MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 82130 bp
Accession: NZ_CP039192 Location: 1..82130 Organism: Piscirickettsia salmonis strain Psal-160 Replicon: plasmid unnamed2
Accession: NZ_CP039192 Location: 1..82130 Organism: Piscirickettsia salmonis strain Psal-160 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Psal160_RS16435 () | 1..887 | + | 887 | WP_155047025.1 | IS630 family transposase | - |
| Psal160_RS16440 () | 891..1379 | - | 489 | WP_054300642.1 | DnaJ domain-containing protein | - |
| Psal160_RS16445 () | 1448..1819 | - | 372 | WP_047927049.1 | hypothetical protein | - |
| Psal160_RS16450 () | 2267..2500 | + | 234 | WP_027242580.1 | hypothetical protein | - |
| Psal160_RS16455 () | 2677..4863 | + | 2187 | WP_027242581.1 | ATP-dependent RecD-like DNA helicase | - |
| Psal160_RS16460 () | 4873..5274 | - | 402 | WP_027242582.1 | helix-turn-helix domain-containing protein | - |
| Psal160_RS16465 () | 5271..5582 | - | 312 | WP_027242583.1 | type II toxin-antitoxin system HigB family toxin | - |
| Psal160_RS16470 () | 5696..5965 | - | 270 | WP_054300643.1 | WGR domain-containing protein | - |
| Psal160_RS16475 () | 6062..7924 | + | 1863 | WP_027242576.1 | RecX family transcriptional regulator | - |
| Psal160_RS16480 () | 7958..8443 | + | 486 | WP_027242575.1 | hypothetical protein | - |
| Psal160_RS16485 () | 8454..8681 | - | 228 | Protein_10 | transposase | - |
| Psal160_RS16490 () | 8677..8853 | + | 177 | Protein_11 | IS30 family transposase | - |
| Psal160_RS16495 () | 8850..9194 | - | 345 | WP_054300644.1 | hypothetical protein | - |
| Psal160_RS16500 () | 9303..9614 | - | 312 | WP_054300645.1 | HU family DNA-binding protein | - |
| Psal160_RS16505 () | 9671..10642 | + | 972 | WP_054300646.1 | transposase | - |
| Psal160_RS17565 () | 10639..10815 | - | 177 | WP_172673426.1 | transposase | - |
| Psal160_RS17570 () | 10809..11033 | - | 225 | WP_196214208.1 | hypothetical protein | - |
| Psal160_RS16520 () | 11219..11518 | + | 300 | WP_075273685.1 | HU family DNA-binding protein | - |
| Psal160_RS16525 () | 11631..13331 | + | 1701 | WP_054300647.1 | DUF4338 domain-containing protein | - |
| Psal160_RS16530 () | 13357..14592 | + | 1236 | WP_054300648.1 | hypothetical protein | - |
| Psal160_RS16535 () | 14709..15035 | - | 327 | WP_054300674.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| Psal160_RS16540 () | 15037..15279 | - | 243 | WP_054300649.1 | hypothetical protein | Antitoxin Detail |
| Psal160_RS16545 () | 15693..16013 | - | 321 | WP_054300650.1 | hypothetical protein | - |
| Psal160_RS16550 () | 16034..16468 | - | 435 | WP_054300651.1 | hypothetical protein | - |
| Psal160_RS16555 () | 16475..16882 | - | 408 | WP_054300652.1 | hypothetical protein | - |
| Psal160_RS16560 () | 16981..17289 | - | 309 | WP_081007087.1 | helix-turn-helix transcriptional regulator | - |
| Psal160_RS16565 () | 17339..17599 | - | 261 | WP_054300654.1 | hypothetical protein | - |
| Psal160_RS16570 () | 17661..18218 | - | 558 | WP_054300675.1 | recombinase family protein | - |
| Psal160_RS16575 () | 18601..21300 | + | 2700 | WP_075278623.1 | ATP-dependent helicase | - |
| Psal160_RS16580 () | 21365..21628 | - | 264 | WP_054300655.1 | RNA-binding protein | - |
| Psal160_RS16585 () | 22120..22383 | + | 264 | WP_054300656.1 | hypothetical protein | - |
| Psal160_RS16590 () | 22385..22723 | + | 339 | WP_054300657.1 | hypothetical protein | - |
| Psal160_RS16595 () | 22850..23854 | + | 1005 | WP_075273679.1 | SIR2 family protein | - |
| Psal160_RS16600 () | 23867..25591 | + | 1725 | WP_054300659.1 | ATP-binding protein | - |
| Psal160_RS16605 () | 26095..28362 | - | 2268 | WP_054300661.1 | hypothetical protein | - |
| Psal160_RS16610 () | 29111..32500 | - | 3390 | WP_054300676.1 | TM0106 family RecB-like putative nuclease | - |
| Psal160_RS16615 () | 32577..33935 | - | 1359 | WP_075273687.1 | DEAD/DEAH box helicase | - |
| Psal160_RS16620 () | 34025..34591 | - | 567 | WP_054300664.1 | recombinase family protein | - |
| Psal160_RS16625 () | 34595..35281 | - | 687 | WP_017377658.1 | Fic family protein | - |
| Psal160_RS16630 () | 35779..36303 | - | 525 | WP_016212199.1 | hypothetical protein | - |
| Psal160_RS16635 () | 36296..37318 | - | 1023 | WP_016212198.1 | AAA family ATPase | - |
| Psal160_RS16640 () | 38373..39419 | + | 1047 | WP_033923684.1 | hypothetical protein | - |
| Psal160_RS16645 () | 39968..40753 | + | 786 | WP_054300665.1 | class I SAM-dependent methyltransferase | - |
| Psal160_RS16650 () | 40821..41951 | + | 1131 | WP_054300584.1 | hypothetical protein | - |
| Psal160_RS16655 () | 41990..42430 | + | 441 | WP_054300583.1 | thioesterase family protein | - |
| Psal160_RS16660 () | 42438..43175 | + | 738 | WP_054300666.1 | SDR family oxidoreductase | - |
| Psal160_RS16665 () | 43172..43741 | - | 570 | WP_054300667.1 | hypothetical protein | - |
| Psal160_RS16670 () | 43848..44420 | - | 573 | WP_155047022.1 | helix-turn-helix transcriptional regulator | - |
| Psal160_RS16675 () | 44874..45587 | + | 714 | WP_054300669.1 | class I SAM-dependent methyltransferase | - |
| Psal160_RS16680 () | 45600..46073 | + | 474 | WP_054300670.1 | hypothetical protein | - |
| Psal160_RS16685 () | 46089..46832 | + | 744 | WP_081007085.1 | queuosine precursor transporter | - |
| Psal160_RS16690 () | 46832..47278 | + | 447 | WP_054300671.1 | helix-turn-helix domain-containing protein | - |
| Psal160_RS16695 () | 47250..47864 | - | 615 | WP_054300672.1 | helix-turn-helix domain-containing protein | - |
| Psal160_RS16700 () | 48054..48245 | + | 192 | WP_054300607.1 | hypothetical protein | - |
| Psal160_RS17575 () | 48317..48481 | + | 165 | WP_155074367.1 | hypothetical protein | - |
| Psal160_RS16705 () | 48623..48880 | + | 258 | WP_155053509.1 | hypothetical protein | - |
| Psal160_RS16710 () | 49036..49680 | + | 645 | WP_054300609.1 | hypothetical protein | - |
| Psal160_RS16715 () | 49682..50002 | + | 321 | WP_054300610.1 | hypothetical protein | - |
| Psal160_RS16720 () | 50017..50307 | + | 291 | WP_054300611.1 | type IV conjugative transfer system protein TraL | - |
| Psal160_RS16725 () | 50315..50884 | + | 570 | WP_054300612.1 | hypothetical protein | - |
| Psal160_RS16730 () | 50877..51581 | + | 705 | WP_054300613.1 | type-F conjugative transfer system secretin TraK | - |
| Psal160_RS16735 () | 51591..53060 | + | 1470 | WP_054300614.1 | hypothetical protein | - |
| Psal160_RS16740 () | 53066..53509 | + | 444 | WP_054300615.1 | type IV conjugative transfer system lipoprotein TraV | - |
| Psal160_RS16745 () | 53597..54619 | + | 1023 | WP_054300616.1 | type IV secretion system DNA-binding domain-containing protein | - |
| Psal160_RS16750 () | 54668..57247 | + | 2580 | WP_054300617.1 | type IV secretion system protein TraC | - |
| Psal160_RS16755 () | 57222..57581 | + | 360 | WP_155047024.1 | hypothetical protein | - |
| Psal160_RS16760 () | 57574..58191 | + | 618 | WP_054300619.1 | type-F conjugative transfer system protein TraW | - |
| Psal160_RS16765 () | 58210..58680 | + | 471 | WP_054300620.1 | hypothetical protein | - |
| Psal160_RS16770 () | 58694..58996 | + | 303 | WP_054300621.1 | hypothetical protein | - |
| Psal160_RS16775 () | 59032..59334 | + | 303 | WP_054300622.1 | hypothetical protein | - |
| Psal160_RS16780 () | 59327..60316 | + | 990 | WP_054300623.1 | conjugal transfer pilus assembly protein TraU | - |
| Psal160_RS16785 () | 60327..60995 | + | 669 | WP_054300624.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| Psal160_RS16790 () | 60995..62890 | + | 1896 | WP_054300625.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| Psal160_RS16795 () | 62887..63699 | + | 813 | WP_054300626.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| Psal160_RS16800 () | 63696..64187 | + | 492 | WP_054300627.1 | conjugal transfer protein TraF | - |
| Psal160_RS16805 () | 64180..65562 | + | 1383 | WP_054300628.1 | conjugal transfer protein TraH | - |
| Psal160_RS16810 () | 65564..68353 | + | 2790 | WP_054300629.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| Psal160_RS16815 () | 68361..68678 | - | 318 | WP_054300630.1 | hypothetical protein | - |
| Psal160_RS16820 () | 68761..69504 | + | 744 | WP_054300631.1 | complement resistance protein TraT | - |
| Psal160_RS16825 () | 69543..69863 | + | 321 | WP_054300632.1 | hypothetical protein | - |
| Psal160_RS16830 () | 70431..72425 | + | 1995 | WP_054300634.1 | type IV conjugative transfer system coupling protein TraD | - |
| Psal160_RS16835 () | 72428..73177 | + | 750 | WP_054300635.1 | thioredoxin domain-containing protein | - |
| Psal160_RS16840 () | 73189..73368 | + | 180 | WP_054300636.1 | hypothetical protein | - |
| Psal160_RS16845 () | 73459..79437 | + | 5979 | WP_081007081.1 | conjugative transfer relaxase/helicase TraI | - |
| Psal160_RS16850 () | 79432..79761 | - | 330 | WP_054300638.1 | hypothetical protein | - |
| Psal160_RS16855 () | 79752..80195 | - | 444 | WP_054300639.1 | hypothetical protein | - |
| Psal160_RS16860 () | 80782..81075 | + | 294 | WP_036774899.1 | hypothetical protein | - |
| Psal160_RS16865 () | 81139..81927 | - | 789 | WP_054300640.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|