MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 60358 bp
Accession: NZ_CP038867 Location: 1..60358 Organism: Vagococcus sp. CF-49 Replicon: plasmid punnamed2
Accession: NZ_CP038867 Location: 1..60358 Organism: Vagococcus sp. CF-49 Replicon: plasmid punnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E4Z98_RS09705 () | 756..1073 | - | 318 | WP_135961202.1 | hypothetical protein | - |
| E4Z98_RS09710 () | 1412..1594 | - | 183 | WP_135961203.1 | hypothetical protein | - |
| E4Z98_RS10090 () | 2171..2407 | + | 237 | WP_168182795.1 | recombinase family protein | - |
| E4Z98_RS10095 () | 2527..2891 | + | 365 | Protein_4 | recombinase family protein | - |
| E4Z98_RS10145 () | 2926..3090 | - | 165 | WP_210410157.1 | hypothetical protein | - |
| E4Z98_RS09720 () | 3347..3724 | - | 378 | WP_135961204.1 | amidase domain-containing protein | - |
| E4Z98_RS09725 () | 3908..4204 | - | 297 | WP_135961205.1 | hypothetical protein | - |
| E4Z98_RS09730 () | 4394..4678 | - | 285 | WP_135253557.1 | hypothetical protein | - |
| E4Z98_RS10100 () | 4814..4969 | - | 156 | WP_168182799.1 | hypothetical protein | - |
| E4Z98_RS09735 () | 5036..5353 | - | 318 | WP_135961206.1 | hypothetical protein | - |
| E4Z98_RS09740 () | 5376..6116 | - | 741 | WP_135961207.1 | hypothetical protein | - |
| E4Z98_RS09745 () | 6400..7723 | + | 1324 | Protein_12 | Y-family DNA polymerase | - |
| E4Z98_RS09750 () | 7792..8091 | + | 300 | WP_135253561.1 | hypothetical protein | - |
| E4Z98_RS09755 () | 8137..8460 | + | 324 | WP_135253562.1 | hypothetical protein | - |
| E4Z98_RS09760 () | 8663..8962 | - | 300 | WP_135961208.1 | hypothetical protein | - |
| E4Z98_RS09765 () | 8965..9781 | - | 817 | Protein_16 | Sporulation initiation inhibitor protein Soj | VF |
| E4Z98_RS09770 () | 10101..11024 | + | 924 | WP_135253565.1 | hypothetical protein | - |
| E4Z98_RS09775 () | 11118..11429 | + | 312 | WP_135253566.1 | hypothetical protein | - |
| E4Z98_RS09780 () | 11450..12355 | - | 906 | WP_135253567.1 | helix-turn-helix domain-containing protein | - |
| E4Z98_RS09785 () | 13064..13345 | + | 282 | WP_135253568.1 | hypothetical protein | - |
| E4Z98_RS09790 () | 13666..13890 | + | 225 | WP_135253569.1 | hypothetical protein | - |
| E4Z98_RS09795 () | 13890..14381 | + | 492 | WP_135253570.1 | Tn3 family transposase TnpR_ISThsp9 | Transposase |
| E4Z98_RS09800 () | 14398..15762 | + | 1365 | WP_135253571.1 | hypothetical protein | - |
| E4Z98_RS09805 () | 15923..20581 | + | 4659 | WP_135253572.1 | LPXTG cell wall anchor domain-containing protein | - |
| E4Z98_RS09810 () | 20823..21401 | + | 579 | WP_135253573.1 | hypothetical protein | - |
| E4Z98_RS09815 () | 21462..21824 | + | 363 | WP_135253574.1 | hypothetical protein | - |
| E4Z98_RS09820 () | 21843..22022 | + | 180 | WP_135253575.1 | hypothetical protein | - |
| E4Z98_RS09825 () | 22036..22239 | + | 204 | WP_135253576.1 | hypothetical protein | - |
| E4Z98_RS09830 () | 22239..22562 | + | 324 | WP_135253577.1 | pilin | - |
| E4Z98_RS09835 () | 22582..23724 | + | 1143 | WP_135253578.1 | hypothetical protein | - |
| E4Z98_RS09840 () | 23714..25201 | + | 1488 | WP_135253579.1 | Levansucrase | VF |
| E4Z98_RS09845 () | 25201..25398 | + | 198 | WP_135253580.1 | hypothetical protein | - |
| E4Z98_RS09850 () | 25398..27440 | + | 2043 | WP_135253581.1 | hypothetical protein | - |
| E4Z98_RS09855 () | 27440..29998 | + | 2559 | WP_135253582.1 | type IV secretory system conjugative DNA transfer family protein | - |
| E4Z98_RS09860 () | 30010..32298 | + | 2289 | WP_135253583.1 | hypothetical protein | - |
| E4Z98_RS09865 () | 32302..32613 | + | 312 | WP_135253584.1 | hypothetical protein | - |
| E4Z98_RS09870 () | 32629..35298 | + | 2670 | WP_135253585.1 | hypothetical protein | - |
| E4Z98_RS09875 () | 35306..36424 | + | 1119 | WP_135253586.1 | lysozyme family protein | - |
| E4Z98_RS09880 () | 36446..37084 | + | 639 | WP_135253587.1 | hypothetical protein | - |
| E4Z98_RS09885 () | 37096..37944 | + | 849 | WP_135253588.1 | hypothetical protein | - |
| E4Z98_RS09890 () | 38214..38498 | + | 285 | WP_135253589.1 | hypothetical protein | - |
| E4Z98_RS09895 () | 38491..38961 | + | 471 | WP_135253590.1 | hypothetical protein | - |
| E4Z98_RS09900 () | 38954..40198 | + | 1245 | WP_135253591.1 | hypothetical protein | Relaxase |
| E4Z98_RS09905 () | 40247..42394 | + | 2148 | WP_135253592.1 | toprim domain-containing protein | - |
| E4Z98_RS09910 () | 42406..42816 | + | 411 | WP_135253593.1 | single-stranded DNA-binding protein | - |
| E4Z98_RS09915 () | 42939..44243 | - | 1305 | WP_135961209.1 | ISL3 family transposase ISEfa11 | Transposase |
| E4Z98_RS09920 () | 44683..44781 | - | 99 | Protein_47 | IS6 family transposase ISLgar4 | Transposase |
| E4Z98_RS09925 () | 44833..45267 | - | 435 | WP_135253535.1 | hypothetical protein | - |
| E4Z98_RS09930 () | 45285..47660 | - | 2376 | WP_135253536.1 | Internalin-A | VF |
| E4Z98_RS09935 () | 47647..48687 | - | 1041 | WP_135253537.1 | DUF916 and DUF3324 domain-containing protein | - |
| E4Z98_RS09940 () | 48706..49509 | - | 804 | WP_135253538.1 | WxL domain-containing protein | - |
| E4Z98_RS09945 () | 49626..50480 | + | 855 | WP_135253539.1 | helix-turn-helix domain-containing protein | - |
| E4Z98_RS10105 () | 50604..50780 | + | 177 | WP_167790873.1 | putative holin-like toxin | - |
| E4Z98_RS09950 () | 50932..51318 | - | 387 | WP_135253540.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| E4Z98_RS09955 () | 51358..51546 | - | 189 | WP_135253541.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| E4Z98_RS09960 () | 51644..52105 | - | 462 | WP_135253542.1 | hypothetical protein | - |
| E4Z98_RS09965 () | 52173..53708 | - | 1536 | WP_135253543.1 | DUF4942 domain-containing protein | - |
| E4Z98_RS09970 () | 54267..55613 | - | 1347 | WP_135253544.1 | PcfJ domain-containing protein | - |
| E4Z98_RS09975 () | 55619..56428 | - | 810 | WP_167790874.1 | hypothetical protein | - |
| E4Z98_RS09980 () | 57080..57322 | - | 243 | WP_135961210.1 | hypothetical protein | - |
| E4Z98_RS09985 () | 57400..57621 | - | 222 | WP_135253547.1 | hypothetical protein | - |
| E4Z98_RS09990 () | 57665..58129 | - | 465 | WP_135253548.1 | hypothetical protein | - |
| E4Z98_RS09995 () | 58377..58958 | + | 582 | WP_135253549.1 | hypothetical protein | - |
| E4Z98_RS10000 () | 59052..59489 | + | 438 | WP_135253550.1 | hypothetical protein | - |
| E4Z98_RS10005 () | 59853..60173 | - | 321 | WP_135253551.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|