MGE detailed information
MGE type: IScluster/Tn MGE length: 17276 bp
Accession: NZ_CP038953 Location: 172054..189329 Organism: Piscirickettsia salmonis strain Psal-040 Replicon: plasmid unnamed1
Accession: NZ_CP038953 Location: 172054..189329 Organism: Piscirickettsia salmonis strain Psal-040 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Psal040_RS17345 () | 168042..168329 | + | 288 | WP_016212456.1 | type II toxin-antitoxin system HigB family toxin | - |
| Psal040_RS17350 () | 168326..168727 | + | 402 | WP_036779532.1 | helix-turn-helix domain-containing protein | - |
| Psal040_RS17355 () | 168737..170923 | - | 2187 | WP_075273881.1 | ATP-dependent RecD-like DNA helicase | - |
| Psal040_RS17360 () | 171044..171277 | - | 234 | WP_016212404.1 | hypothetical protein | - |
| Psal040_RS17365 () | 171333..171551 | - | 219 | WP_016212407.1 | transposase | - |
| Psal040_RS17370 () | 172054..172788 | + | 735 | WP_075273857.1 | IS6 family transposase ISPsa2 | Transposase |
| Psal040_RS17375 () | 172942..173673 | - | 732 | WP_016212311.1 | hypothetical protein | - |
| Psal040_RS17385 () | 173794..175377 | - | 1584 | WP_052047129.1 | protein kinase | - |
| Psal040_RS17390 () | 175660..176388 | - | 729 | WP_075274745.1 | IS6 family transposase ISPsa2 | Transposase |
| Psal040_RS17395 () | 176456..176896 | - | 441 | Protein_223 | tyrosine-type recombinase/integrase | - |
| Psal040_RS17400 () | 177101..177343 | + | 243 | WP_016212365.1 | antidote-toxin recognition MazE family protein | Antitoxin Detail |
| Psal040_RS17405 () | 177345..177671 | + | 327 | WP_036781349.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| Psal040_RS17410 () | 177787..178515 | + | 729 | WP_054300202.1 | IS6 family transposase ISPsa2 | Transposase |
| Psal040_RS17415 () | 178985..179368 | + | 384 | WP_016212152.1 | hypothetical protein | - |
| Psal040_RS17420 () | 179675..180052 | - | 378 | WP_016212154.1 | IS3 family transposase ISSde6 | Transposase |
| Psal040_RS17425 () | 180217..180549 | - | 333 | WP_155047283.1 | IS91 family transposase ISEc37 | Transposase |
| Psal040_RS17435 () | 180738..181517 | - | 780 | WP_081377351.1 | IS91 family transposase ISVa3 | Transposase |
| Psal040_RS17440 () | 181618..181875 | - | 258 | Protein_231 | IS6 family transposase ISPsa2 | Transposase |
| Psal040_RS18720 () | 182164..182283 | - | 120 | Protein_232 | IS6 family transposase ISPsa2 | Transposase |
| Psal040_RS17450 () | 182619..183314 | + | 696 | WP_016212019.1 | IS6 family transposase ISSba18 | Transposase |
| Psal040_RS17455 () | 183783..184058 | - | 276 | WP_105962690.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| Psal040_RS17460 () | 184055..184300 | - | 246 | WP_047927838.1 | hypothetical protein | - |
| Psal040_RS17465 () | 184330..184557 | - | 228 | WP_155047016.1 | hypothetical protein | - |
| Psal040_RS17470 () | 184961..185374 | - | 414 | WP_016212014.1 | DUF2190 family protein | - |
| Psal040_RS17475 () | 185472..186200 | - | 729 | WP_054300202.1 | IS6 family transposase ISPsa2 | Transposase |
| Psal040_RS17480 () | 186267..187420 | + | 1154 | WP_105962623.1 | IS3 family transposase ISMasp3 | Transposase |
| Psal040_RS17485 () | 188049..189077 | + | 1029 | WP_155047284.1 | hypothetical protein | - |
| Psal040_RS17490 () | 189198..189326 | + | 129 | Protein_241 | IS6 family transposase ISPsa2 | Transposase |
| Psal040_RS17500 () | 190470..191597 | - | 1128 | WP_075273826.1 | hypothetical protein | - |
| Psal040_RS17505 () | 191818..191964 | + | 147 | WP_155047013.1 | hypothetical protein | - |
| Psal040_RS17510 () | 192294..193109 | + | 816 | WP_081377350.1 | transposase | - |
| Psal040_RS17515 () | 193355..193945 | + | 591 | WP_036780064.1 | site-specific integrase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|