MGE detailed information
MGE type: Genomic_island MGE length: 32762 bp
Accession: NZ_CP038808 Location: 920241..953002 Organism: Streptococcus pneumoniae strain R6CIB17 Replicon: chromosome
Accession: NZ_CP038808 Location: 920241..953002 Organism: Streptococcus pneumoniae strain R6CIB17 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E5Q10_RS04860 () | 915525..916139 | + | 615 | WP_000476388.1 | cell wall hydrolase Pmp23 | - |
| E5Q10_RS04865 () | 916213..917187 | + | 975 | WP_001227739.1 | DUF1002 domain-containing protein | - |
| E5Q10_RS04870 () | 917261..918892 | + | 1632 | WP_000914581.1 | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | - |
| E5Q10_RS04875 () | 919106..919384 | + | 279 | WP_000710803.1 | hypothetical protein | - |
| E5Q10_RS04880 () | 919630..919848 | + | 219 | WP_000885335.1 | helix-turn-helix transcriptional regulator | - |
| E5Q10_RS04890 () | 920241..921266 | + | 1026 | WP_000790743.1 | iron-siderophore ABC transporter substrate-binding protein | - |
| E5Q10_RS04895 () | 921256..922263 | + | 1008 | WP_001244692.1 | Vitamin B12 import system permease protein BtuC | VF |
| E5Q10_RS04900 () | 922263..923270 | + | 1008 | WP_001180357.1 | Vitamin B12 import system permease protein BtuC | VF |
| E5Q10_RS04905 () | 923270..924064 | + | 795 | WP_000677519.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| E5Q10_RS04910 () | 924452..924841 | + | 390 | WP_074017679.1 | restriction endonuclease subunit S | - |
| E5Q10_RS11010 () | 924807..925121 | + | 315 | WP_161801538.1 | hypothetical protein | - |
| E5Q10_RS04920 () | 925805..925966 | + | 162 | WP_000368174.1 | hypothetical protein | - |
| E5Q10_RS04925 () | 926058..927737 | + | 1680 | WP_000031832.1 | Tn3 family transposase TnpR_ISAcsp1 | Transposase |
| E5Q10_RS04930 () | 928005..928571 | + | 567 | WP_000234985.1 | hypothetical protein | - |
| E5Q10_RS04935 () | 928893..929081 | + | 189 | WP_000179772.1 | hypothetical protein | - |
| E5Q10_RS04940 () | 929143..929958 | + | 816 | WP_000262006.1 | ATP-grasp domain-containing protein | - |
| E5Q10_RS04945 () | 929958..930812 | + | 855 | WP_000900020.1 | ADP-ribosylglycohydrolase family protein | - |
| E5Q10_RS04950 () | 930924..931808 | + | 885 | WP_000710119.1 | diacylglycerol kinase family lipid kinase | - |
| E5Q10_RS04955 () | 931971..933710 | + | 1740 | WP_000423451.1 | glycoside hydrolase family 13 protein | - |
| E5Q10_RS04960 () | 933796..934113 | + | 318 | WP_000995820.1 | hypothetical protein | - |
| E5Q10_RS04965 () | 934159..934440 | + | 282 | WP_000266233.1 | hypothetical protein | - |
| E5Q10_RS04970 () | 934885..935361 | + | 477 | WP_000579612.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| E5Q10_RS04975 () | 935361..936122 | + | 762 | WP_000405357.1 | zeta toxin family protein | Toxin Detail |
| E5Q10_RS04980 () | 936150..937306 | + | 1157 | Protein_924 | hypothetical protein | - |
| E5Q10_RS04990 () | 938138..938497 | + | 360 | WP_000529543.1 | hypothetical protein | - |
| E5Q10_RS04995 () | 938507..938836 | + | 330 | WP_000263037.1 | MobC family plasmid mobilization relaxosome protein | - |
| E5Q10_RS11015 () | 938859..940744 | + | 1886 | Protein_927 | relaxase/mobilization nuclease domain-containing protein | - |
| E5Q10_RS05015 () | 940789..941643 | - | 855 | WP_000837499.1 | XRE/MutR family transcriptional regulator | - |
| E5Q10_RS05020 () | 941724..941795 | + | 72 | WP_001809668.1 | peptide pheromone SHP3 | - |
| E5Q10_RS05025 () | 941895..943190 | + | 1296 | WP_000794307.1 | nucleotide sugar dehydrogenase | - |
| E5Q10_RS05030 () | 943174..943800 | + | 627 | WP_000862562.1 | PIG-L family deacetylase | - |
| E5Q10_RS05035 () | 943810..944592 | + | 783 | WP_000809423.1 | sugar phosphate isomerase/epimerase | - |
| E5Q10_RS05040 () | 944615..946507 | + | 1893 | WP_000710678.1 | hypothetical protein | - |
| E5Q10_RS05045 () | 946536..947642 | + | 1107 | WP_000444113.1 | hypothetical protein | - |
| E5Q10_RS05050 () | 947650..948960 | + | 1311 | WP_000423517.1 | AMP-binding protein | - |
| E5Q10_RS05055 () | 948962..950185 | + | 1224 | WP_000252068.1 | ATP phosphoribosyltransferase regulatory subunit | - |
| E5Q10_RS05060 () | 950175..951125 | + | 951 | WP_000389975.1 | hypothetical protein | - |
| E5Q10_RS05065 () | 951140..952339 | + | 1200 | WP_000238677.1 | ATP-grasp domain-containing protein | - |
| E5Q10_RS05070 () | 952358..953002 | + | 645 | WP_000270072.1 | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase | VF |
| E5Q10_RS05075 () | 953385..954596 | + | 1212 | WP_000687010.1 | MFS transporter | - |
| E5Q10_RS05080 () | 955255..955476 | + | 222 | WP_000286251.1 | helix-turn-helix domain-containing protein | - |
| E5Q10_RS05090 () | 955995..956234 | + | 240 | Protein_942 | transposase family protein | - |
| E5Q10_RS05095 () | 956378..957607 | + | 1230 | WP_000703358.1 | FtsW/RodA/SpoVE family cell cycle protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Streptococcus pneumoniae R6 | Genomic island | TA6282 | NC_003098 | 920239..953000 | 0 |