MGE detailed information
MGE type: Genomic_island MGE length: 26720 bp
Accession: NZ_CP038791 Location: 4414821..4441540 Organism: Escherichia coli strain PF9285 Replicon: chromosome
Accession: NZ_CP038791 Location: 4414821..4441540 Organism: Escherichia coli strain PF9285 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E5M00_RS21995 () | 4410300..4410803 | - | 504 | WP_000870592.1 | type 1 fimbria minor subunit FimG | - |
| E5M00_RS22000 () | 4410816..4411346 | - | 531 | WP_001244827.1 | type 1 fimbria minor subunit FimF | - |
| E5M00_RS22005 () | 4411356..4413992 | - | 2637 | WP_000121002.1 | fimbrial usher FimD | - |
| E5M00_RS22010 () | 4414059..4414784 | - | 726 | WP_000066560.1 | type 1 fimbria chaperone FimC | - |
| E5M00_RS22015 () | 4414821..4415360 | - | 540 | WP_000824114.1 | putative major fimbrial subunit LpfA | VF |
| E5M00_RS22020 () | 4415425..4415973 | - | 549 | WP_000695564.1 | Type-1 fimbrial protein, A chain | VF |
| E5M00_RS22025 () | 4416456..4417052 | - | 597 | WP_000044711.1 | Tyrosine recombinase XerD | VF |
| E5M00_RS22030 () | 4417530..4418132 | - | 603 | WP_000790583.1 | Tyrosine recombinase XerC | VF |
| E5M00_RS22035 () | 4419588..4420304 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| E5M00_RS22040 () | 4420324..4421430 | + | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| E5M00_RS22045 () | 4421495..4422475 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| E5M00_RS22050 () | 4423058..4424044 | - | 987 | WP_001323209.1 | hypothetical protein | - |
| E5M00_RS22055 () | 4424414..4424659 | + | 246 | Protein_4219 | GNAT family N-acetyltransferase | - |
| E5M00_RS22060 () | 4425036..4425293 | + | 258 | WP_001054376.1 | hypothetical protein | Toxin Detail |
| E5M00_RS22065 () | 4425305..4425850 | + | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| E5M00_RS22070 () | 4425906..4426652 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| E5M00_RS22075 () | 4426821..4427039 | + | 219 | Protein_4223 | hypothetical protein | - |
| E5M00_RS22080 () | 4427438..4428559 | + | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| E5M00_RS22085 () | 4428556..4428834 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB | - |
| E5M00_RS22090 () | 4428846..4430159 | + | 1314 | WP_000460843.1 | galactitol-specific PTS transporter subunit IIC | - |
| E5M00_RS22095 () | 4430172..4430978 | + | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| E5M00_RS22100 () | 4431109..4431540 | + | 432 | WP_000606406.1 | PTS sugar transporter subunit IIA | - |
| E5M00_RS22105 () | 4431552..4432184 | + | 633 | WP_000600622.1 | ribulose-phosphate 3 epimerase family protein | - |
| E5M00_RS22110 () | 4432201..4432983 | + | 783 | WP_000082780.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| E5M00_RS22115 () | 4433286..4434074 | + | 789 | WP_000251798.1 | IclR family transcriptional regulator | - |
| E5M00_RS22120 () | 4434079..4434984 | + | 906 | WP_001335841.1 | dihydrodipicolinate synthase family protein | - |
| E5M00_RS22125 () | 4434995..4436962 | + | 1968 | WP_000116326.1 | xylonate dehydratase YjhG | - |
| E5M00_RS22130 () | 4437069..4438418 | + | 1350 | WP_001128363.1 | GntP family permease | - |
| E5M00_RS22135 () | 4438765..4439751 | + | 987 | WP_000373366.1 | sugar-binding transcriptional regulator | - |
| E5M00_RS22140 () | 4439792..4440658 | - | 867 | WP_071587474.1 | multidrug DMT transporter permease | - |
| E5M00_RS22150 () | 4440899..4441540 | - | 642 | WP_000439687.1 | L-fuculose-phosphate aldolase | - |
| E5M00_RS22155 () | 4441571..4442686 | - | 1116 | WP_001022014.1 | S-methyl-5-thioribose-1-phosphate isomerase | - |
| E5M00_RS22160 () | 4442696..4443955 | - | 1260 | WP_000132327.1 | S-methyl-5-thioribose kinase | - |
| E5M00_RS22165 () | 4444695..4444793 | - | 99 | Protein_4240 | toxin | - |
| E5M00_RS22170 () | 4444883..4445251 | - | 369 | WP_001295723.1 | type IV toxin-antitoxin system YeeU family antitoxin | - |
| E5M00_RS22175 () | 4445414..4445635 | - | 222 | WP_000692345.1 | DUF987 domain-containing protein | - |
| E5M00_RS22180 () | 4445698..4446174 | - | 477 | WP_001186775.1 | RadC family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|