MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 57410 bp
Accession: NZ_CP038895 Location: 1..57410 Organism: Piscirickettsia salmonis strain Psal-006a Replicon: plasmid unnamed2
Accession: NZ_CP038895 Location: 1..57410 Organism: Piscirickettsia salmonis strain Psal-006a Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Psal006a_RS17480 () | 1..786 | + | 786 | WP_016211925.1 | ParA family protein | - |
| Psal006a_RS17485 () | 779..1219 | + | 441 | WP_016211928.1 | hypothetical protein | - |
| Psal006a_RS17490 () | 1770..2033 | + | 264 | WP_032126138.1 | RNA-binding protein | - |
| Psal006a_RS17495 () | 2808..3857 | + | 1050 | WP_032126137.1 | hypothetical protein | - |
| Psal006a_RS17500 () | 3921..4661 | + | 741 | WP_016212188.1 | class I SAM-dependent methyltransferase | - |
| Psal006a_RS17505 () | 4839..5111 | + | 273 | WP_155047301.1 | hypothetical protein | - |
| Psal006a_RS18635 () | 5412..5786 | + | 375 | WP_196214179.1 | IS630 family transposase ISTer1 | Transposase |
| Psal006a_RS17515 () | 5732..6307 | + | 576 | WP_075273298.1 | IS630 family transposase ISAcma25 | Transposase |
| Psal006a_RS17520 () | 6373..6918 | - | 546 | WP_032126136.1 | hypothetical protein | - |
| Psal006a_RS17525 () | 6972..7795 | - | 824 | Protein_9 | IS30 family transposase ISPlu1 | Transposase |
| Psal006a_RS17530 () | 7952..8923 | - | 972 | WP_033923677.1 | IS91 family transposase ISVsa9 | Transposase |
| Psal006a_RS17535 () | 8848..9147 | - | 300 | WP_075274768.1 | transposase zinc-binding domain-containing protein | - |
| Psal006a_RS17540 () | 9253..9405 | - | 153 | Protein_12 | helix-turn-helix domain-containing protein | - |
| Psal006a_RS17545 () | 9631..10710 | - | 1080 | WP_155047302.1 | hypothetical protein | - |
| Psal006a_RS17550 () | 11241..11705 | - | 465 | WP_016212274.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| Psal006a_RS17555 () | 11716..11910 | - | 195 | WP_032126154.1 | type II toxin-antitoxin system HicA family toxin | - |
| Psal006a_RS17560 () | 12126..12716 | + | 591 | WP_032126152.1 | site-specific integrase | - |
| Psal006a_RS17565 () | 12780..13121 | + | 342 | WP_081007075.1 | MBL fold metallo-hydrolase | - |
| Psal006a_RS17570 () | 13467..14468 | - | 1002 | WP_155047303.1 | IS30 family transposase ISPlu1 | Transposase |
| Psal006a_RS17575 () | 14840..16870 | + | 2031 | WP_168183247.1 | S9 family peptidase | - |
| Psal006a_RS17580 () | 16900..17628 | + | 729 | WP_017375910.1 | IS6 family transposase ISPsa2 | Transposase |
| Psal006a_RS17585 () | 17770..18702 | + | 933 | WP_144420837.1 | hypothetical protein | - |
| Psal006a_RS17590 () | 18732..19022 | + | 291 | Protein_22 | IS6 family transposase | - |
| Psal006a_RS17595 () | 19089..19817 | - | 729 | WP_017375910.1 | IS6 family transposase ISPsa2 | Transposase |
| Psal006a_RS17600 () | 20094..20447 | - | 354 | WP_036780061.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| Psal006a_RS17605 () | 20440..20700 | - | 261 | WP_027242955.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| Psal006a_RS17610 () | 20949..21923 | + | 975 | WP_054300271.1 | IS30 family transposase ISPlu1 | Transposase |
| Psal006a_RS17615 () | 22100..23332 | - | 1233 | WP_032126623.1 | MFS transporter | - |
| Psal006a_RS17620 () | 23445..24470 | - | 1026 | WP_032126388.1 | helix-turn-helix domain-containing protein | - |
| Psal006a_RS17625 () | 25231..26252 | + | 1022 | Protein_29 | AAA family ATPase | - |
| Psal006a_RS17630 () | 26276..27025 | + | 750 | WP_036780292.1 | hypothetical protein | - |
| Psal006a_RS17635 () | 27331..27594 | + | 264 | WP_032126138.1 | RNA-binding protein | - |
| Psal006a_RS17640 () | 27901..28872 | - | 972 | WP_033923677.1 | IS91 family transposase ISVsa9 | Transposase |
| Psal006a_RS17645 () | 28797..29096 | - | 300 | WP_075274768.1 | transposase zinc-binding domain-containing protein | - |
| Psal006a_RS17650 () | 29197..29328 | - | 132 | WP_155047304.1 | transposase | - |
| Psal006a_RS17655 () | 29392..29900 | + | 509 | Protein_35 | IS6 family transposase | - |
| Psal006a_RS18640 () | 30186..30407 | + | 222 | Protein_36 | IS6 family transposase ISPsa2 | Transposase |
| Psal006a_RS17665 () | 30472..31992 | - | 1521 | Protein_37 | phage tail tape measure protein | - |
| Psal006a_RS17670 () | 31996..32262 | - | 267 | WP_016211142.1 | DUF4035 domain-containing protein | - |
| Psal006a_RS17675 () | 32319..32642 | - | 324 | WP_075274761.1 | hypothetical protein | - |
| Psal006a_RS17680 () | 32644..33066 | - | 423 | WP_155047305.1 | hypothetical protein | - |
| Psal006a_RS17685 () | 33066..33416 | - | 351 | WP_075274762.1 | DUF3168 domain-containing protein | - |
| Psal006a_RS17690 () | 33413..33808 | - | 396 | WP_075274763.1 | HK97 gp10 family phage protein | - |
| Psal006a_RS17695 () | 33801..34124 | - | 324 | WP_075274764.1 | phage head closure protein | - |
| Psal006a_RS17700 () | 34121..34432 | - | 312 | WP_075274765.1 | head-tail connector protein | - |
| Psal006a_RS18645 () | 34429..34584 | - | 156 | WP_168183246.1 | hypothetical protein | - |
| Psal006a_RS17705 () | 34752..35333 | + | 582 | WP_036778347.1 | hypothetical protein | - |
| Psal006a_RS17710 () | 35369..36535 | - | 1167 | WP_155047306.1 | phage major capsid protein | - |
| Psal006a_RS17715 () | 36591..37247 | - | 657 | WP_054300592.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| Psal006a_RS17720 () | 37210..38451 | - | 1242 | WP_054300593.1 | phage portal protein | - |
| Psal006a_RS17725 () | 38448..39044 | - | 597 | WP_155047307.1 | hypothetical protein | - |
| Psal006a_RS17730 () | 39088..40062 | + | 975 | WP_155047308.1 | IS30 family transposase ISPlu1 | Transposase |
| Psal006a_RS17735 () | 40082..40972 | - | 891 | WP_162034501.1 | terminase large subunit | - |
| Psal006a_RS17740 () | 41240..41722 | - | 483 | WP_155047310.1 | P27 family phage terminase small subunit | - |
| Psal006a_RS17745 () | 41809..42192 | - | 384 | WP_032126915.1 | HNH endonuclease | - |
| Psal006a_RS17750 () | 42371..42772 | - | 402 | WP_052047121.1 | hypothetical protein | - |
| Psal006a_RS17755 () | 42917..43387 | - | 471 | WP_032126916.1 | single-stranded DNA-binding protein | - |
| Psal006a_RS17760 () | 43375..43677 | - | 303 | WP_155047311.1 | hypothetical protein | - |
| Psal006a_RS17765 () | 43674..43961 | - | 288 | WP_033923627.1 | hypothetical protein | - |
| Psal006a_RS17770 () | 44057..44296 | - | 240 | WP_016210963.1 | hypothetical protein | - |
| Psal006a_RS17775 () | 44293..44640 | - | 348 | WP_155047315.1 | hypothetical protein | - |
| Psal006a_RS17780 () | 44633..44995 | - | 363 | WP_155047314.1 | hypothetical protein | - |
| Psal006a_RS17785 () | 44964..45500 | - | 537 | WP_036780304.1 | hypothetical protein | - |
| Psal006a_RS17790 () | 45541..46527 | - | 987 | WP_016211080.1 | hypothetical protein | Relaxase |
| Psal006a_RS17795 () | 46566..46868 | - | 303 | WP_036780299.1 | hypothetical protein | - |
| Psal006a_RS17800 () | 47023..47328 | - | 306 | WP_016211079.1 | hypothetical protein | - |
| Psal006a_RS17805 () | 47538..48281 | - | 744 | WP_016211067.1 | helix-turn-helix transcriptional regulator | - |
| Psal006a_RS17810 () | 48414..49199 | + | 786 | WP_016211077.1 | Malonyl-[acyl-carrier protein] O-methyltransferase | VF |
| Psal006a_RS17815 () | 49522..49761 | + | 240 | WP_075275277.1 | IS91 family transposase ISVsa9 | Transposase |
| Psal006a_RS17820 () | 49686..50657 | + | 972 | WP_196214178.1 | IS91 family transposase ISVsa9 | Transposase |
| Psal006a_RS17825 () | 50805..51452 | - | 648 | WP_036780005.1 | VUT family protein | - |
| Psal006a_RS17830 () | 51436..51867 | - | 432 | WP_016211069.1 | hypothetical protein | - |
| Psal006a_RS17835 () | 51892..52035 | - | 144 | WP_155047030.1 | hypothetical protein | - |
| Psal006a_RS17840 () | 52250..53491 | + | 1242 | WP_016211075.1 | MFS transporter | - |
| Psal006a_RS17845 () | 53495..54307 | + | 813 | WP_016211068.1 | Transcriptional activator protein AnoR | VF |
| Psal006a_RS17850 () | 54304..55104 | - | 801 | WP_016211074.1 | methyltransferase domain-containing protein | - |
| Psal006a_RS17855 () | 55316..56290 | - | 975 | WP_054300271.1 | IS30 family transposase ISPlu1 | Transposase |
| Psal006a_RS17860 () | 56326..56667 | - | 342 | WP_155047312.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| Psal006a_RS17865 () | 56660..56920 | - | 261 | WP_027242955.1 | type II toxin-antitoxin system HicA family toxin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|