MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 50242 bp
Accession: NZ_CP039245 Location: 1..50242 Organism: Piscirickettsia salmonis strain MR5 Replicon: plasmid unnamed5
Accession: NZ_CP039245 Location: 1..50242 Organism: Piscirickettsia salmonis strain MR5 Replicon: plasmid unnamed5
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PsalMR5_RS23980 () | 1..1053 | + | 1053 | WP_051929651.1 | ParA family protein | - |
| PsalMR5_RS23985 () | 1057..1785 | + | 729 | WP_155081913.1 | hypothetical protein | - |
| PsalMR5_RS23990 () | 1853..2083 | + | 231 | WP_155081914.1 | hypothetical protein | - |
| PsalMR5_RS23995 () | 2177..2794 | - | 618 | WP_155081915.1 | hypothetical protein | - |
| PsalMR5_RS24000 () | 2988..3416 | - | 429 | WP_155081963.1 | hypothetical protein | - |
| PsalMR5_RS24005 () | 3416..3853 | - | 438 | WP_155081916.1 | hypothetical protein | - |
| PsalMR5_RS24010 () | 3853..4506 | - | 654 | WP_155081917.1 | DUF4376 domain-containing protein | - |
| PsalMR5_RS24015 () | 4516..5196 | - | 681 | WP_155081918.1 | hypothetical protein | - |
| PsalMR5_RS24020 () | 5355..5501 | - | 147 | WP_196215086.1 | hypothetical protein | - |
| PsalMR5_RS24025 () | 5467..5943 | - | 477 | WP_155081920.1 | hypothetical protein | - |
| PsalMR5_RS24030 () | 5943..6596 | - | 654 | WP_155081921.1 | hypothetical protein | - |
| PsalMR5_RS24035 () | 6662..7588 | + | 927 | WP_155081922.1 | IS630 family transposase ISFtu1 | Transposase |
| PsalMR5_RS24040 () | 7569..10187 | - | 2619 | WP_155081923.1 | host specificity protein J | - |
| PsalMR5_RS24045 () | 10184..10741 | - | 558 | WP_155081924.1 | tail assembly protein | - |
| PsalMR5_RS24050 () | 10802..11776 | - | 975 | WP_155066440.1 | IS30 family transposase ISPlu1 | Transposase |
| PsalMR5_RS24055 () | 12092..12904 | + | 813 | WP_155081925.1 | hypothetical protein | - |
| PsalMR5_RS24060 () | 12957..13721 | - | 765 | WP_155081926.1 | C40 family peptidase | - |
| PsalMR5_RS24065 () | 13672..14343 | - | 672 | WP_155081927.1 | phage minor tail protein L | - |
| PsalMR5_RS24070 () | 14340..14681 | - | 342 | WP_155081928.1 | phage tail protein | - |
| PsalMR5_RS24075 () | 14674..16752 | - | 2079 | WP_155081929.1 | phage tail tape measure protein | - |
| PsalMR5_RS24080 () | 16756..17019 | - | 264 | WP_155081930.1 | DUF4035 domain-containing protein | - |
| PsalMR5_RS24085 () | 17076..17399 | - | 324 | WP_155081931.1 | hypothetical protein | - |
| PsalMR5_RS24090 () | 17401..17823 | - | 423 | WP_155081964.1 | hypothetical protein | - |
| PsalMR5_RS25105 () | 17823..17969 | - | 147 | WP_196215087.1 | hypothetical protein | - |
| PsalMR5_RS24095 () | 18073..19047 | + | 975 | WP_155079445.1 | IS30 family transposase ISMae39 | Transposase |
| PsalMR5_RS24100 () | 19083..19280 | - | 198 | Protein_25 | hypothetical protein | - |
| PsalMR5_RS24105 () | 19277..19672 | - | 396 | WP_155081932.1 | HK97 gp10 family phage protein | - |
| PsalMR5_RS24110 () | 19665..19988 | - | 324 | WP_155081933.1 | phage head closure protein | - |
| PsalMR5_RS24115 () | 19985..20296 | - | 312 | WP_155081934.1 | head-tail connector protein | - |
| PsalMR5_RS24120 () | 20485..20901 | - | 417 | WP_155081935.1 | hypothetical protein | - |
| PsalMR5_RS25110 () | 21060..21215 | - | 156 | WP_196215088.1 | hypothetical protein | - |
| PsalMR5_RS24125 () | 21284..21868 | - | 585 | WP_155081936.1 | hypothetical protein | - |
| PsalMR5_RS24130 () | 22023..22832 | - | 810 | WP_196215089.1 | phage major capsid protein | - |
| PsalMR5_RS24135 () | 23026..24219 | - | 1194 | WP_155081938.1 | IS91 family transposase ISVsa9 | Transposase |
| PsalMR5_RS24140 () | 24257..25231 | - | 975 | WP_155079445.1 | IS30 family transposase ISMae39 | Transposase |
| PsalMR5_RS24145 () | 25499..25855 | - | 357 | WP_155081939.1 | hypothetical protein | - |
| PsalMR5_RS24150 () | 25911..26582 | - | 672 | WP_155081940.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| PsalMR5_RS24155 () | 26530..27771 | - | 1242 | WP_155081941.1 | phage portal protein | - |
| PsalMR5_RS24160 () | 27768..28745 | - | 978 | WP_155081942.1 | terminase large subunit | - |
| PsalMR5_RS24165 () | 28783..29757 | - | 975 | WP_155079741.1 | IS30 family transposase ISMae39 | Transposase |
| PsalMR5_RS24170 () | 29817..30047 | - | 231 | WP_155081943.1 | hypothetical protein | - |
| PsalMR5_RS24175 () | 30268..31053 | - | 786 | WP_155081944.1 | DNA/RNA non-specific endonuclease | - |
| PsalMR5_RS24180 () | 31065..31472 | - | 408 | WP_016210974.1 | DUF4411 family protein | Toxin Detail |
| PsalMR5_RS24185 () | 31481..31708 | - | 228 | WP_027242932.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| PsalMR5_RS24190 () | 31856..32221 | - | 366 | WP_155081945.1 | hypothetical protein | - |
| PsalMR5_RS24195 () | 32370..32840 | - | 471 | WP_155081946.1 | single-stranded DNA-binding protein | - |
| PsalMR5_RS24200 () | 32844..33074 | - | 231 | WP_155081947.1 | hypothetical protein | - |
| PsalMR5_RS24205 () | 33321..34295 | - | 975 | WP_155081450.1 | IS30 family transposase ISMae39 | Transposase |
| PsalMR5_RS25115 () | 34340..34477 | + | 138 | WP_196215084.1 | hypothetical protein | - |
| PsalMR5_RS24215 () | 34518..34856 | - | 339 | WP_155081949.1 | hypothetical protein | - |
| PsalMR5_RS24220 () | 35091..35648 | - | 558 | WP_155079478.1 | IS630 family transposase ISOt3 | Transposase |
| PsalMR5_RS24225 () | 35632..36018 | - | 387 | WP_155079476.1 | IS630 family transposase ISFtu1 | Transposase |
| PsalMR5_RS24230 () | 36015..37133 | - | 1119 | WP_155081950.1 | replication initiation protein | - |
| PsalMR5_RS24240 () | 37667..37828 | - | 162 | WP_155081952.1 | hypothetical protein | - |
| PsalMR5_RS24245 () | 37906..38208 | - | 303 | WP_155081953.1 | hypothetical protein | - |
| PsalMR5_RS24250 () | 38602..39006 | + | 405 | WP_196215085.1 | hypothetical protein | - |
| PsalMR5_RS24255 () | 39006..39473 | + | 468 | WP_155081955.1 | helix-turn-helix domain-containing protein | - |
| PsalMR5_RS24260 () | 39503..39934 | + | 432 | WP_155081956.1 | hypothetical protein | - |
| PsalMR5_RS24265 () | 40071..41300 | + | 1230 | WP_155079612.1 | IS91 family transposase ISVsa9 | Transposase |
| PsalMR5_RS24270 () | 41731..41955 | + | 225 | WP_155081957.1 | hypothetical protein | - |
| PsalMR5_RS24275 () | 41974..42360 | + | 387 | WP_155079476.1 | IS630 family transposase ISFtu1 | Transposase |
| PsalMR5_RS24280 () | 42422..42574 | + | 153 | WP_155080667.1 | hypothetical protein | - |
| PsalMR5_RS24285 () | 42593..42979 | + | 387 | WP_155079476.1 | IS630 family transposase ISFtu1 | Transposase |
| PsalMR5_RS24290 () | 42963..43520 | + | 558 | WP_155079478.1 | IS630 family transposase ISOt3 | Transposase |
| PsalMR5_RS24295 () | 43539..43859 | + | 321 | WP_155080465.1 | IS630 family transposase ISOt3 | Transposase |
| PsalMR5_RS24300 () | 43955..44995 | + | 1041 | WP_155081958.1 | alkene reductase | - |
| PsalMR5_RS24305 () | 44984..45781 | - | 798 | WP_155081959.1 | methyltransferase domain-containing protein | - |
| PsalMR5_RS24310 () | 46102..46416 | - | 315 | WP_017377662.1 | hypothetical protein | - |
| PsalMR5_RS24315 () | 46427..46756 | - | 330 | WP_017377663.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| PsalMR5_RS24320 () | 47009..48259 | - | 1251 | WP_155081960.1 | MFS transporter | - |
| PsalMR5_RS24325 () | 48347..49432 | - | 1086 | WP_155081961.1 | helix-turn-helix domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|