MGE detailed information
MGE type: Prophage MGE length: 47916 bp
Accession: NZ_CP038791 Location: 3030334..3078249 Organism: Escherichia coli strain PF9285 Replicon: chromosome
Accession: NZ_CP038791 Location: 3030334..3078249 Organism: Escherichia coli strain PF9285 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E5M00_RS15025 () | 3026384..3027367 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| E5M00_RS15030 () | 3027845..3029218 | + | 1374 | WP_000123737.1 | ATP-dependent RNA helicase DbpA | - |
| E5M00_RS15035 () | 3029347..3030282 | - | 936 | WP_001157381.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| E5M00_RS15040 () | 3030334..3031569 | - | 1236 | WP_000040838.1 | Putative defective protein IntQ ; Integrase | Integrase |
| E5M00_RS15045 () | 3031571..3031786 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| E5M00_RS15050 () | 3031886..3032074 | - | 189 | WP_001298826.1 | DUF1187 family protein | - |
| - () | 3031890..3032068 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 3031890..3032068 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 3031890..3032068 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 3031890..3032068 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| E5M00_RS15055 () | 3032067..3032261 | - | 195 | WP_021500490.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| E5M00_RS15060 () | 3032325..3033377 | - | 1053 | WP_001004422.1 | recombinase RecT | - |
| E5M00_RS15065 () | 3033389..3036511 | - | 3123 | WP_135798769.1 | exodeoxyribonuclease VIII | - |
| E5M00_RS15070 () | 3036613..3036887 | - | 275 | Protein_2863 | hypothetical protein | - |
| E5M00_RS15075 () | 3036962..3037132 | - | 171 | WP_077688178.1 | hypothetical protein | - |
| E5M00_RS15080 () | 3037132..3037353 | - | 222 | WP_000560220.1 | killing protein KilR | - |
| E5M00_RS15085 () | 3037795..3038283 | + | 489 | WP_001328749.1 | superinfection exclusion B family protein | - |
| E5M00_RS15090 () | 3038280..3038435 | - | 156 | WP_001169151.1 | YdaF family protein | - |
| E5M00_RS15100 () | 3038888..3039364 | - | 477 | WP_000948459.1 | DNA-binding transcriptional repressor RacR | - |
| E5M00_RS15105 () | 3039488..3039784 | + | 297 | WP_000712069.1 | toxin YdaS | - |
| E5M00_RS15110 () | 3039807..3040229 | + | 423 | WP_073841147.1 | hypothetical protein | - |
| E5M00_RS15115 () | 3040242..3041099 | + | 858 | WP_073841148.1 | DUF1376 domain-containing protein | - |
| E5M00_RS15120 () | 3041106..3041852 | + | 747 | WP_073841774.1 | ATP-binding protein | - |
| E5M00_RS15125 () | 3041875..3042636 | + | 762 | Protein_2873 | DUF1627 domain-containing protein | - |
| E5M00_RS15130 () | 3042652..3043068 | + | 417 | WP_135798770.1 | DUF977 family protein | - |
| E5M00_RS15135 () | 3043868..3045283 | + | 1416 | WP_073841078.1 | hypothetical protein | - |
| E5M00_RS15145 () | 3045873..3046211 | - | 339 | WP_000149055.1 | DUF1971 domain-containing protein | - |
| E5M00_RS15155 () | 3047025..3047624 | + | 600 | WP_001702268.1 | DUF1367 family protein | - |
| E5M00_RS15160 () | 3047624..3047914 | + | 291 | WP_001741607.1 | DUF1364 domain-containing protein | - |
| E5M00_RS15165 () | 3047911..3048453 | + | 543 | WP_000640144.1 | DUF1133 family protein | - |
| E5M00_RS15170 () | 3048675..3049244 | + | 570 | WP_001208722.1 | hypothetical protein | - |
| E5M00_RS15175 () | 3049213..3049515 | - | 303 | WP_135798771.1 | hypothetical protein | - |
| E5M00_RS15180 () | 3049592..3049933 | + | 342 | WP_029488570.1 | phage holin, lambda family | - |
| E5M00_RS15185 () | 3049937..3050413 | + | 477 | WP_001194112.1 | glycoside hydrolase family protein | - |
| E5M00_RS15190 () | 3050630..3050815 | + | 186 | WP_001228696.1 | prophage lysis lipoprotein RzoD | - |
| E5M00_RS15195 () | 3051012..3052469 | + | 1458 | WP_001097893.1 | Trk system potassium transporter TrkG | - |
| E5M00_RS15200 () | 3052607..3053398 | + | 792 | WP_001291093.1 | ParB/Srx family N-terminal domain-containing protein | - |
| E5M00_RS15205 () | 3053391..3054323 | + | 933 | WP_001204028.1 | hypothetical protein | - |
| E5M00_RS15210 () | 3054259..3054510 | + | 252 | WP_000613571.1 | hypothetical protein | - |
| E5M00_RS15215 () | 3054514..3055608 | + | 1095 | WP_016242650.1 | terminase small subunit | - |
| E5M00_RS15220 () | 3055589..3056890 | + | 1302 | WP_000625348.1 | terminase family protein | - |
| E5M00_RS15225 () | 3056893..3058299 | + | 1407 | WP_000763702.1 | DUF4055 domain-containing protein | - |
| E5M00_RS15230 () | 3058283..3059395 | + | 1113 | WP_001470067.1 | hypothetical protein | - |
| E5M00_RS15235 () | 3059500..3060264 | + | 765 | WP_000770042.1 | hypothetical protein | - |
| E5M00_RS15240 () | 3060363..3061502 | + | 1140 | WP_000918487.1 | hypothetical protein | - |
| E5M00_RS27575 () | 3061545..3061721 | + | 177 | WP_000908084.1 | hypothetical protein | - |
| E5M00_RS15245 () | 3061725..3062120 | + | 396 | WP_000634211.1 | hypothetical protein | - |
| E5M00_RS15250 () | 3062120..3062266 | + | 147 | Protein_2897 | glutamate 5-kinase | - |
| E5M00_RS15255 () | 3062315..3063012 | + | 698 | Protein_2898 | IS1 family transposase IS1A | Transposase |
| E5M00_RS15260 () | 3063028..3063279 | + | 252 | Protein_2899 | glutamate 5-kinase | - |
| E5M00_RS15265 () | 3063280..3063660 | + | 381 | WP_001029819.1 | hypothetical protein | - |
| E5M00_RS15270 () | 3063657..3064049 | + | 393 | WP_000144678.1 | hypothetical protein | - |
| E5M00_RS15275 () | 3064076..3065038 | + | 963 | WP_000094292.1 | hypothetical protein | - |
| E5M00_RS15280 () | 3065189..3065548 | + | 360 | WP_122987916.1 | hypothetical protein | - |
| E5M00_RS15290 () | 3066022..3069255 | + | 3234 | WP_089527434.1 | phage tail tape measure protein | - |
| E5M00_RS15295 () | 3069248..3069586 | + | 339 | WP_000024051.1 | phage tail protein | - |
| E5M00_RS15300 () | 3069586..3070284 | + | 699 | WP_089527433.1 | phage minor tail protein L | - |
| E5M00_RS15305 () | 3070290..3071033 | + | 744 | WP_135798772.1 | C40 family peptidase | - |
| E5M00_RS15310 () | 3070931..3071578 | + | 648 | WP_059327740.1 | tail assembly protein | - |
| E5M00_RS15315 () | 3071639..3075118 | + | 3480 | WP_135798773.1 | host specificity protein J | - |
| E5M00_RS15320 () | 3075186..3075785 | + | 600 | WP_135798774.1 | Outer membrane protein X | VF |
| E5M00_RS15325 () | 3075850..3078249 | + | 2400 | WP_114446863.1 | prophage tail fiber N-terminal domain-containing protein | - |
| E5M00_RS15330 () | 3078246..3078527 | + | 282 | WP_000654154.1 | hypothetical protein | - |
| E5M00_RS15335 () | 3078537..3079241 | + | 705 | WP_135798775.1 | tail fiber domain-containing protein | - |
| E5M00_RS15340 () | 3079252..3079545 | + | 294 | WP_000355601.1 | hypothetical protein | - |
| E5M00_RS15345 () | 3079565..3079684 | + | 120 | Protein_2915 | tail fiber assembly protein | - |
| E5M00_RS15355 () | 3079895..3080752 | - | 858 | WP_016244580.1 | iron/manganese ABC transporter permease subunit SitD | - |
| E5M00_RS15360 () | 3080749..3081606 | - | 858 | WP_001101728.1 | iron/manganese ABC transporter permease subunit SitC | - |
| E5M00_RS15365 () | 3081603..3082430 | - | 828 | WP_000983718.1 | iron/manganese ABC transporter ATP-binding protein SitB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|