MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 57431 bp
Accession: NZ_CP038920 Location: 1..57431 Organism: Piscirickettsia salmonis strain Psal-010b Replicon: plasmid unnamed2
Accession: NZ_CP038920 Location: 1..57431 Organism: Piscirickettsia salmonis strain Psal-010b Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Psal010b_RS17355 () | 1..861 | + | 861 | WP_047927060.1 | ParA family protein | - |
| Psal010b_RS17360 () | 858..1706 | + | 849 | WP_036774869.1 | ParB/RepB/Spo0J family partition protein | - |
| Psal010b_RS17365 () | 2150..3445 | + | 1296 | WP_027242605.1 | glutamate-1-semialdehyde 2,1-aminomutase | - |
| Psal010b_RS17370 () | 3740..4480 | + | 741 | WP_036775038.1 | ester cyclase | - |
| Psal010b_RS17375 () | 4466..5137 | - | 672 | WP_036775037.1 | HAD family hydrolase | - |
| Psal010b_RS17380 () | 5143..5928 | - | 786 | WP_053063426.1 | class I SAM-dependent methyltransferase | - |
| Psal010b_RS17385 () | 6048..6404 | - | 357 | WP_047927058.1 | hypothetical protein | - |
| Psal010b_RS17390 () | 6483..6761 | + | 279 | WP_036774994.1 | hypothetical protein | - |
| Psal010b_RS17395 () | 6967..7221 | + | 255 | WP_144420828.1 | hypothetical protein | - |
| Psal010b_RS17400 () | 7419..7736 | + | 318 | WP_052106244.1 | hypothetical protein | - |
| Psal010b_RS17405 () | 7752..8042 | + | 291 | WP_036775000.1 | type IV conjugative transfer system protein TraL | - |
| Psal010b_RS17410 () | 8050..8619 | + | 570 | WP_047927056.1 | hypothetical protein | - |
| Psal010b_RS17415 () | 8612..9316 | + | 705 | WP_051929536.1 | type-F conjugative transfer system secretin TraK | - |
| Psal010b_RS17420 () | 9326..10795 | + | 1470 | WP_051929537.1 | TraB/VirB10 family protein | - |
| Psal010b_RS17425 () | 10798..11244 | + | 447 | WP_065653727.1 | type IV conjugative transfer system lipoprotein TraV | - |
| Psal010b_RS17430 () | 11257..13836 | + | 2580 | WP_036774456.1 | type IV secretion system protein TraC | - |
| Psal010b_RS17435 () | 13823..14170 | + | 348 | WP_036774457.1 | TrbI F-type domain-containing protein | - |
| Psal010b_RS17440 () | 14163..14780 | + | 618 | WP_036773375.1 | type-F conjugative transfer system protein TraW | - |
| Psal010b_RS17445 () | 14885..15874 | + | 990 | WP_036773373.1 | conjugal transfer pilus assembly protein TraU | - |
| Psal010b_RS17450 () | 15883..16548 | + | 666 | WP_036773372.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| Psal010b_RS17455 () | 16545..18452 | + | 1908 | WP_155601406.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| Psal010b_RS17460 () | 18449..19261 | + | 813 | WP_036773367.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| Psal010b_RS17465 () | 19258..19749 | + | 492 | WP_027242554.1 | conjugal transfer protein TraF | - |
| Psal010b_RS17470 () | 19742..21124 | + | 1383 | WP_027242553.1 | conjugal transfer protein TraH | - |
| Psal010b_RS17475 () | 21147..23915 | + | 2769 | WP_196214291.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| Psal010b_RS17480 () | 23932..24249 | - | 318 | WP_027242551.1 | hypothetical protein | - |
| Psal010b_RS17485 () | 24332..25075 | + | 744 | WP_027242550.1 | complement resistance protein TraT | - |
| Psal010b_RS17490 () | 25114..25434 | + | 321 | WP_027242549.1 | hypothetical protein | - |
| Psal010b_RS17495 () | 25445..27442 | + | 1998 | WP_052106227.1 | type IV conjugative transfer system coupling protein TraD | - |
| Psal010b_RS17500 () | 27442..28194 | + | 753 | WP_027242548.1 | DsbA family protein | - |
| Psal010b_RS17505 () | 28206..28412 | + | 207 | WP_027242547.1 | hypothetical protein | - |
| Psal010b_RS17510 () | 28481..34351 | + | 5871 | WP_075275450.1 | Multifunctional conjugation protein TraI | Relaxase |
| Psal010b_RS17515 () | 34346..34675 | - | 330 | WP_036774904.1 | hypothetical protein | - |
| Psal010b_RS17520 () | 34666..35109 | - | 444 | WP_036774901.1 | hypothetical protein | - |
| Psal010b_RS17525 () | 35695..35988 | + | 294 | WP_036774899.1 | hypothetical protein | - |
| Psal010b_RS17530 () | 36052..36840 | - | 789 | WP_047927050.1 | hypothetical protein | - |
| Psal010b_RS17535 () | 36900..37463 | - | 564 | WP_036816706.1 | DnaJ domain-containing protein | - |
| Psal010b_RS17540 () | 37532..37903 | - | 372 | WP_047927049.1 | hypothetical protein | - |
| Psal010b_RS17545 () | 38330..38584 | + | 255 | WP_144420829.1 | hypothetical protein | - |
| Psal010b_RS17550 () | 38761..40947 | + | 2187 | WP_027242581.1 | ATP-dependent RecD-like DNA helicase | - |
| Psal010b_RS17555 () | 40957..41358 | - | 402 | WP_027242582.1 | helix-turn-helix domain-containing protein | - |
| Psal010b_RS17560 () | 41355..41666 | - | 312 | WP_027242583.1 | type II toxin-antitoxin system HigB family toxin | - |
| Psal010b_RS17565 () | 42023..42337 | - | 315 | WP_036774182.1 | WGR domain-containing protein | - |
| Psal010b_RS17570 () | 42434..44296 | + | 1863 | WP_027242576.1 | RecX family transcriptional regulator | - |
| Psal010b_RS17575 () | 44324..44815 | + | 492 | WP_155046642.1 | hypothetical protein | - |
| Psal010b_RS17580 () | 44826..45053 | - | 228 | Protein_46 | transposase | - |
| Psal010b_RS17585 () | 45049..45201 | + | 153 | WP_155046643.1 | IS30 family transposase IS4351 | Transposase |
| Psal010b_RS17590 () | 45249..46256 | - | 1008 | WP_036774189.1 | IS3 family transposase ISGur10 | Transposase |
| Psal010b_RS17595 () | 46256..46513 | - | 258 | WP_098082828.1 | IS3 family transposase ISGur10 | Transposase |
| Psal010b_RS17600 () | 46746..47663 | + | 918 | Protein_50 | IS30 family transposase IS1655 | Transposase |
| Psal010b_RS17605 () | 47780..48244 | + | 465 | WP_036774631.1 | hypothetical protein | - |
| Psal010b_RS17610 () | 48303..48443 | - | 141 | Protein_52 | helix-turn-helix domain-containing protein | - |
| Psal010b_RS17615 () | 48607..48753 | + | 147 | WP_157894761.1 | transposase zinc-binding domain-containing protein | - |
| Psal010b_RS17620 () | 49470..49610 | - | 141 | Protein_54 | IS30 family transposase ISLga1 | Transposase |
| Psal010b_RS17625 () | 49783..50001 | + | 219 | WP_155046644.1 | hypothetical protein | - |
| Psal010b_RS17630 () | 50327..50599 | - | 273 | WP_016211910.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| Psal010b_RS17635 () | 50603..50863 | - | 261 | WP_032126795.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| Psal010b_RS17640 () | 51136..51726 | + | 591 | WP_027242600.1 | site-specific integrase | - |
| Psal010b_RS17645 () | 51754..53157 | - | 1404 | WP_048876031.1 | IS4 family transposase ISArch10 | Transposase |
| Psal010b_RS17650 () | 53861..54820 | - | 960 | Protein_60 | IS982 family transposase | - |
| Psal010b_RS17655 () | 55254..56378 | - | 1125 | WP_047927063.1 | hypothetical protein | - |
| Psal010b_RS17660 () | 56378..56704 | - | 327 | WP_047927062.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|