MGE detailed information
MGE type: IScluster/Tn MGE length: 31349 bp
Accession: NZ_CP039113 Location: 2129..33477 Organism: Piscirickettsia salmonis strain Psal-135 Replicon: plasmid unnamed1
Accession: NZ_CP039113 Location: 2129..33477 Organism: Piscirickettsia salmonis strain Psal-135 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Psal135_RS16135 () | 1413..1658 | + | 246 | WP_017377655.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| Psal135_RS16140 () | 1655..2041 | + | 387 | WP_017377656.1 | type II toxin-antitoxin system VapC family toxin | - |
| Psal135_RS16145 () | 2129..2857 | + | 729 | WP_036772434.1 | IS6 family transposase | - |
| Psal135_RS16150 () | 2836..3456 | + | 621 | WP_080963659.1 | ABC transporter permease | - |
| Psal135_RS16155 () | 3802..4488 | + | 687 | WP_017377658.1 | Fic family protein | - |
| Psal135_RS16160 () | 4492..4617 | + | 126 | Protein_6 | recombinase family protein | - |
| Psal135_RS16165 () | 4683..5408 | - | 726 | Protein_7 | IS6 family transposase | - |
| Psal135_RS16170 () | 5438..5800 | - | 363 | WP_082304501.1 | hypothetical protein | - |
| Psal135_RS16175 () | 5803..7542 | - | 1740 | WP_016212146.1 | PLD-like domain protein | - |
| Psal135_RS16180 () | 7944..8096 | + | 153 | WP_155046629.1 | hypothetical protein | - |
| Psal135_RS16185 () | 8124..8807 | - | 684 | WP_051929558.1 | IS5 family transposase | - |
| Psal135_RS16190 () | 8889..9866 | + | 978 | WP_036771347.1 | IS5 family transposase | - |
| Psal135_RS16195 () | 9942..10112 | + | 171 | WP_081000019.1 | integrase core domain-containing protein | - |
| Psal135_RS16200 () | 10153..10881 | + | 729 | WP_048876210.1 | IS6 family transposase | - |
| Psal135_RS16205 () | 11427..11693 | - | 267 | WP_036771293.1 | transposase | - |
| Psal135_RS16210 () | 11989..13887 | - | 1899 | WP_036772437.1 | DUF1561 family protein | - |
| Psal135_RS16215 () | 13967..14089 | - | 123 | Protein_17 | IS6 family transposase | - |
| Psal135_RS16220 () | 14309..15037 | + | 729 | WP_017377694.1 | IS6-like element ISPsa2 family transposase | - |
| Psal135_RS16225 () | 15135..15257 | + | 123 | WP_082884401.1 | IS3 family transposase | - |
| Psal135_RS16230 () | 15674..15838 | + | 165 | WP_155046630.1 | hypothetical protein | - |
| Psal135_RS16235 () | 15859..17145 | + | 1287 | WP_017375754.1 | hypothetical protein | - |
| Psal135_RS16240 () | 17328..18056 | + | 729 | WP_036771359.1 | IS6 family transposase | - |
| Psal135_RS16245 () | 18184..19161 | - | 978 | WP_036771347.1 | IS5 family transposase | - |
| Psal135_RS16250 () | 19236..19886 | + | 651 | WP_155046631.1 | hypothetical protein | - |
| Psal135_RS16255 () | 19970..20176 | + | 207 | Protein_25 | IS6 family transposase | - |
| Psal135_RS16260 () | 20227..20394 | - | 168 | Protein_26 | IS6 family transposase | - |
| Psal135_RS16265 () | 20464..21096 | + | 633 | Protein_27 | IS6-like element ISPsa2 family transposase | - |
| Psal135_RS16270 () | 21162..21728 | - | 567 | Protein_28 | IS6 family transposase | - |
| Psal135_RS16275 () | 22014..22178 | - | 165 | Protein_29 | IS6 family transposase | - |
| Psal135_RS16280 () | 22518..22778 | + | 261 | WP_032126795.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| Psal135_RS16285 () | 22782..23054 | + | 273 | WP_036772441.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| Psal135_RS16290 () | 23130..23858 | + | 729 | WP_017375910.1 | IS6 family transposase | - |
| Psal135_RS16295 () | 24428..25492 | - | 1065 | WP_174872554.1 | IS91 family transposase | - |
| Psal135_RS18670 () | 25672..25851 | - | 180 | WP_157894752.1 | hypothetical protein | - |
| Psal135_RS16300 () | 26264..27091 | + | 828 | WP_048876208.1 | IS30 family transposase | - |
| Psal135_RS16305 () | 27134..27863 | - | 730 | Protein_36 | IS6 family transposase | - |
| Psal135_RS16310 () | 27945..28415 | - | 471 | WP_036771289.1 | hypothetical protein | - |
| Psal135_RS16315 () | 29065..29241 | - | 177 | Protein_38 | IS30 family transposase | - |
| Psal135_RS16320 () | 29309..29452 | - | 144 | WP_155046633.1 | hypothetical protein | - |
| Psal135_RS16325 () | 29714..30325 | - | 612 | Protein_40 | IS6-like element ISPsa2 family transposase | - |
| Psal135_RS16330 () | 30659..31195 | - | 537 | WP_075275480.1 | DUF1353 domain-containing protein | - |
| Psal135_RS18675 () | 31233..31400 | + | 168 | WP_169834792.1 | hypothetical protein | - |
| Psal135_RS16335 () | 31612..32388 | - | 777 | WP_017375850.1 | N-acetylmuramoyl-L-alanine amidase | - |
| Psal135_RS16340 () | 32749..33477 | + | 729 | WP_036771279.1 | IS6 family transposase | - |
| Psal135_RS16345 () | 33547..33747 | + | 201 | WP_155046634.1 | transposase zinc-binding domain-containing protein | - |
| Psal135_RS16350 () | 33666..34637 | + | 972 | WP_048876229.1 | IS91 family transposase | - |
| Psal135_RS16355 () | 35051..35419 | + | 369 | WP_027242938.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| Psal135_RS16360 () | 35421..35729 | + | 309 | WP_017375972.1 | helix-turn-helix domain-containing protein | - |
| Psal135_RS16365 () | 36174..36383 | + | 210 | WP_017375841.1 | hypothetical protein | - |
| Psal135_RS16370 () | 36690..36908 | + | 219 | WP_027242937.1 | hypothetical protein | - |
| Psal135_RS16375 () | 36905..37357 | + | 453 | WP_027242936.1 | hypothetical protein | - |
| Psal135_RS16380 () | 37485..37715 | + | 231 | WP_144420845.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|