MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 56994 bp
Accession: NZ_CP039231 Location: 1..56994 Organism: Piscirickettsia salmonis strain SR1 Replicon: plasmid unnamed4
Accession: NZ_CP039231 Location: 1..56994 Organism: Piscirickettsia salmonis strain SR1 Replicon: plasmid unnamed4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PsalSR1_RS23785 () | 1..747 | + | 747 | WP_016211894.1 | AAA family ATPase | - |
| PsalSR1_RS23790 () | 748..1152 | + | 405 | WP_155081876.1 | hypothetical protein | - |
| PsalSR1_RS23795 () | 1639..1932 | + | 294 | WP_155081877.1 | hypothetical protein | - |
| PsalSR1_RS23800 () | 1997..2479 | - | 483 | WP_155081878.1 | hypothetical protein | - |
| PsalSR1_RS23805 () | 2624..3073 | - | 450 | WP_155081879.1 | hypothetical protein | - |
| PsalSR1_RS23810 () | 3133..3363 | - | 231 | WP_155081880.1 | hypothetical protein | - |
| PsalSR1_RS23815 () | 3634..3984 | - | 351 | WP_155081881.1 | J domain-containing protein | - |
| PsalSR1_RS23820 () | 4053..4424 | - | 372 | WP_155081882.1 | hypothetical protein | - |
| PsalSR1_RS23825 () | 4875..5114 | + | 240 | WP_155081883.1 | hypothetical protein | - |
| PsalSR1_RS23830 () | 5561..5914 | + | 354 | WP_017377521.1 | hypothetical protein | - |
| PsalSR1_RS23835 () | 5956..7569 | + | 1614 | WP_155081884.1 | DEAD/DEAH box helicase | - |
| PsalSR1_RS23840 () | 7690..10806 | - | 3117 | WP_155081885.1 | DEAD/DEAH box helicase | - |
| PsalSR1_RS23845 () | 10796..11611 | - | 816 | WP_155081886.1 | virulence associated protein | - |
| PsalSR1_RS23850 () | 11781..12167 | - | 387 | WP_155081887.1 | type II toxin-antitoxin system VapC family toxin | - |
| PsalSR1_RS23855 () | 12164..12409 | - | 246 | WP_155081888.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| PsalSR1_RS23860 () | 12694..13668 | - | 975 | WP_155079741.1 | IS30 family transposase | - |
| PsalSR1_RS23865 () | 13874..14140 | - | 267 | WP_155081889.1 | transposase | - |
| PsalSR1_RS23870 () | 14436..16343 | - | 1908 | WP_155589637.1 | DUF1561 family protein | - |
| PsalSR1_RS23875 () | 16408..16530 | - | 123 | Protein_18 | IS6 family transposase | - |
| PsalSR1_RS23880 () | 16529..18580 | + | 2052 | WP_155081891.1 | DUF1561 family protein | - |
| PsalSR1_RS23885 () | 18853..18942 | - | 90 | Protein_20 | IS6 family transposase | - |
| PsalSR1_RS23890 () | 19036..19269 | + | 234 | WP_155081892.1 | helix-turn-helix domain-containing protein | - |
| PsalSR1_RS23895 () | 19289..19570 | - | 282 | Protein_22 | IS30 family transposase | - |
| PsalSR1_RS23900 () | 19606..20580 | - | 975 | WP_155079741.1 | IS30 family transposase | - |
| PsalSR1_RS23905 () | 20625..21113 | + | 489 | WP_155081893.1 | IS30 family transposase | - |
| PsalSR1_RS23910 () | 21378..22352 | + | 975 | WP_155079741.1 | IS30 family transposase | - |
| PsalSR1_RS23915 () | 22593..23306 | - | 714 | WP_155081894.1 | acid phosphatase | - |
| PsalSR1_RS23920 () | 23393..23497 | - | 105 | Protein_27 | transposase | - |
| PsalSR1_RS23925 () | 23711..24685 | - | 975 | WP_155079445.1 | IS30 family transposase | - |
| PsalSR1_RS23930 () | 24910..25164 | + | 255 | WP_122942818.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | Antitoxin Detail |
| PsalSR1_RS23935 () | 25154..25441 | + | 288 | WP_155081895.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PsalSR1_RS23945 () | 25765..25956 | + | 192 | WP_155079454.1 | hypothetical protein | - |
| PsalSR1_RS23950 () | 26135..26830 | + | 696 | Protein_32 | C40 family peptidase | - |
| PsalSR1_RS25605 () | 26884..27718 | - | 835 | Protein_33 | IS630 family transposase | - |
| PsalSR1_RS23965 () | 27785..28321 | + | 537 | Protein_34 | IS6 family transposase | - |
| PsalSR1_RS23970 () | 28376..28534 | + | 159 | Protein_35 | hypothetical protein | - |
| PsalSR1_RS23975 () | 28684..29472 | + | 789 | WP_155079983.1 | IS30 family transposase | - |
| PsalSR1_RS23980 () | 29476..29724 | - | 249 | WP_155080231.1 | hypothetical protein | - |
| PsalSR1_RS23985 () | 29780..30088 | + | 309 | WP_155079958.1 | hypothetical protein | - |
| PsalSR1_RS23990 () | 30085..30435 | + | 351 | WP_155079959.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| PsalSR1_RS23995 () | 30478..31959 | + | 1482 | WP_155080444.1 | IS66 family transposase | - |
| PsalSR1_RS24000 () | 32108..32458 | + | 351 | WP_155066936.1 | IS630 transposase-related protein | - |
| PsalSR1_RS24005 () | 32490..32942 | + | 453 | WP_155068622.1 | IS630 family transposase | - |
| PsalSR1_RS24010 () | 32951..34165 | - | 1215 | WP_155589638.1 | transposase | - |
| PsalSR1_RS24015 () | 34419..35804 | + | 1386 | WP_155081897.1 | hypothetical protein | - |
| PsalSR1_RS24025 () | 36007..36771 | - | 765 | WP_196215182.1 | IS3 family transposase | - |
| PsalSR1_RS24030 () | 36912..37157 | + | 246 | WP_196215078.1 | transposase zinc-binding domain-containing protein | - |
| PsalSR1_RS24035 () | 37076..37543 | + | 468 | WP_196215079.1 | transposase | - |
| PsalSR1_RS24040 () | 37563..38555 | - | 993 | WP_155081899.1 | IS30 family transposase | - |
| PsalSR1_RS25610 () | 38490..38636 | + | 147 | WP_196215080.1 | hypothetical protein | - |
| PsalSR1_RS24045 () | 38795..39442 | + | 648 | WP_196215184.1 | transposase | - |
| PsalSR1_RS24050 () | 39957..40940 | + | 984 | WP_155589639.1 | IS30 family transposase | - |
| PsalSR1_RS24055 () | 41137..41487 | + | 351 | WP_155066936.1 | IS630 transposase-related protein | - |
| PsalSR1_RS24060 () | 41414..41572 | + | 159 | WP_155081901.1 | hypothetical protein | - |
| PsalSR1_RS24065 () | 41567..42019 | - | 453 | WP_155081465.1 | IS630 family transposase | - |
| PsalSR1_RS24070 () | 42051..42401 | - | 351 | WP_155066936.1 | IS630 transposase-related protein | - |
| PsalSR1_RS24075 () | 42471..42887 | + | 417 | WP_155067991.1 | transposase | - |
| PsalSR1_RS24080 () | 42874..43461 | + | 588 | WP_155081902.1 | IS30 family transposase | - |
| PsalSR1_RS24085 () | 43477..43929 | - | 453 | WP_155080102.1 | IS200/IS605 family transposase | - |
| PsalSR1_RS24090 () | 43979..44425 | + | 447 | Protein_59 | IS30 family transposase | - |
| PsalSR1_RS24095 () | 44621..45490 | - | 870 | WP_155081903.1 | hypothetical protein | - |
| PsalSR1_RS24100 () | 45696..46280 | + | 585 | Protein_61 | IS6 family transposase | - |
| PsalSR1_RS24105 () | 46286..46861 | - | 576 | WP_155066610.1 | IS630 family transposase | - |
| PsalSR1_RS24110 () | 46807..47172 | - | 366 | WP_155079588.1 | IS630 transposase-related protein | - |
| PsalSR1_RS24115 () | 47237..47383 | + | 147 | Protein_64 | IS6 family transposase | - |
| PsalSR1_RS24120 () | 47352..47498 | - | 147 | WP_155081905.1 | hypothetical protein | - |
| PsalSR1_RS24125 () | 47565..47897 | + | 333 | WP_155081906.1 | hypothetical protein | - |
| PsalSR1_RS24130 () | 47990..48220 | + | 231 | WP_155081907.1 | hypothetical protein | - |
| PsalSR1_RS24135 () | 48461..48859 | + | 399 | WP_155589640.1 | hypothetical protein | - |
| PsalSR1_RS24140 () | 49004..49147 | + | 144 | WP_155589641.1 | hypothetical protein | - |
| PsalSR1_RS24145 () | 49247..49879 | + | 633 | WP_155081909.1 | transposase zinc-binding domain-containing protein | - |
| PsalSR1_RS24150 () | 49842..50234 | + | 393 | WP_196215082.1 | transposase | - |
| PsalSR1_RS24155 () | 50231..50788 | - | 558 | WP_155079478.1 | IS630 family transposase | - |
| PsalSR1_RS24160 () | 50772..51158 | - | 387 | WP_155079476.1 | helix-turn-helix domain-containing protein | - |
| PsalSR1_RS24165 () | 51289..51924 | + | 636 | WP_196215083.1 | IS30 family transposase | - |
| PsalSR1_RS24170 () | 52171..52551 | + | 381 | Protein_75 | IS30 family transposase | - |
| PsalSR1_RS24175 () | 52687..52833 | + | 147 | WP_155080251.1 | hypothetical protein | - |
| PsalSR1_RS24180 () | 53129..53575 | - | 447 | WP_155068155.1 | hypothetical protein | - |
| PsalSR1_RS24185 () | 53704..54207 | - | 504 | Protein_78 | IS30 family transposase | - |
| PsalSR1_RS24190 () | 54393..54893 | - | 501 | WP_155589642.1 | helix-turn-helix domain-containing protein | - |
| PsalSR1_RS24195 () | 55437..56486 | - | 1050 | WP_155081912.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|