MGE detailed information
MGE type: Prophage MGE length: 43966 bp
Accession: NZ_CP038662 Location: 2021679..2065644 Organism: Serratia nematodiphila strain DH-S01 Replicon: chromosome
Accession: NZ_CP038662 Location: 2021679..2065644 Organism: Serratia nematodiphila strain DH-S01 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E5D60_RS09600 () | 2017372..2018109 | + | 738 | WP_004928821.1 | phosphatase | - |
| E5D60_RS09605 () | 2018152..2018730 | + | 579 | WP_015377474.1 | molecular chaperone | - |
| E5D60_RS09610 () | 2018888..2019541 | + | 654 | WP_033633339.1 | DUF533 domain-containing protein | - |
| E5D60_RS09615 () | 2019610..2021643 | + | 2034 | WP_033633338.1 | prolyl oligopeptidase family serine peptidase | - |
| E5D60_RS09620 () | 2021679..2022347 | - | 669 | WP_004928833.1 | exodeoxyribonuclease X | - |
| E5D60_RS09625 () | 2022374..2023120 | - | 747 | WP_033633337.1 | carbon-nitrogen hydrolase family protein | - |
| E5D60_RS09630 () | 2023490..2023915 | + | 426 | WP_004928840.1 | RNA polymerase-binding protein DksA | - |
| E5D60_RS09635 () | 2023920..2024816 | - | 897 | WP_033633336.1 | Protein AmpG | VF |
| E5D60_RS09640 () | 2024965..2025360 | + | 396 | WP_033633335.1 | RidA family protein | - |
| E5D60_RS09645 () | 2025517..2026470 | + | 954 | WP_004928848.1 | prolyl aminopeptidase | - |
| E5D60_RS09650 () | 2026502..2026732 | - | 231 | WP_016928156.1 | DNA polymerase III subunit theta | - |
| E5D60_RS09655 () | 2027077..2027595 | + | 519 | WP_015377481.1 | non-heme ferritin | - |
| E5D60_RS09660 () | 2027888..2028304 | + | 417 | WP_046686875.1 | CopC domain-containing protein YobA | - |
| E5D60_RS09665 () | 2028307..2029188 | + | 882 | WP_033633334.1 | copper homeostasis membrane protein CopD | - |
| E5D60_RS09670 () | 2029258..2029599 | + | 342 | WP_033633333.1 | YebY family protein | - |
| - () | 2029697..2029837 | - | 141 | - | - | Antitoxin Detail |
| - () | 2029741..2029837 | + | 97 | - | - | Toxin Detail |
| E5D60_RS09675 () | 2029883..2030971 | - | 1089 | WP_135638008.1 | putative transcriptional regulatory protein YedW ; Integrase | Integrase |
| E5D60_RS09680 () | 2031091..2031309 | - | 219 | WP_071844562.1 | ogr/Delta-like zinc finger family protein | - |
| E5D60_RS09685 () | 2031383..2032480 | - | 1098 | WP_135638010.1 | phage late control D family protein | - |
| E5D60_RS09690 () | 2032477..2032941 | - | 465 | WP_135638012.1 | phage tail protein | - |
| E5D60_RS09695 () | 2032938..2035481 | - | 2544 | WP_135638014.1 | phage tail tape measure protein | - |
| E5D60_RS09700 () | 2035474..2035593 | - | 120 | WP_071844561.1 | GpE family phage tail protein | - |
| E5D60_RS09705 () | 2035608..2035898 | - | 291 | WP_135638016.1 | phage tail assembly protein | - |
| E5D60_RS09710 () | 2035959..2036474 | - | 516 | WP_121535954.1 | phage major tail tube protein | - |
| E5D60_RS09715 () | 2036485..2037660 | - | 1176 | WP_135638018.1 | phage tail sheath protein | - |
| E5D60_RS09720 () | 2037856..2038365 | - | 510 | WP_135638790.1 | tail fiber assembly protein | - |
| E5D60_RS09725 () | 2038365..2039717 | - | 1353 | WP_135638020.1 | phage tail protein | - |
| E5D60_RS09730 () | 2039723..2039992 | - | 270 | WP_135638022.1 | hypothetical protein | - |
| E5D60_RS09735 () | 2039989..2042331 | - | 2343 | WP_135638024.1 | phage tail protein | - |
| E5D60_RS09740 () | 2042328..2042933 | - | 606 | WP_135638026.1 | phage tail protein I | - |
| E5D60_RS09745 () | 2042926..2043834 | - | 909 | WP_135638028.1 | baseplate assembly protein | - |
| E5D60_RS09750 () | 2043831..2044181 | - | 351 | WP_135638030.1 | GPW/gp25 family protein | - |
| E5D60_RS09755 () | 2044178..2044771 | - | 594 | WP_135638792.1 | phage baseplate assembly protein V | - |
| E5D60_RS09760 () | 2044906..2045817 | + | 912 | WP_135638032.1 | hypothetical protein | - |
| E5D60_RS09765 () | 2045913..2046359 | - | 447 | WP_135638034.1 | phage virion morphogenesis protein | - |
| E5D60_RS09770 () | 2046352..2046783 | - | 432 | WP_089187101.1 | phage tail protein | - |
| E5D60_RS09780 () | 2046891..2047349 | - | 459 | WP_135638038.1 | Rz-like lysis system protein LysB | - |
| E5D60_RS09785 () | 2047346..2047843 | - | 498 | WP_135638040.1 | glycoside hydrolase family 104 protein | - |
| E5D60_RS09790 () | 2047818..2048150 | - | 333 | WP_135638042.1 | phage holin family protein | - |
| E5D60_RS09795 () | 2048153..2048521 | - | 369 | WP_135638044.1 | hypothetical protein | - |
| E5D60_RS09800 () | 2048526..2048729 | - | 204 | WP_046373880.1 | tail protein X | - |
| E5D60_RS09805 () | 2048729..2049193 | - | 465 | WP_135638046.1 | head completion/stabilization protein | - |
| E5D60_RS09810 () | 2049292..2049927 | - | 636 | WP_135638794.1 | terminase endonuclease subunit | - |
| E5D60_RS09815 () | 2049966..2051030 | - | 1065 | WP_135638047.1 | phage major capsid protein, P2 family | - |
| E5D60_RS09820 () | 2051091..2051924 | - | 834 | WP_135638049.1 | GPO family capsid scaffolding protein | - |
| E5D60_RS09825 () | 2052068..2053834 | + | 1767 | WP_135638051.1 | terminase ATPase subunit family protein | - |
| E5D60_RS09830 () | 2053835..2054884 | + | 1050 | WP_135638053.1 | phage portal protein | - |
| E5D60_RS09835 () | 2054946..2055239 | - | 294 | WP_135638796.1 | hypothetical protein | - |
| E5D60_RS09840 () | 2055346..2056011 | - | 666 | WP_135638055.1 | hypothetical protein | - |
| E5D60_RS09845 () | 2056011..2056445 | - | 435 | WP_135638057.1 | hypothetical protein | - |
| E5D60_RS09850 () | 2056458..2057564 | - | 1107 | WP_135638059.1 | hypothetical protein | - |
| E5D60_RS25095 () | 2057641..2057781 | - | 141 | WP_174262910.1 | hypothetical protein | - |
| E5D60_RS09860 () | 2057906..2058088 | - | 183 | WP_060429994.1 | hypothetical protein | - |
| E5D60_RS09865 () | 2058229..2060703 | - | 2475 | WP_135638061.1 | replication endonuclease | - |
| E5D60_RS09870 () | 2060700..2061626 | - | 927 | WP_135638063.1 | DNA cytosine methyltransferase | - |
| E5D60_RS09875 () | 2061613..2061843 | - | 231 | WP_135638065.1 | hypothetical protein | - |
| E5D60_RS09880 () | 2061837..2062661 | - | 825 | WP_135638067.1 | DNA adenine methylase | - |
| E5D60_RS09885 () | 2062664..2062882 | - | 219 | WP_135638070.1 | TraR/DksA family transcriptional regulator | - |
| E5D60_RS09890 () | 2062882..2063154 | - | 273 | WP_135638072.1 | DUF2732 family protein | - |
| E5D60_RS09895 () | 2063221..2063574 | - | 354 | WP_135638074.1 | DUF5347 domain-containing protein | - |
| E5D60_RS09900 () | 2063538..2063747 | - | 210 | WP_072269748.1 | DUF2724 domain-containing protein | - |
| E5D60_RS09905 () | 2063758..2064267 | - | 510 | WP_135638076.1 | phage regulatory CII family protein | - |
| E5D60_RS09910 () | 2064299..2064682 | - | 384 | WP_135638078.1 | hypothetical protein | - |
| E5D60_RS09915 () | 2064787..2065644 | + | 858 | WP_135638080.1 | phage repressor protein CI | - |
| E5D60_RS09920 () | 2065646..2066356 | + | 711 | WP_135638082.1 | hypothetical protein | - |
| E5D60_RS09925 () | 2066619..2067266 | + | 648 | WP_135638798.1 | hypothetical protein | - |
| E5D60_RS09930 () | 2067806..2068210 | + | 405 | WP_033633332.1 | hypothetical protein | - |
| E5D60_RS09935 () | 2068207..2068425 | - | 219 | WP_004940942.1 | hypothetical protein | - |
| E5D60_RS09940 () | 2068500..2068850 | - | 351 | WP_004940946.1 | hypothetical protein | - |
| E5D60_RS09945 () | 2069099..2069449 | + | 351 | WP_033633331.1 | DUF4377 domain-containing protein | - |
| E5D60_RS09950 () | 2069500..2069883 | - | 384 | WP_033633330.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|