MGE detailed information
MGE type: IScluster/Tn MGE length: 30589 bp
Accession: NZ_CP038905 Location: 55895..86483 Organism: Piscirickettsia salmonis strain Psal-008 Replicon: plasmid unnamed1
Accession: NZ_CP038905 Location: 55895..86483 Organism: Piscirickettsia salmonis strain Psal-008 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Psal008_RS16530 () | 51657..51872 | - | 216 | WP_027242935.1 | hypothetical protein | - |
| Psal008_RS16535 () | 52015..52467 | - | 453 | WP_027242936.1 | hypothetical protein | - |
| Psal008_RS16540 () | 52464..52682 | - | 219 | WP_027242937.1 | hypothetical protein | - |
| Psal008_RS16545 () | 52989..53198 | - | 210 | WP_017375841.1 | hypothetical protein | - |
| Psal008_RS16550 () | 53643..53951 | - | 309 | WP_017375972.1 | helix-turn-helix domain-containing protein | - |
| Psal008_RS16555 () | 53953..54321 | - | 369 | WP_027242938.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| Psal008_RS16560 () | 54735..55706 | - | 972 | WP_048876229.1 | IS91 family transposase | - |
| Psal008_RS16565 () | 55625..55819 | - | 195 | WP_080963638.1 | transposase zinc-binding domain-containing protein | - |
| Psal008_RS16570 () | 55895..56623 | - | 729 | WP_036771279.1 | IS6 family transposase ISPsa2 | Transposase |
| Psal008_RS16575 () | 56984..57760 | + | 777 | WP_017375850.1 | N-acetylmuramoyl-L-alanine amidase | - |
| Psal008_RS18405 () | 57972..58139 | - | 168 | WP_169834792.1 | hypothetical protein | - |
| Psal008_RS16580 () | 58114..58713 | + | 600 | WP_027242940.1 | DUF1353 domain-containing protein | - |
| Psal008_RS16585 () | 59047..59658 | + | 612 | Protein_77 | IS6 family transposase ISPsa2 | Transposase |
| Psal008_RS16590 () | 59920..60063 | + | 144 | WP_155046633.1 | IS6 family transposase ISPsa2 | Transposase |
| Psal008_RS16595 () | 60131..60307 | + | 177 | Protein_79 | IS30 family transposase ISAs2 | Transposase |
| Psal008_RS16600 () | 60957..61427 | + | 471 | WP_036771289.1 | hypothetical protein | - |
| Psal008_RS16605 () | 61509..62238 | + | 730 | Protein_81 | IS6 family transposase ISPsa2 | Transposase |
| Psal008_RS16610 () | 62281..63108 | - | 828 | WP_048876208.1 | IS30 family transposase ISPlu1 | Transposase |
| Psal008_RS18410 () | 63521..63700 | + | 180 | WP_157894752.1 | hypothetical protein | - |
| Psal008_RS16620 () | 63880..64944 | + | 1065 | WP_174872554.1 | IS91 family transposase ISVsa9 | Transposase |
| Psal008_RS16625 () | 65514..66242 | - | 729 | WP_017375910.1 | IS6 family transposase ISPsa2 | Transposase |
| Psal008_RS16630 () | 66318..66590 | - | 273 | WP_036772441.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| Psal008_RS16635 () | 66594..66854 | - | 261 | WP_032126795.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| Psal008_RS16640 () | 67194..67358 | + | 165 | Protein_88 | IS6 family transposase ISPsa2 | Transposase |
| Psal008_RS16645 () | 67644..68210 | + | 567 | Protein_89 | IS6 family transposase ISPsa2 | Transposase |
| Psal008_RS16650 () | 68213..68644 | - | 432 | Protein_90 | IS6 family transposase ISPsa2 | Transposase |
| Psal008_RS16655 () | 69033..69296 | - | 264 | Protein_91 | IS6 family transposase ISPsa2 | Transposase |
| Psal008_RS16660 () | 69376..70503 | - | 1128 | WP_036772450.1 | hypothetical protein | - |
| Psal008_RS16665 () | 71030..71929 | + | 900 | Protein_93 | IS30 family transposase ISPlu1 | Transposase |
| Psal008_RS16670 () | 71965..72126 | - | 162 | Protein_94 | IS6 family transposase ISSod8 | Transposase |
| Psal008_RS16675 () | 72317..73339 | + | 1023 | WP_027243215.1 | hypothetical protein | - |
| Psal008_RS16680 () | 73412..73753 | + | 342 | Protein_96 | IS6 family transposase ISPsa2 | Transposase |
| Psal008_RS16685 () | 73822..74550 | - | 729 | WP_036774350.1 | IS6 family transposase ISPsa2 | Transposase |
| Psal008_RS16690 () | 74620..75225 | + | 606 | Protein_98 | IS982 family transposase ISPsa1 | Transposase |
| Psal008_RS16695 () | 75508..75678 | + | 171 | Protein_99 | IS982 family transposase | - |
| Psal008_RS16700 () | 75790..76323 | + | 534 | WP_048876194.1 | phage portal protein | - |
| Psal008_RS16705 () | 76504..76845 | + | 342 | WP_080963665.1 | phage portal protein | - |
| Psal008_RS16710 () | 77026..77292 | + | 267 | WP_080963664.1 | phage portal protein | - |
| Psal008_RS16715 () | 77365..79230 | - | 1866 | WP_027243206.1 | RecX family transcriptional regulator | - |
| Psal008_RS16720 () | 79398..79682 | + | 285 | WP_047927778.1 | IS3 family transposase IS1302 | Transposase |
| Psal008_RS16725 () | 79741..79962 | + | 222 | Protein_105 | IS6 family transposase ISSpu17 | Transposase |
| Psal008_RS16730 () | 80026..80754 | - | 729 | WP_017375910.1 | IS6 family transposase ISPsa2 | Transposase |
| Psal008_RS16735 () | 80836..81387 | - | 552 | WP_027243207.1 | hypothetical protein | - |
| Psal008_RS16740 () | 81667..82056 | - | 390 | Protein_108 | IS6 family transposase ISPsa2 | Transposase |
| Psal008_RS16755 () | 83281..83634 | - | 354 | Protein_110 | IS6 family transposase ISPsa2 | Transposase |
| Psal008_RS16760 () | 83839..84267 | + | 429 | WP_048876191.1 | HI0074 family nucleotidyltransferase substrate-binding subunit | - |
| Psal008_RS16765 () | 84260..84589 | + | 330 | WP_048876190.1 | nucleotidyltransferase domain-containing protein | - |
| Psal008_RS16770 () | 84619..85347 | + | 729 | WP_017377694.1 | IS6 family transposase ISPsa2 | Transposase |
| Psal008_RS16775 () | 85359..85508 | - | 150 | WP_017375663.1 | IS3 family transposase ISPin3 | Transposase |
| Psal008_RS16780 () | 85755..86483 | - | 729 | WP_017377694.1 | IS6 family transposase ISPsa2 | Transposase |
| Psal008_RS16785 () | 86554..86988 | + | 435 | Protein_116 | IS30 family transposase | - |
| Psal008_RS16790 () | 87024..87335 | - | 312 | Protein_117 | helix-turn-helix domain-containing protein | - |
| Psal008_RS16795 () | 87861..88823 | - | 963 | WP_036774388.1 | tyrosine-type recombinase/integrase | - |
| Psal008_RS16800 () | 88847..89176 | - | 330 | WP_027242592.1 | hypothetical protein | - |
| Psal008_RS16805 () | 89243..90283 | - | 1041 | WP_036774385.1 | DNA-binding protein | - |
| Psal008_RS16810 () | 90297..90488 | - | 192 | WP_144420833.1 | hypothetical protein | - |
| Psal008_RS16815 () | 90693..91262 | - | 570 | WP_036774378.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|