MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 33555 bp
Accession: NZ_CP039074 Location: 1..33555 Organism: Piscirickettsia salmonis strain Psal-108 Replicon: plasmid unnamed4
Accession: NZ_CP039074 Location: 1..33555 Organism: Piscirickettsia salmonis strain Psal-108 Replicon: plasmid unnamed4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Psal108_RS18015 () | 832..1815 | + | 984 | WP_016211499.1 | ParB/RepB/Spo0J family partition protein | - |
| Psal108_RS18910 () | 2321..2596 | + | 276 | WP_171824216.1 | IS701 family transposase ISAba11 | Transposase |
| Psal108_RS18025 () | 2801..3244 | + | 444 | WP_178099494.1 | IS701 family transposase ISMhu9 | Transposase |
| Psal108_RS18030 () | 3241..4215 | - | 975 | WP_036771330.1 | IS30 family transposase ISPlu1 | Transposase |
| Psal108_RS18915 () | 4329..4685 | + | 357 | WP_075278739.1 | IS701 family transposase ISMhu9 | Transposase |
| Psal108_RS18040 () | 4751..5341 | - | 591 | WP_016212329.1 | site-specific integrase | - |
| Psal108_RS18045 () | 5572..5832 | + | 261 | WP_027242955.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| Psal108_RS18050 () | 5825..6178 | + | 354 | WP_016211078.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| Psal108_RS18055 () | 6355..7329 | + | 975 | WP_069971681.1 | IS30 family transposase ISPlu1 | Transposase |
| Psal108_RS18060 () | 7438..7665 | + | 228 | Protein_10 | hypothetical protein | - |
| Psal108_RS18065 () | 7862..8227 | + | 366 | WP_027242954.1 | hypothetical protein | - |
| Psal108_RS18070 () | 8372..8626 | + | 255 | WP_027242953.1 | type II toxin-antitoxin system HicA family toxin | - |
| Psal108_RS18075 () | 8619..8966 | + | 348 | WP_027242952.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| Psal108_RS18080 () | 9064..10038 | + | 975 | WP_036771330.1 | IS30 family transposase ISPlu1 | Transposase |
| Psal108_RS18920 () | 10270..10410 | - | 141 | WP_162039123.1 | hypothetical protein | - |
| Psal108_RS18085 () | 10664..11530 | + | 867 | WP_027242951.1 | hypothetical protein | - |
| Psal108_RS18090 () | 11743..12126 | + | 384 | WP_027242950.1 | HNH endonuclease | - |
| Psal108_RS18095 () | 12213..12695 | + | 483 | WP_027242949.1 | P27 family phage terminase small subunit | - |
| Psal108_RS18100 () | 12698..12883 | + | 186 | WP_027242948.1 | hypothetical protein | - |
| Psal108_RS18105 () | 12903..13877 | - | 975 | WP_036771330.1 | IS30 family transposase ISPlu1 | Transposase |
| Psal108_RS18110 () | 13974..14366 | + | 393 | WP_075275490.1 | phage major capsid protein | - |
| Psal108_RS18115 () | 14402..14983 | - | 582 | WP_027242946.1 | hypothetical protein | - |
| Psal108_RS18925 () | 15151..15306 | + | 156 | WP_168183246.1 | hypothetical protein | - |
| Psal108_RS18120 () | 15364..16338 | - | 975 | WP_036771330.1 | IS30 family transposase ISPlu1 | Transposase |
| Psal108_RS18125 () | 16382..16627 | + | 246 | WP_171824220.1 | phage head-tail connector protein | - |
| Psal108_RS18130 () | 16801..17409 | + | 609 | Protein_26 | C40 family peptidase | - |
| Psal108_RS18135 () | 17431..17946 | - | 516 | WP_027242945.1 | hypothetical protein | - |
| Psal108_RS18140 () | 18292..18849 | + | 558 | WP_027242944.1 | tail assembly protein | - |
| Psal108_RS18145 () | 18846..19262 | + | 417 | WP_027242943.1 | hypothetical protein | - |
| Psal108_RS18150 () | 19533..21509 | + | 1977 | WP_048876241.1 | host specificity protein J | - |
| Psal108_RS18155 () | 21654..22709 | + | 1056 | WP_062365785.1 | hypothetical protein | - |
| Psal108_RS18160 () | 22709..23386 | + | 678 | WP_027242942.1 | hypothetical protein | - |
| Psal108_RS18165 () | 23406..24380 | - | 975 | WP_036773116.1 | IS30 family transposase ISPlu1 | Transposase |
| Psal108_RS18170 () | 24865..25242 | + | 378 | WP_048876242.1 | hypothetical protein | - |
| Psal108_RS18175 () | 25254..25907 | + | 654 | WP_027242941.1 | DUF4376 domain-containing protein | - |
| Psal108_RS18180 () | 25907..26068 | + | 162 | WP_155046645.1 | hypothetical protein | - |
| Psal108_RS18185 () | 26088..27062 | - | 975 | WP_036771330.1 | IS30 family transposase ISPlu1 | Transposase |
| Psal108_RS18190 () | 27148..27444 | + | 297 | Protein_38 | hypothetical protein | - |
| Psal108_RS18195 () | 27441..27593 | + | 153 | WP_146619546.1 | phosphatase | - |
| Psal108_RS18200 () | 27738..28067 | + | 330 | Protein_40 | hypothetical protein | - |
| Psal108_RS18205 () | 28161..29135 | + | 975 | WP_036771332.1 | IS30 family transposase ISPlu1 | Transposase |
| Psal108_RS18930 () | 29178..29360 | + | 183 | WP_036771335.1 | hypothetical protein | - |
| Psal108_RS18215 () | 29352..29531 | - | 180 | WP_144420851.1 | hypothetical protein | - |
| Psal108_RS18220 () | 29753..30604 | + | 852 | WP_051929859.1 | IS982 family transposase ISPsa1 | Transposase |
| Psal108_RS18225 () | 30702..31571 | - | 870 | WP_027242959.1 | hypothetical protein | - |
| Psal108_RS18230 () | 31786..32016 | - | 231 | WP_027242958.1 | hypothetical protein | - |
| Psal108_RS18235 () | 32115..33164 | - | 1050 | WP_027242957.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|