MGE detailed information
MGE type: IScluster/Tn MGE length: 31637 bp
Accession: NZ_CP038899 Location: 10357..41993 Organism: Piscirickettsia salmonis strain Psal-006b Replicon: plasmid unnamed1
Accession: NZ_CP038899 Location: 10357..41993 Organism: Piscirickettsia salmonis strain Psal-006b Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Psal006b_RS16230 () | 6057..6206 | + | 150 | WP_162287778.1 | hypothetical protein | - |
| Psal006b_RS16235 () | 6199..6537 | - | 339 | WP_027243184.1 | hypothetical protein | - |
| Psal006b_RS16240 () | 6551..6955 | - | 405 | WP_052133264.1 | hypothetical protein | - |
| Psal006b_RS16245 () | 7000..7218 | - | 219 | WP_017375840.1 | hypothetical protein | - |
| Psal006b_RS16250 () | 8205..9299 | + | 1095 | WP_157894754.1 | replication initiation protein | - |
| Psal006b_RS16255 () | 9641..9886 | + | 246 | WP_017377655.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| Psal006b_RS16260 () | 9883..10269 | + | 387 | WP_017377656.1 | type II toxin-antitoxin system VapC family toxin | - |
| Psal006b_RS16265 () | 10357..11085 | + | 729 | WP_036772434.1 | IS6 family transposase ISPsa2 | Transposase |
| Psal006b_RS16270 () | 11064..11684 | + | 621 | WP_080963659.1 | ABC transporter permease | - |
| Psal006b_RS16275 () | 12030..12716 | + | 687 | WP_017377658.1 | Fic family protein | - |
| Psal006b_RS16280 () | 12720..12845 | + | 126 | Protein_18 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| Psal006b_RS16285 () | 12911..13636 | - | 726 | Protein_19 | IS6 family transposase ISPsa2 | Transposase |
| Psal006b_RS16290 () | 13666..14028 | - | 363 | WP_082304501.1 | hypothetical protein | - |
| Psal006b_RS16295 () | 14031..15770 | - | 1740 | WP_016212146.1 | Cardiolipin synthase A | VF |
| Psal006b_RS16300 () | 16172..16324 | + | 153 | WP_155046629.1 | hypothetical protein | - |
| Psal006b_RS16305 () | 16352..17035 | - | 684 | WP_051929558.1 | IS5 family transposase ISLlo3 | Transposase |
| Psal006b_RS16310 () | 17117..18094 | + | 978 | WP_036771347.1 | IS5 family transposase ISLlo3 | Transposase |
| Psal006b_RS16315 () | 18170..18340 | + | 171 | WP_081000019.1 | integrase core domain-containing protein | - |
| Psal006b_RS16320 () | 18381..19109 | + | 729 | WP_048876210.1 | IS6 family transposase ISPsa2 | Transposase |
| Psal006b_RS16325 () | 19655..19921 | - | 267 | WP_036771293.1 | IS3 family transposase ISLpn8 | Transposase |
| Psal006b_RS16330 () | 20217..21989 | - | 1773 | WP_171824214.1 | DUF1561 family protein | - |
| Psal006b_RS16335 () | 22195..22317 | - | 123 | Protein_29 | IS6 family transposase ISSba18 | Transposase |
| Psal006b_RS16340 () | 22537..23265 | + | 729 | WP_017377694.1 | IS6 family transposase ISPsa2 | Transposase |
| Psal006b_RS16345 () | 23363..23485 | + | 123 | WP_082884401.1 | IS3 family transposase | - |
| Psal006b_RS16350 () | 23902..24066 | + | 165 | WP_155046630.1 | hypothetical protein | - |
| Psal006b_RS16355 () | 24087..25373 | + | 1287 | WP_017375754.1 | hypothetical protein | - |
| Psal006b_RS16360 () | 25556..26284 | + | 729 | WP_036771359.1 | IS6 family transposase ISPsa2 | Transposase |
| Psal006b_RS16365 () | 26412..26882 | - | 471 | WP_155062845.1 | IS5 family transposase ISLlo3 | Transposase |
| Psal006b_RS16370 () | 27027..27677 | - | 651 | WP_155062847.1 | IS5 family transposase ISLlo3 | Transposase |
| Psal006b_RS16375 () | 27752..28402 | + | 651 | WP_155046631.1 | hypothetical protein | - |
| Psal006b_RS16380 () | 28486..28692 | + | 207 | Protein_38 | IS6 family transposase ISPsa2 | Transposase |
| Psal006b_RS16385 () | 28743..28910 | - | 168 | Protein_39 | IS6 family transposase ISPsa2 | Transposase |
| Psal006b_RS16390 () | 28980..29612 | + | 633 | Protein_40 | IS6 family transposase ISPsa2 | Transposase |
| Psal006b_RS16395 () | 29678..30244 | - | 567 | Protein_41 | IS6 family transposase ISPsa2 | Transposase |
| Psal006b_RS16405 () | 30530..30694 | - | 165 | Protein_42 | IS6 family transposase ISPsa2 | Transposase |
| Psal006b_RS16410 () | 31034..31294 | + | 261 | WP_032126795.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| Psal006b_RS16415 () | 31298..31570 | + | 273 | WP_036772441.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| Psal006b_RS16420 () | 31646..32374 | + | 729 | WP_017375910.1 | IS6 family transposase ISPsa2 | Transposase |
| Psal006b_RS16425 () | 32944..34008 | - | 1065 | WP_174872554.1 | IS91 family transposase ISVsa9 | Transposase |
| Psal006b_RS19180 () | 34188..34367 | - | 180 | WP_157894752.1 | hypothetical protein | - |
| Psal006b_RS16435 () | 34780..35607 | + | 828 | WP_048876208.1 | IS30 family transposase ISPlu1 | Transposase |
| Psal006b_RS16440 () | 35650..36379 | - | 730 | Protein_49 | IS6 family transposase ISPsa2 | Transposase |
| Psal006b_RS16445 () | 36461..36931 | - | 471 | WP_036771289.1 | hypothetical protein | - |
| Psal006b_RS16450 () | 37581..37757 | - | 177 | Protein_51 | IS30 family transposase ISAs2 | Transposase |
| Psal006b_RS16455 () | 37825..37968 | - | 144 | WP_155046633.1 | IS6 family transposase ISPsa2 | Transposase |
| Psal006b_RS16460 () | 38230..38841 | - | 612 | Protein_53 | IS6 family transposase ISPsa2 | Transposase |
| Psal006b_RS16465 () | 39175..39711 | - | 537 | WP_075275480.1 | DUF1353 domain-containing protein | - |
| Psal006b_RS19185 () | 39749..39916 | + | 168 | WP_169834792.1 | hypothetical protein | - |
| Psal006b_RS16470 () | 40128..40904 | - | 777 | WP_017375850.1 | N-acetylmuramoyl-L-alanine amidase | - |
| Psal006b_RS16475 () | 41265..41993 | + | 729 | WP_036771279.1 | IS6 family transposase ISPsa2 | Transposase |
| Psal006b_RS16480 () | 42063..42263 | + | 201 | WP_155046634.1 | transposase zinc-binding domain-containing protein | - |
| Psal006b_RS16485 () | 42182..43153 | + | 972 | WP_048876229.1 | IS91 family transposase | - |
| Psal006b_RS16490 () | 43567..43935 | + | 369 | WP_027242938.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| Psal006b_RS16495 () | 43937..44245 | + | 309 | WP_017375972.1 | helix-turn-helix domain-containing protein | - |
| Psal006b_RS16500 () | 44690..44899 | + | 210 | WP_017375841.1 | hypothetical protein | - |
| Psal006b_RS16505 () | 45206..45424 | + | 219 | WP_027242937.1 | hypothetical protein | - |
| Psal006b_RS16510 () | 45421..45873 | + | 453 | WP_027242936.1 | hypothetical protein | - |
| Psal006b_RS16515 () | 46001..46231 | + | 231 | WP_144420845.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|