MGE detailed information
MGE type: IScluster/Tn MGE length: 33237 bp
Accession: NZ_CP038924 Location: 30827..64063 Organism: Piscirickettsia salmonis strain Psal-011 Replicon: plasmid unnamed1
Accession: NZ_CP038924 Location: 30827..64063 Organism: Piscirickettsia salmonis strain Psal-011 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Psal011_RS16560 () | 26011..26325 | - | 315 | WP_016212150.1 | hypothetical protein | - |
| Psal011_RS16565 () | 26382..27431 | - | 1050 | WP_033923686.1 | transposase | - |
| Psal011_RS16570 () | 27540..28580 | - | 1041 | WP_016211885.1 | DNA-binding protein | - |
| Psal011_RS16575 () | 28594..29223 | - | 630 | WP_129556706.1 | hypothetical protein | - |
| Psal011_RS16580 () | 29314..29613 | - | 300 | WP_016211884.1 | nucleotidyltransferase domain-containing protein | - |
| Psal011_RS16585 () | 29610..30038 | - | 429 | WP_016211886.1 | nucleotidyltransferase substrate binding protein | - |
| Psal011_RS16590 () | 30827..31555 | - | 729 | WP_054300202.1 | IS6 family transposase ISPsa2 | Transposase |
| Psal011_RS16595 () | 31800..32708 | + | 909 | WP_032126832.1 | Chemotaxis protein CheV | VF |
| Psal011_RS16600 () | 32819..33547 | - | 729 | WP_054300202.1 | IS6 family transposase ISPsa2 | Transposase |
| Psal011_RS16605 () | 33659..33826 | - | 168 | WP_168183278.1 | hypothetical protein | - |
| Psal011_RS16610 () | 33777..34691 | + | 915 | Protein_47 | IS30 family transposase IS1655 | Transposase |
| Psal011_RS16615 () | 34740..35468 | + | 729 | WP_054300202.1 | IS6 family transposase ISPsa2 | Transposase |
| Psal011_RS16620 () | 35672..38248 | + | 2577 | WP_016211890.1 | hypothetical protein | - |
| Psal011_RS16625 () | 38654..39628 | + | 975 | WP_075274822.1 | IS30 family transposase ISPlu1 | Transposase |
| Psal011_RS16630 () | 39671..39805 | - | 135 | Protein_51 | IS3 family transposase | - |
| Psal011_RS16635 () | 39829..40557 | - | 729 | WP_075274931.1 | IS6 family transposase ISPsa2 | Transposase |
| Psal011_RS16640 () | 40627..40971 | + | 345 | Protein_53 | IS481 family transposase ISWpi2 | Transposase |
| Psal011_RS16645 () | 41001..42062 | - | 1062 | WP_016212137.1 | hypothetical protein | - |
| Psal011_RS16650 () | 42138..42383 | - | 246 | WP_016212139.1 | hypothetical protein | - |
| Psal011_RS16655 () | 42355..42969 | - | 615 | WP_051307371.1 | hypothetical protein | - |
| Psal011_RS16660 () | 43176..43694 | - | 519 | Protein_57 | IS6 family transposase ISPsa2 | Transposase |
| Psal011_RS16665 () | 43787..44761 | + | 975 | WP_075274955.1 | IS30 family transposase ISPlu1 | Transposase |
| Psal011_RS16670 () | 44792..45010 | - | 219 | Protein_59 | IS6 family transposase ISPsa2 | Transposase |
| Psal011_RS16675 () | 45121..46140 | - | 1020 | WP_129556707.1 | hypothetical protein | - |
| Psal011_RS16685 () | 48067..48339 | + | 273 | WP_032126239.1 | IS3 family transposase ISWsu1 | Transposase |
| Psal011_RS16690 () | 48351..49187 | + | 837 | WP_033923779.1 | IS3 family transposase IS1351 | Transposase |
| Psal011_RS16695 () | 49220..49951 | + | 732 | WP_075275144.1 | IS6 family transposase ISPsa2 | Transposase |
| Psal011_RS16700 () | 50049..50462 | + | 414 | WP_016212014.1 | DUF2190 family protein | - |
| Psal011_RS16705 () | 50757..51155 | + | 399 | WP_016212017.1 | hypothetical protein | - |
| Psal011_RS16710 () | 51185..51430 | + | 246 | WP_047927838.1 | hypothetical protein | - |
| Psal011_RS16715 () | 51427..51726 | + | 300 | WP_016212018.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| Psal011_RS16720 () | 51883..52578 | - | 696 | WP_016212019.1 | IS6 family transposase ISSba18 | Transposase |
| Psal011_RS16725 () | 52914..53291 | + | 378 | Protein_70 | IS6 family transposase ISPsa2 | Transposase |
| Psal011_RS16730 () | 53392..54171 | + | 780 | WP_081377351.1 | IS91 family transposase ISVa3 | Transposase |
| Psal011_RS16740 () | 54360..54692 | + | 333 | WP_032126739.1 | IS91 family transposase ISEc37 | Transposase |
| Psal011_RS16745 () | 54857..55234 | + | 378 | WP_016212154.1 | IS3 family transposase ISSde6 | Transposase |
| Psal011_RS16750 () | 55541..55924 | - | 384 | WP_016212152.1 | hypothetical protein | - |
| Psal011_RS16755 () | 56394..57122 | - | 729 | WP_054300202.1 | IS6 family transposase ISPsa2 | Transposase |
| Psal011_RS16760 () | 57238..57573 | - | 336 | WP_129556708.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| Psal011_RS16765 () | 57566..57808 | - | 243 | WP_016212365.1 | antidote-toxin recognition MazE family protein | Antitoxin Detail |
| Psal011_RS16770 () | 58017..58991 | + | 975 | WP_054300271.1 | IS30 family transposase ISPlu1 | Transposase |
| Psal011_RS16775 () | 59119..59559 | + | 441 | Protein_79 | tyrosine-type recombinase/integrase | - |
| Psal011_RS16780 () | 59627..60355 | + | 729 | WP_075275142.1 | IS6 family transposase ISPsa2 | Transposase |
| Psal011_RS16785 () | 60638..62323 | + | 1686 | WP_075275141.1 | protein kinase | - |
| Psal011_RS18545 () | 62444..63175 | + | 732 | WP_016212311.1 | hypothetical protein | - |
| Psal011_RS16800 () | 63329..64063 | - | 735 | WP_075275140.1 | IS6 family transposase ISPsa2 | Transposase |
| Psal011_RS16805 () | 64548..64703 | + | 156 | Protein_84 | transposase | - |
| Psal011_RS16810 () | 64690..64920 | + | 231 | WP_075275139.1 | hypothetical protein | - |
| Psal011_RS16815 () | 65261..65479 | + | 219 | WP_016212407.1 | transposase | - |
| Psal011_RS16820 () | 65535..65768 | + | 234 | WP_016212404.1 | hypothetical protein | - |
| Psal011_RS16825 () | 65889..66332 | + | 444 | WP_032126756.1 | hypothetical protein | - |
| Psal011_RS16830 () | 66477..66785 | + | 309 | WP_075275138.1 | hypothetical protein | - |
| Psal011_RS16835 () | 66990..68651 | + | 1662 | WP_052047124.1 | AAA family ATPase | - |
| Psal011_RS16840 () | 68661..69062 | - | 402 | WP_016212457.1 | helix-turn-helix domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|