MGE detailed information
MGE type: IScluster/Tn MGE length: 17007 bp
Accession: NZ_CP039082 Location: 24019..41025 Organism: Piscirickettsia salmonis strain Psal-110 Replicon: plasmid unnamed1
Accession: NZ_CP039082 Location: 24019..41025 Organism: Piscirickettsia salmonis strain Psal-110 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Psal110_RS16250 () | 19191..19469 | - | 279 | WP_174872555.1 | transposase | - |
| Psal110_RS16255 () | 19438..19620 | - | 183 | Protein_25 | transposase | - |
| Psal110_RS16260 () | 19897..20145 | + | 249 | Protein_26 | DDE-type integrase/transposase/recombinase | - |
| Psal110_RS16265 () | 20243..22126 | - | 1884 | WP_144420843.1 | DUF1561 family protein | - |
| Psal110_RS18690 () | 22125..22277 | + | 153 | WP_169834791.1 | hypothetical protein | - |
| Psal110_RS16270 () | 22867..23844 | + | 978 | WP_036771347.1 | IS5 family transposase | - |
| Psal110_RS16275 () | 24019..24282 | + | 264 | Protein_30 | IS6 family transposase ISPsa2 | Transposase |
| Psal110_RS16280 () | 24647..24862 | + | 216 | Protein_31 | IS6 family transposase ISPsa2 | Transposase |
| Psal110_RS16285 () | 24865..25593 | - | 729 | WP_017375910.1 | IS6 family transposase ISPsa2 | Transposase |
| Psal110_RS16290 () | 25882..26571 | + | 690 | WP_017375909.1 | hypothetical protein | - |
| Psal110_RS16295 () | 26697..27434 | + | 738 | WP_157894753.1 | hypothetical protein | - |
| Psal110_RS16300 () | 27518..27724 | + | 207 | Protein_35 | IS6 family transposase ISPsa2 | Transposase |
| Psal110_RS16305 () | 27775..27942 | - | 168 | Protein_36 | IS6 family transposase ISPsa2 | Transposase |
| Psal110_RS16310 () | 28012..28644 | + | 633 | Protein_37 | IS6 family transposase ISPsa2 | Transposase |
| Psal110_RS16315 () | 28710..29276 | - | 567 | Protein_38 | IS6 family transposase ISPsa2 | Transposase |
| Psal110_RS16325 () | 29562..29726 | - | 165 | Protein_39 | IS6 family transposase ISPsa2 | Transposase |
| Psal110_RS16330 () | 30066..30326 | + | 261 | WP_032126795.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| Psal110_RS16335 () | 30330..30602 | + | 273 | WP_036772441.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| Psal110_RS16340 () | 30678..31406 | + | 729 | WP_017375910.1 | IS6 family transposase ISPsa2 | Transposase |
| Psal110_RS16345 () | 31976..33040 | - | 1065 | WP_174872554.1 | IS91 family transposase ISVsa9 | Transposase |
| Psal110_RS18695 () | 33220..33399 | - | 180 | WP_157894752.1 | hypothetical protein | - |
| Psal110_RS16355 () | 33812..34639 | + | 828 | WP_048876208.1 | IS30 family transposase ISPlu1 | Transposase |
| Psal110_RS16360 () | 34682..35411 | - | 730 | Protein_46 | IS6 family transposase ISPsa2 | Transposase |
| Psal110_RS16365 () | 35493..35963 | - | 471 | WP_036771289.1 | hypothetical protein | - |
| Psal110_RS16370 () | 36613..36789 | - | 177 | Protein_48 | IS30 family transposase ISAs2 | Transposase |
| Psal110_RS16375 () | 36857..37000 | - | 144 | WP_155046633.1 | IS6 family transposase ISPsa2 | Transposase |
| Psal110_RS16380 () | 37262..37873 | - | 612 | Protein_50 | IS6 family transposase ISPsa2 | Transposase |
| Psal110_RS18700 () | 37980..38183 | - | 204 | WP_016212068.1 | hypothetical protein | - |
| Psal110_RS16385 () | 38207..38743 | - | 537 | WP_075275480.1 | DUF1353 domain-containing protein | - |
| Psal110_RS18705 () | 38781..38948 | + | 168 | WP_169834792.1 | hypothetical protein | - |
| Psal110_RS16390 () | 39160..39936 | - | 777 | WP_017375850.1 | N-acetylmuramoyl-L-alanine amidase | - |
| Psal110_RS16395 () | 40297..41025 | + | 729 | WP_036771279.1 | IS6 family transposase ISPsa2 | Transposase |
| Psal110_RS16400 () | 41095..41295 | + | 201 | WP_155046634.1 | transposase zinc-binding domain-containing protein | - |
| Psal110_RS16405 () | 41214..42185 | + | 972 | WP_048876229.1 | IS91 family transposase | - |
| Psal110_RS16410 () | 42599..42967 | + | 369 | WP_027242938.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| Psal110_RS16415 () | 42969..43277 | + | 309 | WP_017375972.1 | helix-turn-helix domain-containing protein | - |
| Psal110_RS16420 () | 43722..43931 | + | 210 | WP_017375841.1 | hypothetical protein | - |
| Psal110_RS16425 () | 44238..44456 | + | 219 | WP_027242937.1 | hypothetical protein | - |
| Psal110_RS16430 () | 44453..44905 | + | 453 | WP_027242936.1 | hypothetical protein | - |
| Psal110_RS16435 () | 45048..45263 | + | 216 | WP_027242935.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|