MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 79943 bp
Accession: NZ_CP039216 Location: 1..79943 Organism: Piscirickettsia salmonis strain Psal-104a Replicon: plasmid unnamed2
Accession: NZ_CP039216 Location: 1..79943 Organism: Piscirickettsia salmonis strain Psal-104a Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Psal104a_RS17515 () | 1..738 | + | 738 | WP_016211671.1 | ParA family protein | - |
| Psal104a_RS17520 () | 731..1096 | + | 366 | WP_016211673.1 | hypothetical protein | - |
| Psal104a_RS17525 () | 1768..2049 | + | 282 | WP_016211674.1 | hypothetical protein | - |
| Psal104a_RS17530 () | 2033..2317 | + | 285 | WP_032126620.1 | hypothetical protein | - |
| Psal104a_RS17535 () | 2324..2479 | + | 156 | WP_016211672.1 | hypothetical protein | - |
| Psal104a_RS17540 () | 2651..3301 | + | 651 | WP_016211670.1 | helix-turn-helix domain-containing protein | - |
| Psal104a_RS17545 () | 3312..4394 | - | 1083 | WP_054300162.1 | IS481 family transposase ISFw3 | Transposase |
| Psal104a_RS17550 () | 4580..4981 | - | 402 | WP_016212427.1 | GTP cyclohydrolase I family protein | - |
| Psal104a_RS17555 () | 4983..5261 | - | 279 | WP_129556722.1 | VUT family protein | - |
| Psal104a_RS17560 () | 5294..6130 | - | 837 | WP_081377862.1 | IS3 family transposase IS1351 | Transposase |
| Psal104a_RS17565 () | 6142..6414 | - | 273 | WP_032126239.1 | IS3 family transposase ISWsu1 | Transposase |
| Psal104a_RS17570 () | 6481..6822 | - | 342 | WP_080664877.1 | IS3 family transposase | - |
| Psal104a_RS18775 () | 6946..7800 | + | 855 | WP_129556721.1 | IS91 family transposase ISVsa9 | Transposase |
| Psal104a_RS18780 () | 7816..8205 | + | 390 | WP_016212127.1 | IS91 family transposase ISVsa21 | Transposase |
| Psal104a_RS17580 () | 8235..8963 | + | 729 | WP_054300202.1 | IS6 family transposase ISPsa2 | Transposase |
| Psal104a_RS17585 () | 9253..10485 | - | 1233 | WP_032126623.1 | MFS transporter | - |
| Psal104a_RS17590 () | 10596..11147 | - | 552 | Protein_16 | IS30 family transposase IS4351 | Transposase |
| Psal104a_RS17595 () | 11167..12228 | - | 1062 | WP_054300173.1 | IS701 family transposase ISAeme11 | Transposase |
| Psal104a_RS17600 () | 12276..12725 | - | 450 | WP_075275207.1 | IS30 family transposase ISPlu1 | Transposase |
| Psal104a_RS17605 () | 12852..13877 | - | 1026 | WP_032126388.1 | helix-turn-helix domain-containing protein | - |
| Psal104a_RS17610 () | 14638..15660 | + | 1023 | WP_016211377.1 | AAA family ATPase | - |
| Psal104a_RS17615 () | 15684..16553 | + | 870 | WP_016211383.1 | hypothetical protein | - |
| Psal104a_RS17620 () | 16859..17122 | + | 264 | WP_032126138.1 | RNA-binding protein | - |
| Psal104a_RS17625 () | 17370..17798 | - | 429 | WP_016211378.1 | hypothetical protein | - |
| Psal104a_RS17630 () | 17798..18235 | - | 438 | WP_016211376.1 | hypothetical protein | - |
| Psal104a_RS17635 () | 18235..18888 | - | 654 | WP_016211382.1 | DUF4376 domain-containing protein | - |
| Psal104a_RS17640 () | 18900..19391 | - | 492 | WP_016211381.1 | hypothetical protein | - |
| Psal104a_RS17645 () | 19462..20037 | - | 576 | WP_075273327.1 | IS630 family transposase ISAcma25 | Transposase |
| Psal104a_RS17650 () | 19983..20348 | - | 366 | WP_032126362.1 | IS630 family transposase ISTer1 | Transposase |
| Psal104a_RS17655 () | 20399..20998 | - | 600 | WP_016212400.1 | hypothetical protein | - |
| Psal104a_RS17660 () | 20998..21258 | - | 261 | WP_016212399.1 | hypothetical protein | - |
| Psal104a_RS17665 () | 21388..22541 | + | 1154 | WP_105962623.1 | IS3 family transposase ISMasp3 | Transposase |
| Psal104a_RS17670 () | 22569..23576 | - | 1008 | WP_016212392.1 | hypothetical protein | - |
| Psal104a_RS17675 () | 23640..24368 | + | 729 | WP_075273802.1 | IS6 family transposase ISPsa2 | Transposase |
| Psal104a_RS17680 () | 24552..24899 | + | 348 | WP_016212131.1 | hypothetical protein | - |
| Psal104a_RS17685 () | 25338..26522 | + | 1185 | WP_016212135.1 | 3-methylitaconate isomerase | - |
| Psal104a_RS17690 () | 26569..26673 | + | 105 | Protein_36 | IS6 family transposase | - |
| Psal104a_RS17695 () | 26766..27467 | + | 702 | WP_075275202.1 | IS30 family transposase ISPlu1 | Transposase |
| Psal104a_RS17700 () | 27470..28198 | - | 729 | WP_075275201.1 | IS6 family transposase ISPsa2 | Transposase |
| Psal104a_RS17705 () | 28327..29355 | + | 1029 | WP_016212164.1 | hypothetical protein | - |
| Psal104a_RS17710 () | 30379..31065 | + | 687 | WP_016211443.1 | Fic family protein | - |
| Psal104a_RS17715 () | 31069..31623 | + | 555 | WP_016211439.1 | Tn3 family transposase ISPsy42 | Transposase |
| Psal104a_RS17720 () | 31668..32606 | + | 939 | WP_016211436.1 | Fic family protein | - |
| Psal104a_RS17725 () | 32579..32770 | - | 192 | WP_016211434.1 | hypothetical protein | - |
| Psal104a_RS17730 () | 32948..33298 | - | 351 | WP_016211445.1 | hypothetical protein | - |
| Psal104a_RS17735 () | 33315..33941 | - | 627 | WP_016211437.1 | zinc-ribbon domain-containing protein | - |
| Psal104a_RS17740 () | 33948..34340 | - | 393 | WP_032126541.1 | hypothetical protein | - |
| Psal104a_RS17745 () | 34351..35265 | - | 915 | WP_016211440.1 | hypothetical protein | - |
| Psal104a_RS17750 () | 35535..36041 | + | 507 | WP_016211444.1 | antirestriction protein ArdA | - |
| Psal104a_RS17755 () | 36190..36573 | + | 384 | WP_051307358.1 | hypothetical protein | - |
| Psal104a_RS17760 () | 36857..37087 | - | 231 | WP_129556729.1 | hypothetical protein | - |
| Psal104a_RS17765 () | 37074..37298 | + | 225 | WP_016212541.1 | hypothetical protein | - |
| Psal104a_RS17770 () | 37358..37507 | + | 150 | WP_016212539.1 | hypothetical protein | - |
| Psal104a_RS17775 () | 37504..38478 | - | 975 | WP_036771330.1 | IS30 family transposase ISPlu1 | Transposase |
| Psal104a_RS17780 () | 38522..38701 | + | 180 | WP_016212090.1 | hypothetical protein | - |
| Psal104a_RS17785 () | 38701..39129 | + | 429 | WP_016212087.1 | hypothetical protein | - |
| Psal104a_RS17790 () | 39297..39836 | - | 540 | WP_032126714.1 | hypothetical protein | - |
| Psal104a_RS17795 () | 40073..40303 | - | 231 | WP_016212089.1 | hypothetical protein | - |
| Psal104a_RS17800 () | 40402..41439 | - | 1038 | WP_032126713.1 | hypothetical protein | - |
| Psal104a_RS17805 () | 41909..42880 | - | 972 | WP_033923677.1 | IS91 family transposase ISVsa9 | Transposase |
| Psal104a_RS18785 () | 42805..43044 | - | 240 | WP_075275277.1 | IS91 family transposase ISVsa9 | Transposase |
| Psal104a_RS18790 () | 43216..43500 | + | 285 | Protein_61 | IS30 family transposase IS4351 | Transposase |
| Psal104a_RS17815 () | 43568..44221 | + | 654 | WP_016210964.1 | MFS transporter | - |
| Psal104a_RS17820 () | 44242..44967 | - | 726 | WP_016210975.1 | ester cyclase | - |
| Psal104a_RS17825 () | 45044..45799 | - | 756 | WP_016210971.1 | methyltransferase domain-containing protein | - |
| Psal104a_RS17835 () | 46180..46485 | + | 306 | WP_016210958.1 | hypothetical protein | - |
| Psal104a_RS17840 () | 46639..46938 | + | 300 | WP_016210976.1 | hypothetical protein | - |
| Psal104a_RS17845 () | 46985..47800 | + | 816 | WP_016210962.1 | hypothetical protein | - |
| Psal104a_RS17850 () | 47823..48383 | + | 561 | WP_016210973.1 | hypothetical protein | - |
| Psal104a_RS17855 () | 48352..48714 | + | 363 | WP_016210959.1 | hypothetical protein | - |
| Psal104a_RS17860 () | 48707..49054 | + | 348 | WP_016210966.1 | hypothetical protein | - |
| Psal104a_RS17865 () | 49051..49290 | + | 240 | WP_016210963.1 | hypothetical protein | - |
| Psal104a_RS17870 () | 49386..49673 | + | 288 | WP_036794065.1 | hypothetical protein | - |
| Psal104a_RS17875 () | 49670..49954 | + | 285 | WP_036794070.1 | hypothetical protein | - |
| Psal104a_RS17880 () | 49956..50429 | + | 474 | WP_016210960.1 | single-stranded DNA-binding protein | - |
| Psal104a_RS17885 () | 50544..50936 | + | 393 | WP_129556726.1 | hypothetical protein | - |
| Psal104a_RS17890 () | 51084..51311 | + | 228 | WP_016210972.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| Psal104a_RS17895 () | 51320..51727 | + | 408 | WP_016210974.1 | DUF4411 family protein | Toxin Detail |
| Psal104a_RS17900 () | 51844..52524 | + | 681 | WP_129556725.1 | DNA/RNA non-specific endonuclease | - |
| Psal104a_RS17905 () | 52703..52996 | + | 294 | WP_016210977.1 | zinc ribbon domain-containing protein | - |
| Psal104a_RS17910 () | 53214..53396 | - | 183 | WP_129556724.1 | hypothetical protein | - |
| Psal104a_RS17915 () | 53541..53720 | - | 180 | WP_155046773.1 | phosphatase | - |
| Psal104a_RS17920 () | 53815..54132 | + | 318 | WP_129556723.1 | hypothetical protein | - |
| Psal104a_RS17925 () | 54433..54816 | + | 384 | WP_032126134.1 | HNH endonuclease | - |
| Psal104a_RS17930 () | 54904..55383 | + | 480 | WP_016212234.1 | P27 family phage terminase small subunit | - |
| Psal104a_RS17935 () | 55387..55596 | + | 210 | WP_016212231.1 | hypothetical protein | - |
| Psal104a_RS17940 () | 55651..55968 | + | 318 | WP_164997282.1 | hypothetical protein | - |
| Psal104a_RS17945 () | 55987..57069 | + | 1083 | WP_081377926.1 | terminase large subunit | - |
| Psal104a_RS17950 () | 57066..58307 | + | 1242 | WP_016211136.1 | phage portal protein | - |
| Psal104a_RS17955 () | 58270..58926 | + | 657 | WP_016211130.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| Psal104a_RS17960 () | 58984..60177 | + | 1194 | WP_016211140.1 | phage major capsid protein | - |
| Psal104a_RS17965 () | 60298..61632 | + | 1335 | WP_016211133.1 | hypothetical protein | - |
| Psal104a_RS18795 () | 61671..61826 | + | 156 | WP_016211131.1 | hypothetical protein | - |
| Psal104a_RS17970 () | 61823..62134 | + | 312 | WP_016211137.1 | head-tail connector protein | - |
| Psal104a_RS17975 () | 62131..62454 | + | 324 | WP_016211132.1 | phage head closure protein | - |
| Psal104a_RS17980 () | 62447..62842 | + | 396 | WP_016211139.1 | HK97 gp10 family phage protein | - |
| Psal104a_RS17985 () | 62839..63189 | + | 351 | WP_016211129.1 | DUF3168 domain-containing protein | - |
| Psal104a_RS17990 () | 63189..63611 | + | 423 | WP_016211141.1 | hypothetical protein | - |
| Psal104a_RS17995 () | 63613..63936 | + | 324 | WP_032126913.1 | hypothetical protein | - |
| Psal104a_RS18000 () | 63993..64259 | + | 267 | WP_016211142.1 | DUF4035 domain-containing protein | - |
| Psal104a_RS18005 () | 64263..66341 | + | 2079 | WP_032126912.1 | hypothetical protein | - |
| Psal104a_RS18010 () | 66334..66675 | + | 342 | WP_016210657.1 | phage tail protein | - |
| Psal104a_RS18015 () | 66672..67343 | + | 672 | WP_016210666.1 | phage minor tail protein L | - |
| Psal104a_RS18020 () | 67312..68058 | + | 747 | WP_032126911.1 | C40 family peptidase | - |
| Psal104a_RS18025 () | 68048..68605 | + | 558 | WP_016210665.1 | tail assembly protein | - |
| Psal104a_RS18030 () | 68612..68899 | - | 288 | WP_016210662.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| Psal104a_RS18035 () | 68889..69143 | - | 255 | WP_016210670.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | Antitoxin Detail |
| Psal104a_RS18040 () | 69237..72524 | + | 3288 | WP_016210653.1 | host specificity protein J | - |
| Psal104a_RS18045 () | 72524..73663 | + | 1140 | WP_032126910.1 | hypothetical protein | - |
| Psal104a_RS18050 () | 73675..74328 | + | 654 | WP_027242941.1 | DUF4376 domain-containing protein | - |
| Psal104a_RS18055 () | 74328..74765 | + | 438 | WP_032126909.1 | hypothetical protein | - |
| Psal104a_RS18060 () | 74765..75193 | + | 429 | WP_059372253.1 | hypothetical protein | - |
| Psal104a_RS18065 () | 75587..76690 | - | 1104 | WP_016211978.1 | hypothetical protein | - |
| Psal104a_RS18070 () | 76976..77206 | - | 231 | WP_016211980.1 | hypothetical protein | - |
| Psal104a_RS18075 () | 77390..78364 | + | 975 | WP_075275209.1 | IS30 family transposase ISPlu1 | Transposase |
| Psal104a_RS18080 () | 78411..79481 | - | 1071 | WP_016211676.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|