MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 92027 bp
Accession: NZ_CP038506 Location: 1..92027 Organism: Escherichia coli strain 28Eco12 Replicon: plasmid p28Eco12
Accession: NZ_CP038506 Location: 1..92027 Organism: Escherichia coli strain 28Eco12 Replicon: plasmid p28Eco12
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DC440_RS26405 () | 1..678 | + | 678 | WP_001354545.1 | metallophosphoesterase | - |
| DC440_RS26410 () | 675..1376 | + | 702 | WP_000684845.1 | hypothetical protein | - |
| DC440_RS26420 () | 1678..2940 | + | 1263 | WP_041124256.1 | hypothetical protein | - |
| DC440_RS26425 () | 3013..3519 | + | 507 | WP_000021755.1 | hypothetical protein | - |
| DC440_RS26430 () | 3714..4442 | + | 729 | WP_053276284.1 | hypothetical protein | - |
| DC440_RS26435 () | 4526..4729 | + | 204 | WP_000158002.1 | hypothetical protein | - |
| DC440_RS26440 () | 4722..4961 | + | 240 | WP_001571182.1 | hypothetical protein | - |
| DC440_RS26445 () | 4958..5602 | + | 645 | WP_023351699.1 | hypothetical protein | - |
| DC440_RS27270 () | 5599..6042 | + | 444 | Protein_9 | ead/Ea22-like family protein | - |
| DC440_RS27275 () | 6193..6465 | + | 273 | Protein_10 | ead/Ea22-like family protein | - |
| DC440_RS26455 () | 6462..6752 | + | 291 | WP_053276283.1 | DUF4752 family protein | - |
| DC440_RS26460 () | 6749..7483 | + | 735 | WP_060579177.1 | hypothetical protein | - |
| DC440_RS26470 () | 7691..8002 | + | 312 | WP_001002676.1 | hypothetical protein | - |
| DC440_RS26475 () | 8130..8348 | + | 219 | WP_000209147.1 | DUF4014 family protein | - |
| DC440_RS26480 () | 8350..8613 | + | 264 | WP_000224233.1 | hypothetical protein | - |
| DC440_RS26485 () | 8624..9622 | + | 999 | WP_060579178.1 | hypothetical protein | - |
| DC440_RS26495 () | 9895..10155 | + | 261 | WP_131728164.1 | hypothetical protein | - |
| DC440_RS26505 () | 10516..11040 | + | 525 | WP_000159954.1 | toprim domain-containing protein | - |
| DC440_RS26510 () | 11167..11523 | - | 357 | WP_001062545.1 | hypothetical protein | - |
| DC440_RS26515 () | 11524..12108 | - | 585 | WP_032272826.1 | hypothetical protein | - |
| DC440_RS26520 () | 12283..12672 | + | 390 | WP_000506726.1 | DNA repair protein | - |
| DC440_RS26525 () | 12745..12966 | + | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| DC440_RS26530 () | 12966..13346 | + | 381 | WP_060579179.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| DC440_RS26535 () | 13351..13530 | + | 180 | WP_060579180.1 | hypothetical protein | - |
| DC440_RS26540 () | 13558..14601 | + | 1044 | WP_060579181.1 | DUF968 domain-containing protein | - |
| DC440_RS26545 () | 14690..15142 | + | 453 | WP_001312282.1 | late promoter-activating protein (Gp10) | - |
| DC440_RS26550 () | 15229..16422 | + | 1194 | WP_000219605.1 | terminase | - |
| DC440_RS26555 () | 16422..17906 | + | 1485 | WP_000124159.1 | hypothetical protein | - |
| DC440_RS26560 () | 17931..18782 | - | 852 | WP_000611656.1 | hypothetical protein | - |
| DC440_RS26565 () | 18893..19102 | - | 210 | WP_000874154.1 | hypothetical protein | - |
| DC440_RS26580 () | 19707..19928 | + | 222 | WP_000542338.1 | hypothetical protein | - |
| DC440_RS26585 () | 19936..20967 | + | 1032 | WP_135560416.1 | site-specific integrase | - |
| DC440_RS26590 () | 21018..21329 | + | 312 | WP_001224246.1 | hypothetical protein | - |
| DC440_RS26595 () | 21577..22137 | + | 561 | WP_015974227.1 | Ref family protein | - |
| DC440_RS26600 () | 22216..22968 | + | 753 | WP_072201603.1 | hypothetical protein | - |
| DC440_RS26605 () | 23001..23951 | - | 951 | WP_111952764.1 | DUF4935 domain-containing protein | - |
| DC440_RS26610 () | 24013..24261 | - | 249 | WP_000747846.1 | hypothetical protein | - |
| DC440_RS26615 () | 24258..24698 | - | 441 | WP_000224043.1 | hypothetical protein | - |
| DC440_RS26620 () | 24732..31499 | - | 6768 | WP_060579130.1 | N-6 DNA methylase | - |
| DC440_RS26625 () | 31575..33284 | + | 1710 | WP_060579129.1 | hypothetical protein | - |
| DC440_RS26630 () | 33277..34296 | + | 1020 | WP_000132937.1 | head processing protein | - |
| DC440_RS26640 () | 34588..35145 | - | 558 | WP_001345478.1 | lysozyme | - |
| DC440_RS26645 () | 35315..35803 | + | 489 | WP_023351452.1 | single-stranded DNA-binding protein | - |
| DC440_RS26650 () | 36006..36794 | + | 789 | WP_050196854.1 | hypothetical protein | - |
| DC440_RS26655 () | 36787..37881 | + | 1095 | WP_023155275.1 | hypothetical protein | - |
| DC440_RS26660 () | 37913..38221 | - | 309 | WP_001165936.1 | hypothetical protein | - |
| DC440_RS26665 () | 38211..41198 | - | 2988 | WP_050196853.1 | hypothetical protein | - |
| DC440_RS26670 () | 41211..41576 | - | 366 | WP_000175491.1 | hypothetical protein | - |
| DC440_RS26675 () | 41573..43492 | - | 1920 | WP_050196852.1 | hypothetical protein | - |
| DC440_RS26680 () | 43494..44096 | - | 603 | WP_001345482.1 | hypothetical protein | - |
| DC440_RS26685 () | 44083..44526 | - | 444 | WP_000580770.1 | hypothetical protein | - |
| DC440_RS26690 () | 44523..44852 | - | 330 | WP_000887652.1 | holin | - |
| DC440_RS26695 () | 44927..45190 | - | 264 | WP_000145199.1 | hypothetical protein | - |
| DC440_RS26705 () | 45626..46198 | - | 573 | WP_001165547.1 | Tn3 family transposase TnpR_TnShfr1 | Transposase |
| DC440_RS27280 () | 46914..47030 | - | 117 | Protein_55 | tail fiber protein | - |
| DC440_RS27200 () | 47343..47930 | - | 588 | Protein_56 | tail fiber protein | - |
| DC440_RS27205 () | 47949..48698 | - | 750 | Protein_57 | tail fiber protein | - |
| DC440_RS26715 () | 48710..49144 | - | 435 | WP_001286325.1 | hypothetical protein | - |
| DC440_RS26720 () | 49223..50059 | - | 837 | WP_001189832.1 | hypothetical protein | - |
| DC440_RS26725 () | 50059..51492 | - | 1434 | WP_050196865.1 | bleomycin hydrolase | - |
| DC440_RS26730 () | 51489..51845 | - | 357 | WP_000002800.1 | hypothetical protein | - |
| DC440_RS26735 () | 51845..55534 | - | 3690 | WP_135560418.1 | transglycosylase SLT domain-containing protein | - |
| DC440_RS26740 () | 55616..56497 | - | 882 | WP_050196864.1 | hypothetical protein | - |
| DC440_RS26745 () | 56512..57123 | - | 612 | WP_000523980.1 | hypothetical protein | - |
| DC440_RS26750 () | 57134..57700 | - | 567 | WP_050196863.1 | hypothetical protein | - |
| DC440_RS26755 () | 57910..58689 | - | 780 | WP_048266593.1 | hypothetical protein | - |
| DC440_RS26760 () | 58697..59014 | - | 318 | WP_000908460.1 | hypothetical protein | - |
| DC440_RS26770 () | 59595..59816 | + | 222 | WP_000245703.1 | host cell division inhibitor Icd-like protein | - |
| DC440_RS26775 () | 59813..60847 | + | 1035 | WP_061819307.1 | phage antirepressor KilAC domain-containing protein | - |
| DC440_RS26780 () | 61012..61812 | + | 801 | WP_060578993.1 | phage antirepressor KilAC domain-containing protein | - |
| DC440_RS26785 () | 61842..62687 | + | 846 | WP_033560572.1 | hypothetical protein | - |
| DC440_RS26790 () | 62738..62983 | + | 246 | WP_001426344.1 | hypothetical protein | - |
| DC440_RS26795 () | 63166..63762 | - | 597 | WP_000268409.1 | hypothetical protein | - |
| DC440_RS26800 () | 63934..64443 | - | 510 | WP_000509939.1 | hypothetical protein | - |
| DC440_RS26805 () | 64455..65036 | - | 582 | WP_000035304.1 | hypothetical protein | - |
| DC440_RS26810 () | 65072..65887 | - | 816 | WP_000041756.1 | hypothetical protein | - |
| DC440_RS26815 () | 65897..67486 | - | 1590 | WP_000085145.1 | hypothetical protein | - |
| DC440_RS26820 () | 67547..69253 | - | 1707 | WP_000067710.1 | hypothetical protein | - |
| DC440_RS26825 () | 69479..70480 | - | 1002 | WP_000038866.1 | ParB/RepB/Spo0J family partition protein | - |
| DC440_RS26830 () | 70497..71693 | - | 1197 | WP_023153704.1 | AAA family ATPase | - |
| DC440_RS26840 () | 72251..73111 | - | 861 | WP_001076427.1 | replication protein RepA | - |
| DC440_RS26845 () | 73438..73839 | - | 402 | WP_000458377.1 | hypothetical protein | - |
| DC440_RS26850 () | 73910..74269 | - | 360 | WP_001281923.1 | hypothetical protein | - |
| DC440_RS27210 () | 74281..74421 | - | 141 | WP_000336811.1 | hypothetical protein | - |
| DC440_RS26855 () | 74447..74869 | - | 423 | WP_060579168.1 | hypothetical protein | - |
| DC440_RS26860 () | 74909..75697 | - | 789 | WP_000890207.1 | hypothetical protein | - |
| DC440_RS26870 () | 76159..76443 | + | 285 | WP_001177862.1 | hypothetical protein | - |
| DC440_RS26875 () | 76436..77341 | + | 906 | WP_000472529.1 | recombination-associated protein RdgC | - |
| DC440_RS26880 () | 77338..79356 | + | 2019 | WP_000660970.1 | Dam family site-specific DNA-(adenine-N6)-methyltransferase | - |
| DC440_RS26915 () | 81331..82158 | + | 828 | WP_000751808.1 | hypothetical protein | - |
| DC440_RS26930 () | 82548..83912 | + | 1365 | WP_001276603.1 | replicative DNA helicase | - |
| DC440_RS26935 () | 83912..84910 | + | 999 | WP_001198660.1 | hypothetical protein | - |
| DC440_RS26940 () | 84957..85589 | - | 633 | WP_000535202.1 | baseplate protein | - |
| DC440_RS26945 () | 85582..86598 | - | 1017 | WP_000212018.1 | hypothetical protein | - |
| DC440_RS26950 () | 86600..87385 | - | 786 | WP_060578999.1 | hypothetical protein | - |
| DC440_RS26955 () | 87372..88100 | - | 729 | WP_000896796.1 | hypothetical protein | - |
| DC440_RS26960 () | 88104..89321 | - | 1218 | WP_001141908.1 | hypothetical protein | - |
| DC440_RS26965 () | 89331..89708 | - | 378 | WP_000235786.1 | hypothetical protein | - |
| DC440_RS26970 () | 89855..90100 | + | 246 | WP_000840931.1 | hypothetical protein | - |
| DC440_RS26975 () | 90103..90681 | + | 579 | WP_000943608.1 | VRR-NUC domain-containing protein | - |
| DC440_RS26980 () | 90748..90903 | + | 156 | WP_000096174.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|