MGE detailed information
MGE type: IScluster/Tn MGE length: 33183 bp
Accession: NZ_CP039215 Location: 11619..44801 Organism: Piscirickettsia salmonis strain Psal-104a Replicon: plasmid unnamed1
Accession: NZ_CP039215 Location: 11619..44801 Organism: Piscirickettsia salmonis strain Psal-104a Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Psal104a_RS16485 () | 6803..7117 | - | 315 | WP_016212150.1 | hypothetical protein | - |
| Psal104a_RS16490 () | 7174..8223 | - | 1050 | WP_033923686.1 | transposase | - |
| Psal104a_RS16495 () | 8332..9372 | - | 1041 | WP_016211885.1 | DNA-binding protein | - |
| Psal104a_RS16500 () | 9386..10015 | - | 630 | WP_129556706.1 | hypothetical protein | - |
| Psal104a_RS16505 () | 10106..10405 | - | 300 | WP_016211884.1 | nucleotidyltransferase domain-containing protein | - |
| Psal104a_RS16510 () | 10402..10830 | - | 429 | WP_016211886.1 | nucleotidyltransferase substrate binding protein | - |
| Psal104a_RS16515 () | 11619..12346 | - | 728 | Protein_16 | IS6 family transposase ISPsa2 | Transposase |
| Psal104a_RS16520 () | 12591..13499 | + | 909 | WP_032126832.1 | Sensor histidine kinase RcsC | VF |
| Psal104a_RS16525 () | 13610..14338 | - | 729 | WP_054300202.1 | IS6 family transposase ISPsa2 | Transposase |
| Psal104a_RS16530 () | 14406..14564 | - | 159 | WP_155062492.1 | hypothetical protein | - |
| Psal104a_RS16535 () | 14515..15429 | + | 915 | Protein_20 | IS30 family transposase IS1655 | Transposase |
| Psal104a_RS16540 () | 15478..16206 | + | 729 | WP_054300202.1 | IS6 family transposase ISPsa2 | Transposase |
| Psal104a_RS16545 () | 16410..18986 | + | 2577 | WP_016211890.1 | hypothetical protein | - |
| Psal104a_RS16555 () | 19392..20366 | + | 975 | WP_075274822.1 | IS30 family transposase ISPlu1 | Transposase |
| Psal104a_RS16560 () | 20409..20543 | - | 135 | Protein_24 | IS3 family transposase | - |
| Psal104a_RS16565 () | 20567..21295 | - | 729 | WP_075274931.1 | IS6 family transposase ISPsa2 | Transposase |
| Psal104a_RS16570 () | 21365..21709 | + | 345 | Protein_26 | IS481 family transposase ISWpi2 | Transposase |
| Psal104a_RS16575 () | 21739..22800 | - | 1062 | WP_016212137.1 | hypothetical protein | - |
| Psal104a_RS16580 () | 22876..23121 | - | 246 | WP_016212139.1 | hypothetical protein | - |
| Psal104a_RS16585 () | 23093..23707 | - | 615 | WP_051307371.1 | hypothetical protein | - |
| Psal104a_RS16590 () | 23914..24432 | - | 519 | Protein_30 | IS6 family transposase ISPsa2 | Transposase |
| Psal104a_RS16595 () | 24525..25499 | + | 975 | WP_075274955.1 | IS30 family transposase ISPlu1 | Transposase |
| Psal104a_RS16600 () | 25530..25748 | - | 219 | Protein_32 | IS6 family transposase ISPsa2 | Transposase |
| Psal104a_RS16605 () | 25859..26878 | - | 1020 | WP_129556707.1 | hypothetical protein | - |
| Psal104a_RS16615 () | 28805..29077 | + | 273 | WP_032126239.1 | IS3 family transposase ISWsu1 | Transposase |
| Psal104a_RS16620 () | 29089..29925 | + | 837 | WP_033923779.1 | IS3 family transposase IS1351 | Transposase |
| Psal104a_RS16625 () | 29958..30689 | + | 732 | WP_075275144.1 | IS6 family transposase ISPsa2 | Transposase |
| Psal104a_RS16630 () | 30787..31200 | + | 414 | WP_016212014.1 | DUF2190 family protein | - |
| Psal104a_RS16635 () | 31495..31893 | + | 399 | WP_016212017.1 | hypothetical protein | - |
| Psal104a_RS16640 () | 31923..32168 | + | 246 | WP_047927838.1 | hypothetical protein | - |
| Psal104a_RS16645 () | 32165..32464 | + | 300 | WP_016212018.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| Psal104a_RS16650 () | 32621..33316 | - | 696 | WP_016212019.1 | IS6 family transposase ISSba18 | Transposase |
| Psal104a_RS16655 () | 33652..34029 | + | 378 | Protein_43 | IS6 family transposase ISPsa2 | Transposase |
| Psal104a_RS16660 () | 34130..34909 | + | 780 | WP_081377351.1 | IS91 family transposase ISVa3 | Transposase |
| Psal104a_RS16670 () | 35098..35430 | + | 333 | WP_032126739.1 | IS91 family transposase ISEc37 | Transposase |
| Psal104a_RS16675 () | 35595..35972 | + | 378 | WP_016212154.1 | IS3 family transposase ISSde6 | Transposase |
| Psal104a_RS16680 () | 36279..36662 | - | 384 | WP_016212152.1 | hypothetical protein | - |
| Psal104a_RS16685 () | 37132..37860 | - | 729 | WP_054300202.1 | IS6 family transposase ISPsa2 | Transposase |
| Psal104a_RS16690 () | 37976..38311 | - | 336 | WP_129556708.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| Psal104a_RS16695 () | 38304..38546 | - | 243 | WP_016212365.1 | antidote-toxin recognition MazE family protein | Antitoxin Detail |
| Psal104a_RS16700 () | 38755..39729 | + | 975 | WP_054300271.1 | IS30 family transposase ISPlu1 | Transposase |
| Psal104a_RS16705 () | 39857..40297 | + | 441 | Protein_52 | tyrosine-type recombinase/integrase | - |
| Psal104a_RS16710 () | 40365..41093 | + | 729 | WP_075275142.1 | IS6 family transposase ISPsa2 | Transposase |
| Psal104a_RS16715 () | 41376..43061 | + | 1686 | WP_075275141.1 | protein kinase | - |
| Psal104a_RS18750 () | 43182..43913 | + | 732 | WP_016212311.1 | hypothetical protein | - |
| Psal104a_RS16730 () | 44067..44801 | - | 735 | WP_075275140.1 | IS6 family transposase ISPsa2 | Transposase |
| Psal104a_RS16735 () | 45286..45441 | + | 156 | Protein_57 | transposase | - |
| Psal104a_RS16740 () | 45428..45658 | + | 231 | WP_075275139.1 | hypothetical protein | - |
| Psal104a_RS16745 () | 45999..46217 | + | 219 | WP_016212407.1 | transposase | - |
| Psal104a_RS16750 () | 46273..46506 | + | 234 | WP_016212404.1 | hypothetical protein | - |
| Psal104a_RS16755 () | 46627..47070 | + | 444 | WP_032126756.1 | hypothetical protein | - |
| Psal104a_RS16760 () | 47215..47523 | + | 309 | WP_075275138.1 | hypothetical protein | - |
| Psal104a_RS16765 () | 47728..49389 | + | 1662 | WP_052047124.1 | AAA family ATPase | - |
| Psal104a_RS16770 () | 49399..49800 | - | 402 | WP_016212457.1 | helix-turn-helix domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|