633153..5633851 | + | 699 | WP_023094353.1 | hypothetical protein | - |
| DZ927_RS27160 () | 5633862..5634617 | + | 756 | WP_003099814.1 | TIGR03759 family integrating conjugative element protein | - |
| DZ927_RS27165 () | 5634602..5635183 | + | 582 | WP_003117072.1 | hypothetical protein | VF |
| DZ927_RS27170 () | 5635180..5635680 | + | 501 | WP_003099819.1 | integrating conjugative element protein | - |
| DZ927_RS27175 () | 5635752..5635958 | + | 207 | WP_073689213.1 | hypothetical protein | - |
| DZ927_RS27180 () | 5635962..5638193 | + | 2232 | WP_003099821.1 | type IV conjugative transfer system coupling protein TraD | - |
| DZ927_RS27185 () | 5638193..5638939 | + | 747 | WP_003099824.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| DZ927_RS27190 () | 5638957..5639448 | + | 492 | WP_003099826.1 | hypothetical protein | - |
| DZ927_RS27195 () | 5639690..5641171 | + | 1482 | WP_003117073.1 | UvrD-helicase domain-containing protein | - |
| DZ927_RS35755 () | 5641303..5642412 | + | 1110 | WP_003121016.1 | hypothetical protein | - |
| DZ927_RS27205 () | 5642458..5642769 | - | 312 | WP_003117074.1 | DUF2845 domain-containing protein | - |
| DZ927_RS27210 () | 5642942..5643241 | + | 300 | WP_003117075.1 | hypothetical protein | - |
| DZ927_RS27215 () | 5643335..5643673 | + | 339 | WP_003158157.1 | RAQPRD family integrative conjugative element protein | - |
| DZ927_RS27220 () | 5643670..5643909 | + | 240 | WP_003121019.1 | TIGR03758 family integrating conjugative element protein | - |
| DZ927_RS27225 () | 5643927..5644283 | + | 357 | WP_003117077.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| DZ927_RS27230 () | 5644294..5644680 | + | 387 | WP_003117078.1 | TIGR03750 family conjugal transfer protein | - |
| DZ927_RS27235 () | 5644677..5645336 | + | 660 | WP_003117079.1 | TIGR03746 family integrating conjugative element protein | - |
| DZ927_RS27240 () | 5645333..5646217 | + | 885 | WP_019484428.1 | TIGR03749 family integrating conjugative element protein | - |
| DZ927_RS27245 () | 5646201..5647706 | + | 1506 | WP_019484427.1 | TIGR03752 family integrating conjugative element protein | - |
| DZ927_RS27250 () | 5647684..5648127 | + | 444 | WP_023083781.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| DZ927_RS27255 () | 5648127..5651069 | + | 2943 | WP_023083782.1 | conjugative transfer ATPase | - |
| DZ927_RS27260 () | 5651066..5651350 | + | 285 | WP_003086159.1 | hypothetical protein | - |
| DZ927_RS27265 () | 5651347..5652006 | + | 660 | WP_019484424.1 | DsbA family protein | - |
| DZ927_RS27270 () | 5652003..5652221 | - | 219 | WP_019484423.1 | hypothetical protein | - |
| DZ927_RS27275 () | 5653037..5653666 | - | 630 | WP_171902868.1 | hypothetical protein | - |
| DZ927_RS27285 () | 5654362..5654793 | + | 432 | WP_019484422.1 | TIGR03757 family integrating conjugative element protein | - |
| DZ927_RS27290 () | 5654793..5655731 | + | 939 | WP_019484421.1 | TIGR03756 family integrating conjugative element protein | - |
| DZ927_RS27295 () | 5655749..5657131 | + | 1383 | WP_023101466.1 | integrating conjugative element protein | - |
| DZ927_RS27300 () | 5657131..5657478 | + | 348 | WP_012076881.1 | hypothetical protein | - |
| DZ927_RS27305 () | 5657475..5658986 | + | 1512 | WP_019484419.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| DZ927_RS27310 () | 5659024..5659374 | - | 351 | WP_071535247.1 | hypothetical protein | - |
| DZ927_RS27315 () | 5659493..5659765 | + | 273 | WP_003111730.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| DZ927_RS27320 () | 5659769..5660122 | + | 354 | WP_003111729.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| DZ927_RS27325 () | 5660149..5661063 | - | 915 | WP_003119431.1 | hypothetical protein | - |
| DZ927_RS27330 () | 5661089..5661328 | - | 240 | WP_010792230.1 | hypothetical protein | - |
| DZ927_RS27340 () | 5662739..5662993 | + | 255 | WP_123906486.1 | hypothetical protein | - |
| DZ927_RS27345 () | 5663012..5664931 | + | 1920 | WP_023101468.1 | helicase/relaxase domain-containing protein | - |
| DZ927_RS27350 () | 5664928..5666208 | + | 1281 | WP_023101469.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| DZ927_RS27370 () | 5667061..5669625 | - | 2565 | WP_003094682.1 | ATP-dependent chaperone ClpB | - |
| DZ927_RS27375 () | 5669781..5670509 | - | 729 | WP_019486636.1 | peptidoglycan editing factor PgeF | - |
| DZ927_RS27380 () | 5670506..5671468 | - | 963 | WP_003094686.1 | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|