MGE detailed information
MGE type: Conjugative plasmid MGE length: 27416 bp
Accession: NZ_CP038866 Location: 1..27416 Organism: Vagococcus sp. CF-49 Replicon: plasmid punnamed1
Accession: NZ_CP038866 Location: 1..27416 Organism: Vagococcus sp. CF-49 Replicon: plasmid punnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E4Z98_RS09545 () | 1875..2207 | + | 333 | Protein_1 | hypothetical protein | - |
| E4Z98_RS09550 () | 2226..2608 | + | 383 | Protein_2 | glycosyltransferase | - |
| E4Z98_RS09555 () | 2684..3255 | + | 572 | Protein_3 | hypothetical protein | - |
| E4Z98_RS09560 () | 3266..5227 | + | 1962 | Protein_4 | TrsE protein | - |
| E4Z98_RS09565 () | 5241..6593 | + | 1353 | WP_002301633.1 | hypothetical protein | - |
| E4Z98_RS09570 () | 6615..7724 | + | 1110 | WP_002301635.1 | N-acetylmuramoyl-L-alanine amidase domain-containing protein | VF |
| E4Z98_RS09575 () | 7737..8288 | + | 552 | WP_002301636.1 | hypothetical protein | - |
| E4Z98_RS09580 () | 8293..8724 | + | 432 | WP_002301637.1 | hypothetical protein | - |
| E4Z98_RS09585 () | 8717..10373 | + | 1657 | Protein_9 | type IV secretory system conjugative DNA transfer family protein | - |
| E4Z98_RS09590 () | 10391..11314 | + | 924 | WP_032495463.1 | hypothetical protein | - |
| E4Z98_RS09595 () | 11316..12248 | + | 933 | WP_011266105.1 | hypothetical protein | - |
| E4Z98_RS09600 () | 12266..13234 | + | 969 | WP_101152102.1 | hypothetical protein | - |
| E4Z98_RS09605 () | 13263..13631 | + | 369 | WP_000516429.1 | hypothetical protein | - |
| E4Z98_RS10140 () | 13691..14520 | + | 830 | Protein_14 | LPXTG cell wall anchor domain-containing protein | - |
| E4Z98_RS09615 () | 14837..15109 | + | 273 | WP_011266100.1 | helix-turn-helix domain-containing protein | - |
| E4Z98_RS09620 () | 15493..16983 | + | 1491 | WP_001025003.1 | primase C-terminal domain-containing protein | - |
| E4Z98_RS10085 () | 17331..17501 | + | 171 | WP_000713594.1 | hypothetical protein | - |
| E4Z98_RS09625 () | 17515..18132 | + | 618 | WP_001062589.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| E4Z98_RS09630 () | 18132..20276 | + | 2145 | WP_000108741.1 | type IA DNA topoisomerase | - |
| E4Z98_RS09635 () | 20365..21261 | + | 897 | WP_001835294.1 | ParA family protein | - |
| E4Z98_RS09640 () | 21359..21568 | + | 210 | WP_000527318.1 | peptide-binding protein | - |
| E4Z98_RS09645 () | 21585..21857 | + | 273 | WP_000301765.1 | antitoxin | Antitoxin Detail |
| E4Z98_RS09650 () | 21859..22722 | + | 864 | WP_001284311.1 | toxin zeta | Toxin Detail |
| E4Z98_RS09655 () | 22985..23722 | - | 738 | WP_002292226.1 | rRNA adenine N-6-methyltransferase | ARG |
| E4Z98_RS09660 () | 23847..23930 | - | 84 | WP_031929417.1 | 23S rRNA methyltransferase attenuator leader peptide ErmL | - |
| E4Z98_RS09670 () | 24714..25031 | + | 318 | WP_002300567.1 | hypothetical protein | - |
| E4Z98_RS09680 () | 25565..26062 | + | 498 | WP_002300565.1 | molecular chaperone DnaJ | - |
| E4Z98_RS09685 () | 26096..26401 | + | 306 | WP_010711855.1 | hypothetical protein | - |
| E4Z98_RS09695 () | 26685..26984 | - | 300 | WP_002301627.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|