MGE detailed information
MGE type: Prophage MGE length: 52721 bp
Accession: NZ_CP038791 Location: 3276810..3329530 Organism: Escherichia coli strain PF9285 Replicon: chromosome
Accession: NZ_CP038791 Location: 3276810..3329530 Organism: Escherichia coli strain PF9285 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E5M00_RS16215 () | 3273325..3274071 | + | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| E5M00_RS16220 () | 3274160..3274846 | + | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| E5M00_RS16225 () | 3275023..3275226 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| E5M00_RS16230 () | 3275261..3276721 | - | 1461 | WP_000527809.1 | mannitol dehydrogenase family protein | - |
| E5M00_RS16235 () | 3276810..3278093 | - | 1284 | Protein_3089 | MHS family MFS transporter YdfJ | - |
| E5M00_RS16240 () | 3278698..3278811 | + | 114 | WP_120795384.1 | hypothetical protein | - |
| E5M00_RS16245 () | 3278880..3279113 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| E5M00_RS16250 () | 3279430..3280020 | + | 591 | WP_000086527.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| E5M00_RS16255 () | 3280118..3280693 | - | 576 | WP_000885587.1 | tail fiber assembly protein | - |
| E5M00_RS16260 () | 3280693..3283716 | - | 3024 | WP_109554193.1 | prophage tail fiber N-terminal domain-containing protein | - |
| E5M00_RS16265 () | 3283781..3284380 | - | 600 | WP_001556601.1 | Outer membrane protein X | VF |
| E5M00_RS16270 () | 3284447..3287845 | - | 3399 | WP_135798783.1 | host specificity protein J | - |
| E5M00_RS16275 () | 3287906..3288538 | - | 633 | WP_071593509.1 | tail assembly protein | - |
| E5M00_RS16280 () | 3288475..3289218 | - | 744 | WP_000194780.1 | C40 family peptidase | - |
| E5M00_RS16285 () | 3289224..3289922 | - | 699 | WP_001152639.1 | phage minor tail protein L | - |
| E5M00_RS16290 () | 3289922..3290251 | - | 330 | WP_000847360.1 | phage tail protein | - |
| E5M00_RS16295 () | 3290248..3292809 | - | 2562 | WP_000840335.1 | phage tail tape measure protein | - |
| E5M00_RS16300 () | 3292802..3293236 | - | 435 | WP_000459457.1 | phage tail assembly protein T | - |
| E5M00_RS16305 () | 3293218..3293640 | - | 423 | WP_000479150.1 | phage minor tail protein G | - |
| E5M00_RS16310 () | 3293656..3294396 | - | 741 | WP_001349920.1 | phage tail protein | - |
| E5M00_RS16315 () | 3294404..3294799 | - | 396 | WP_000683105.1 | phage minor tail U family protein | - |
| E5M00_RS16320 () | 3294796..3295374 | - | 579 | WP_000975070.1 | phage tail protein | - |
| E5M00_RS16325 () | 3295386..3295739 | - | 354 | WP_000753007.1 | head-tail joining protein | - |
| E5M00_RS16330 () | 3295751..3296149 | - | 399 | WP_000158905.1 | DNA-packaging protein FI | - |
| E5M00_RS16335 () | 3296191..3297216 | - | 1026 | WP_052934322.1 | major capsid protein | - |
| E5M00_RS16340 () | 3297272..3297604 | - | 333 | WP_001556613.1 | head decoration protein | - |
| E5M00_RS16345 () | 3297614..3298933 | - | 1320 | WP_000123262.1 | S49 family peptidase | - |
| E5M00_RS16350 () | 3298914..3300515 | - | 1602 | WP_135798784.1 | phage portal protein | - |
| E5M00_RS16355 () | 3300512..3300718 | - | 207 | WP_000198149.1 | gpW family protein | - |
| E5M00_RS16360 () | 3300715..3302640 | - | 1926 | WP_001027259.1 | phage terminase large subunit family protein | - |
| E5M00_RS16365 () | 3302615..3303160 | - | 546 | WP_000453611.1 | DNA-packaging protein | - |
| E5M00_RS16370 () | 3303549..3303782 | + | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| E5M00_RS16375 () | 3303840..3304250 | + | 411 | WP_024197023.1 | DUF1398 domain-containing protein | - |
| E5M00_RS16380 () | 3304402..3304575 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| E5M00_RS16385 () | 3304747..3304902 | - | 156 | WP_001309517.1 | hypothetical protein | - |
| E5M00_RS16390 () | 3304982..3305047 | - | 66 | WP_120795388.1 | hypothetical protein | - |
| E5M00_RS16395 () | 3305050..3305238 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| E5M00_RS16400 () | 3305249..3305461 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| E5M00_RS16405 () | 3305824..3306321 | - | 498 | WP_109930328.1 | DUF2514 domain-containing protein | - |
| E5M00_RS16410 () | 3306318..3306851 | - | 534 | WP_001556614.1 | lysozyme | - |
| E5M00_RS16415 () | 3306848..3307159 | - | 312 | WP_000189916.1 | YdfR family protein | - |
| E5M00_RS16420 () | 3307164..3307379 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| E5M00_RS16425 () | 3308133..3308348 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| E5M00_RS16430 () | 3308649..3308861 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| E5M00_RS16435 () | 3308916..3309005 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| E5M00_RS16440 () | 3309283..3310035 | - | 753 | WP_001556615.1 | antitermination protein | - |
| E5M00_RS16445 () | 3310049..3311098 | - | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| E5M00_RS16450 () | 3311100..3311378 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| E5M00_RS16455 () | 3311445..3311696 | - | 252 | WP_000980994.1 | hypothetical protein | - |
| E5M00_RS16460 () | 3311913..3312068 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| E5M00_RS16465 () | 3312140..3312427 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| E5M00_RS16470 () | 3312427..3312666 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| E5M00_RS16475 () | 3312691..3312996 | + | 306 | WP_001326990.1 | hypothetical protein | - |
| E5M00_RS16480 () | 3313199..3313531 | + | 333 | WP_001301033.1 | protein FlxA | - |
| E5M00_RS16485 () | 3313968..3315281 | - | 1314 | WP_000589005.1 | ISNCY family transposase ISCARN112 | Transposase |
| E5M00_RS16500 () | 3316682..3317107 | + | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| E5M00_RS16505 () | 3317104..3317454 | + | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| E5M00_RS16510 () | 3317485..3319098 | + | 1614 | WP_001556616.1 | IS66 family transposase ISEc23 | Transposase |
| E5M00_RS16515 () | 3319488..3319844 | - | 357 | WP_001310834.1 | class I SAM-dependent methyltransferase | - |
| E5M00_RS16520 () | 3319841..3320263 | - | 423 | WP_001151262.1 | DUF977 family protein | - |
| E5M00_RS16525 () | 3320304..3321269 | - | 966 | WP_000054512.1 | hypothetical protein | - |
| E5M00_RS16530 () | 3321250..3321771 | - | 522 | WP_000705358.1 | hypothetical protein | - |
| E5M00_RS16535 () | 3321755..3321985 | - | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| E5M00_RS16540 () | 3322069..3322476 | + | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| E5M00_RS16545 () | 3322643..3322798 | + | 156 | WP_000379575.1 | DUF1391 family protein | - |
| E5M00_RS16550 () | 3322958..3323176 | + | 219 | WP_001171942.1 | hypothetical protein | - |
| E5M00_RS16560 () | 3323744..3323932 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| E5M00_RS16565 () | 3323929..3324120 | + | 192 | WP_001083297.1 | lysis protein YdfD | - |
| E5M00_RS16570 () | 3324213..3326684 | + | 2472 | WP_000048342.1 | exonuclease | - |
| E5M00_RS16575 () | 3326757..3327008 | + | 252 | WP_000005552.1 | excisionase family protein | - |
| E5M00_RS16580 () | 3327043..3328323 | + | 1281 | WP_000876958.1 | Putative defective protein IntQ ; Integrase | Integrase |
| E5M00_RS16585 () | 3328343..3328453 | - | 111 | WP_001360138.1 | hypothetical protein | - |
| E5M00_RS16590 () | 3328511..3329530 | - | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| E5M00_RS16595 () | 3329542..3330756 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| E5M00_RS16600 () | 3330962..3331288 | - | 327 | WP_000598292.1 | YnfA family protein | - |
| E5M00_RS16605 () | 3331423..3331764 | + | 342 | WP_000705211.1 | DUF1283 family protein | - |
| E5M00_RS16610 () | 3331799..3332359 | + | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| E5M00_RS16615 () | 3332362..3333072 | - | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| E5M00_RS16620 () | 3333180..3333485 | + | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|