MGE detailed information
MGE type: Conjugative plasmid MGE length: 89459 bp
Accession: NZ_CP038640 Location: 1..89459 Organism: Cupriavidus oxalaticus strain X32 Replicon: plasmid unnamed5
Accession: NZ_CP038640 Location: 1..89459 Organism: Cupriavidus oxalaticus strain X32 Replicon: plasmid unnamed5
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E0W60_RS36445 () | 280..1176 | + | 897 | WP_135707778.1 | HTH-type transcriptional regulator HdfR | VF |
| E0W60_RS36450 () | 1351..2705 | - | 1355 | Protein_2 | MFS transporter | - |
| E0W60_RS36455 () | 2739..3635 | + | 897 | Protein_3 | chloromuconate cycloisomerase | - |
| E0W60_RS36460 () | 3710..4414 | + | 705 | WP_011178384.1 | carboxymethylenebutenolidase | - |
| E0W60_RS36465 () | 4411..5475 | + | 1065 | WP_011178383.1 | maleylacetate reductase | - |
| E0W60_RS36470 () | 5820..7616 | + | 1797 | WP_011178382.1 | 2,4-dichlorophenol 6-monooxygenase | - |
| E0W60_RS36485 () | 8711..9283 | - | 573 | WP_007180433.1 | hypothetical protein | - |
| E0W60_RS36490 () | 9353..9796 | - | 444 | WP_135707780.1 | OB-fold domain-containing protein | - |
| E0W60_RS36495 () | 9793..10959 | - | 1167 | WP_135707782.1 | thiolase family protein | - |
| E0W60_RS36500 () | 10965..12506 | - | 1542 | WP_011178400.1 | AMP-binding protein | - |
| E0W60_RS36505 () | 12549..13412 | - | 864 | WP_135707784.1 | alpha-ketoglutarate-dependent 2,4-dichlorophenoxyacetate dioxygenase | - |
| E0W60_RS36510 () | 13619..14506 | + | 888 | WP_011178398.1 | HTH-type transcriptional regulator HdfR | VF |
| E0W60_RS36515 () | 14691..15530 | + | 840 | WP_011178397.1 | helix-turn-helix domain-containing protein | - |
| E0W60_RS36520 () | 15558..16733 | - | 1176 | Protein_14 | enoyl-CoA hydratase/isomerase family protein | - |
| E0W60_RS36525 () | 16733..17281 | - | 549 | Protein_15 | helix-turn-helix domain-containing protein | - |
| E0W60_RS36530 () | 17352..18428 | + | 1077 | WP_015061672.1 | aromatic ring-hydroxylating dioxygenase subunit alpha | - |
| E0W60_RS36535 () | 18425..18865 | - | 441 | WP_015061673.1 | OB-fold domain-containing protein | - |
| E0W60_RS36540 () | 18862..20028 | - | 1167 | WP_135707786.1 | thiolase family protein | - |
| E0W60_RS36545 () | 20034..21575 | - | 1542 | WP_015061675.1 | AMP-binding protein | - |
| E0W60_RS36550 () | 21597..22460 | - | 864 | WP_015061676.1 | TauD/TfdA family dioxygenase | - |
| E0W60_RS36555 () | 22477..23865 | - | 1389 | WP_015061677.1 | MFS transporter | - |
| E0W60_RS36560 () | 23919..25679 | - | 1761 | WP_015061678.1 | FAD-dependent monooxygenase | - |
| E0W60_RS36565 () | 25704..26783 | - | 1080 | WP_015061679.1 | maleylacetate reductase | - |
| E0W60_RS36570 () | 26784..27491 | - | 708 | WP_015061680.1 | dienelactone hydrolase family protein | - |
| E0W60_RS36575 () | 27513..28274 | - | 762 | WP_015061681.1 | chlorocatechol 1,2-dioxygenase | - |
| E0W60_RS36580 () | 28318..29517 | - | 1200 | WP_015061682.1 | muconate cycloisomerase family protein | - |
| E0W60_RS36585 () | 29629..30516 | + | 888 | WP_015061683.1 | HTH-type transcriptional regulator HdfR | VF |
| E0W60_RS36590 () | 30559..30840 | + | 282 | WP_015061684.1 | hypothetical protein | - |
| E0W60_RS36595 () | 30837..31031 | + | 195 | WP_135707788.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| E0W60_RS36600 () | 31115..32638 | + | 1524 | WP_005800234.1 | IS21 family transposase ISThsp19 | Transposase |
| E0W60_RS36605 () | 32628..33437 | + | 810 | WP_005800232.1 | IS21 family transposase ISPa63 | Transposase |
| E0W60_RS36610 () | 33543..33737 | - | 195 | WP_135707789.1 | hypothetical protein | - |
| E0W60_RS36615 () | 33809..34243 | + | 435 | WP_003131969.1 | mercury resistance transcriptional regulator MerR | - |
| E0W60_RS36620 () | 34356..35576 | - | 1221 | WP_011114072.1 | replication initiator protein A | - |
| E0W60_RS36625 () | 35623..35964 | - | 342 | WP_000019167.1 | single-stranded DNA-binding protein | - |
| E0W60_RS36630 () | 36078..36440 | + | 363 | WP_011114045.1 | transcriptional regulator | - |
| E0W60_RS36635 () | 36750..37712 | + | 963 | WP_000132020.1 | hypothetical protein | VF |
| E0W60_RS36640 () | 37729..38193 | + | 465 | WP_011114046.1 | conjugal transfer system pilin TrbC | - |
| E0W60_RS36645 () | 38197..38508 | + | 312 | WP_001207961.1 | conjugal transfer protein TrbD | - |
| E0W60_RS36650 () | 38505..41063 | + | 2559 | WP_011114047.1 | VirB4 family type IV secretion/conjugal transfer ATPase | - |
| E0W60_RS36655 () | 41060..41842 | + | 783 | WP_011114048.1 | conjugal transfer protein TrbF | - |
| E0W60_RS36660 () | 41860..42759 | + | 900 | WP_006122480.1 | P-type conjugative transfer protein TrbG | - |
| E0W60_RS36665 () | 42762..43250 | + | 489 | WP_006122479.1 | conjugal transfer protein TrbH | - |
| E0W60_RS36670 () | 43255..44676 | + | 1422 | WP_011114050.1 | hypothetical protein | VF |
| E0W60_RS36675 () | 44697..45461 | + | 765 | WP_010890135.1 | P-type conjugative transfer protein TrbJ | - |
| E0W60_RS36680 () | 45471..45698 | + | 228 | WP_000644148.1 | entry exclusion lipoprotein TrbK | - |
| E0W60_RS36685 () | 45709..47427 | + | 1719 | WP_011114051.1 | P-type conjugative transfer protein TrbL | - |
| E0W60_RS36690 () | 47445..48032 | + | 588 | WP_010890138.1 | conjugal transfer protein TrbM | - |
| E0W60_RS36695 () | 48046..48681 | + | 636 | WP_011114052.1 | hypothetical protein | VF |
| E0W60_RS36700 () | 48710..48976 | + | 267 | WP_010890140.1 | hypothetical protein | - |
| E0W60_RS36705 () | 48976..49674 | + | 699 | WP_011114053.1 | conjugal transfer protein TraX | - |
| E0W60_RS36710 () | 49690..50121 | + | 432 | WP_001665065.1 | hypothetical protein | VF |
| E0W60_RS36715 () | 50276..50950 | + | 675 | WP_011178411.1 | DNA methylase | - |
| E0W60_RS36720 () | 50952..51611 | - | 660 | WP_011178412.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| E0W60_RS36730 () | 52292..56638 | - | 4347 | WP_011114055.1 | DUF1738 domain-containing protein | - |
| E0W60_RS36735 () | 56642..57031 | - | 390 | WP_006122510.1 | protein TraD | - |
| E0W60_RS36740 () | 57053..59116 | - | 2064 | WP_011114056.1 | DNA topoisomerase III | - |
| E0W60_RS36745 () | 59128..59664 | - | 537 | WP_006122512.1 | conjugative transfer signal peptidase TraF | - |
| E0W60_RS36750 () | 59661..61574 | - | 1914 | WP_000694765.1 | Conjugal transfer protein TraG | VF |
| E0W60_RS36755 () | 61571..63811 | - | 2241 | WP_011114057.1 | Protein TraI | Relaxase |
| E0W60_RS36760 () | 63846..64220 | - | 375 | WP_000426567.1 | conjugal transfer transcriptional regulator TraJ | - |
| E0W60_RS36765 () | 64594..64992 | + | 399 | WP_001127128.1 | TraK family protein | - |
| E0W60_RS36770 () | 64992..65717 | + | 726 | WP_011114058.1 | protein TraL | - |
| E0W60_RS36775 () | 65717..66157 | + | 441 | WP_000718516.1 | conjugal transfer protein TraM | - |
| E0W60_RS36780 () | 66360..67013 | - | 654 | WP_000826922.1 | hypothetical protein | - |
| E0W60_RS36785 () | 67042..67389 | - | 348 | WP_000664557.1 | hypothetical protein | - |
| E0W60_RS36790 () | 67560..68591 | - | 1032 | WP_011114059.1 | DNA-binding protein | - |
| E0W60_RS36795 () | 68770..69819 | - | 1050 | WP_011114060.1 | ParB/RepB/Spo0J family partition protein | - |
| E0W60_RS36800 () | 69816..70580 | - | 765 | WP_011114061.1 | ParA family protein | - |
| E0W60_RS36805 () | 70577..70885 | - | 309 | WP_011114062.1 | KorA protein | - |
| E0W60_RS36810 () | 70992..71321 | - | 330 | WP_011114064.1 | DUF2761 domain-containing protein | - |
| E0W60_RS36815 () | 71323..71649 | - | 327 | WP_011114065.1 | hypothetical protein | - |
| E0W60_RS36820 () | 71858..72094 | - | 237 | WP_011114066.1 | stable inheritance protein KleA | - |
| E0W60_RS36825 () | 72252..72509 | - | 258 | WP_011114067.1 | hypothetical protein | - |
| E0W60_RS36830 () | 72526..73734 | - | 1209 | WP_011114068.1 | hypothetical protein | - |
| E0W60_RS36835 () | 73746..74009 | - | 264 | WP_011296181.1 | hypothetical protein | - |
| E0W60_RS36840 () | 74009..74437 | - | 429 | WP_011114069.1 | antirestriction protein | - |
| E0W60_RS36845 () | 74610..74873 | + | 264 | WP_011114070.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| E0W60_RS36850 () | 74860..75141 | + | 282 | WP_011114071.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| E0W60_RS36870 () | 76462..78153 | - | 1692 | WP_007180429.1 | site-specific integrase | - |
| E0W60_RS36875 () | 78297..81323 | + | 3027 | WP_007181927.1 | Tn3 family transposase TnpA_ISPsy30 | Transposase |
| E0W60_RS37285 () | 81320..81682 | + | 363 | WP_156903410.1 | hypothetical protein | - |
| E0W60_RS37290 () | 81679..81942 | + | 264 | WP_007180432.1 | hypothetical protein | - |
| E0W60_RS36885 () | 82019..82591 | + | 573 | WP_007180433.1 | hypothetical protein | - |
| E0W60_RS36900 () | 83686..85482 | - | 1797 | WP_011178382.1 | 2,4-dichlorophenol 6-monooxygenase | - |
| E0W60_RS36905 () | 85827..86891 | - | 1065 | WP_011178383.1 | maleylacetate reductase | - |
| E0W60_RS36910 () | 86888..87592 | - | 705 | WP_011178384.1 | carboxymethylenebutenolidase | - |
| E0W60_RS36915 () | 87667..88779 | - | 1113 | WP_011178385.1 | chloromuconate cycloisomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|